RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 GMLQ99445 158 aa20.28■□□□□ 0.84
USHBP1-210ENST00000600286 ADARB2Q9NS39 739 aaKnown RBP20.28■□□□□ 0.84
USHBP1-210ENST00000600286 PAG1Q9NWQ8 432 aa20.28■□□□□ 0.84
USHBP1-210ENST00000600286 AOX1Q06278 1338 aa20.27■□□□□ 0.84
USHBP1-210ENST00000600286 GOLIM4O00461 696 aa20.27■□□□□ 0.84
USHBP1-210ENST00000600286 CYP2E1P05181 493 aaPredicted RBP20.27■□□□□ 0.84
USHBP1-210ENST00000600286 LDHCP07864 332 aa20.27■□□□□ 0.84
USHBP1-210ENST00000600286 SCNN1DP51172 638 aa20.27■□□□□ 0.84
USHBP1-210ENST00000600286 TMED8Q6PL24 325 aaPredicted RBP20.27■□□□□ 0.84
USHBP1-210ENST00000600286 PI16Q6UXB8 463 aa20.27■□□□□ 0.84
USHBP1-210ENST00000600286 CERS5Q8N5B7 392 aa20.27■□□□□ 0.84
USHBP1-210ENST00000600286 JMYQ8N9B5 988 aa20.27■□□□□ 0.84
USHBP1-210ENST00000600286 OTUD7AQ8TE49 926 aaPredicted RBP20.27■□□□□ 0.84
USHBP1-210ENST00000600286 KLRG1Q96E93 195 aa20.27■□□□□ 0.84
USHBP1-210ENST00000600286 MRIQ9BWK5 157 aa20.27■□□□□ 0.84
USHBP1-210ENST00000600286 POTEIP0CG38 1075 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 POTEJP0CG39 1038 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 EPHX2P34913 555 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 EPS15P42566 896 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 HDLBPQ00341 1268 aaKnown RBP20.26■□□□□ 0.83
USHBP1-210ENST00000600286 DLGAP5Q15398 846 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 ZSCAN25Q6NSZ9 544 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 TBC1D9Q6ZT07 1266 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 PLEKHM2Q8IWE5 1019 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 TEKT1Q969V4 418 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.26■□□□□ 0.83
USHBP1-210ENST00000600286 OSBPL3Q9H4L5 887 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 SERPINA10Q9UK55 444 aa20.26■□□□□ 0.83
USHBP1-210ENST00000600286 IDH1O75874 414 aaKnown RBP20.25■□□□□ 0.83
USHBP1-210ENST00000600286 ZNF280AP59817 542 aaPredicted RBP20.25■□□□□ 0.83
USHBP1-210ENST00000600286 RBM26Q5T8P6 1007 aaKnown RBP20.25■□□□□ 0.83
USHBP1-210ENST00000600286 TSHZ3Q63HK5 1081 aa20.25■□□□□ 0.83
USHBP1-210ENST00000600286 USP50Q70EL3 339 aaPredicted RBP20.25■□□□□ 0.83
USHBP1-210ENST00000600286 NOL10Q9BSC4 688 aaKnown RBP20.25■□□□□ 0.83
USHBP1-210ENST00000600286 MYOZ2Q9NPC6 264 aa20.25■□□□□ 0.83
USHBP1-210ENST00000600286 MYO1BO43795 1136 aa20.24■□□□□ 0.83
USHBP1-210ENST00000600286 PRDX5P30044 214 aa20.24■□□□□ 0.83
USHBP1-210ENST00000600286 PI4K2BQ8TCG2 481 aa20.24■□□□□ 0.83
USHBP1-210ENST00000600286 TAF1DQ9H5J8 278 aaPredicted RBP20.24■□□□□ 0.83
USHBP1-210ENST00000600286 SALL3Q9BXA9 1300 aa20.24■□□□□ 0.83
USHBP1-210ENST00000600286 TRIM6-TRIM34B2RNG4 842 aa20.23■□□□□ 0.83
USHBP1-210ENST00000600286 CFAP100Q494V2 611 aa20.23■□□□□ 0.83
USHBP1-210ENST00000600286 TBC1D10BQ4KMP7 808 aaPredicted RBP20.23■□□□□ 0.83
USHBP1-210ENST00000600286 EAPPQ56P03 285 aaPredicted RBP20.23■□□□□ 0.83
USHBP1-210ENST00000600286 NAA16Q6N069 864 aaPredicted RBP20.23■□□□□ 0.83
USHBP1-210ENST00000600286 CLEC11AQ9Y240 323 aa20.23■□□□□ 0.83
USHBP1-210ENST00000600286 NDUFB9Q9Y6M9 179 aa20.23■□□□□ 0.83
USHBP1-210ENST00000600286 CRKP46108 304 aa20.22■□□□□ 0.83
USHBP1-210ENST00000600286 KIF4BQ2VIQ3 1234 aa20.22■□□□□ 0.83
USHBP1-210ENST00000600286 HHIPL2Q6UWX4 724 aa20.22■□□□□ 0.83
USHBP1-210ENST00000600286 CNTROBQ8N137 903 aa20.22■□□□□ 0.83
USHBP1-210ENST00000600286 EVI5LQ96CN4 794 aa20.22■□□□□ 0.83
USHBP1-210ENST00000600286 PIH1D3Q9NQM4 214 aaKnown RBP20.22■□□□□ 0.83
USHBP1-210ENST00000600286 SCN9AQ15858 1988 aa20.22■□□□□ 0.83
USHBP1-210ENST00000600286 COL1A1P02452 1464 aaPredicted RBP20.22■□□□□ 0.83
USHBP1-210ENST00000600286 PDE4AP27815 886 aa20.21■□□□□ 0.83
USHBP1-210ENST00000600286 MECOMQ03112 1051 aa20.21■□□□□ 0.83
USHBP1-210ENST00000600286 SAMD7Q7Z3H4 446 aa20.21■□□□□ 0.83
USHBP1-210ENST00000600286 MTMR14Q8NCE2 650 aa20.21■□□□□ 0.83
USHBP1-210ENST00000600286 ANTXR1Q9H6X2 564 aa20.21■□□□□ 0.83
USHBP1-210ENST00000600286 BAG3O95817 575 aa20.2■□□□□ 0.82
USHBP1-210ENST00000600286 MAP4K4O95819 1239 aaPredicted RBP20.2■□□□□ 0.82
USHBP1-210ENST00000600286 GRIK5Q16478 980 aa20.2■□□□□ 0.82
USHBP1-210ENST00000600286 SLC9C2Q5TAH2 1124 aa20.2■□□□□ 0.82
USHBP1-210ENST00000600286 CHADLQ6NUI6 762 aa20.2■□□□□ 0.82
USHBP1-210ENST00000600286 KBTBD3Q8NAB2 608 aa20.2■□□□□ 0.82
USHBP1-210ENST00000600286 RILPL2Q969X0 211 aa20.2■□□□□ 0.82
USHBP1-210ENST00000600286 NSUN4Q96CB9 384 aaKnown RBP20.2■□□□□ 0.82
USHBP1-210ENST00000600286 FSD1Q9BTV5 496 aa20.2■□□□□ 0.82
USHBP1-210ENST00000600286 GTF3C3Q9Y5Q9 886 aa20.2■□□□□ 0.82
USHBP1-210ENST00000600286 PASKQ96RG2 1323 aa20.2■□□□□ 0.82
USHBP1-210ENST00000600286 ZFYP08048 801 aaPredicted RBP20.19■□□□□ 0.82
USHBP1-210ENST00000600286 CYP7A1P22680 504 aa20.19■□□□□ 0.82
USHBP1-210ENST00000600286 TICAM2Q86XR7 235 aa20.19■□□□□ 0.82
USHBP1-210ENST00000600286 CERS3Q8IU89 383 aa20.19■□□□□ 0.82
USHBP1-210ENST00000600286 ZC3H15Q8WU90 426 aaKnown RBP20.19■□□□□ 0.82
USHBP1-210ENST00000600286 FAM163AQ96GL9 167 aaPredicted RBP20.19■□□□□ 0.82
USHBP1-210ENST00000600286 ZDHHC15Q96MV8 337 aa20.19■□□□□ 0.82
USHBP1-210ENST00000600286 TMOD2Q9NZR1 351 aa20.19■□□□□ 0.82
USHBP1-210ENST00000600286 SHTN1A0MZ66 631 aa20.18■□□□□ 0.82
USHBP1-210ENST00000600286 RGS3P49796 1198 aa20.18■□□□□ 0.82
USHBP1-210ENST00000600286 MAGEB6Q8N7X4 407 aa20.18■□□□□ 0.82
USHBP1-210ENST00000600286 DCPSQ96C86 337 aaKnown RBP20.18■□□□□ 0.82
USHBP1-210ENST00000600286 EDC3Q96F86 508 aaKnown RBP20.18■□□□□ 0.82
USHBP1-210ENST00000600286 PSME4Q14997 1843 aa20.18■□□□□ 0.82
USHBP1-210ENST00000600286 SPDYE2BA6NHP3 402 aa20.17■□□□□ 0.82
USHBP1-210ENST00000600286 SPDYE6P0CI01 402 aa20.17■□□□□ 0.82
USHBP1-210ENST00000600286 PLCG2P16885 1265 aa20.17■□□□□ 0.82
USHBP1-210ENST00000600286 DIXDC1Q155Q3 683 aa20.17■□□□□ 0.82
USHBP1-210ENST00000600286 LDHDQ86WU2 507 aa20.17■□□□□ 0.82
USHBP1-210ENST00000600286 TRPM4Q8TD43 1214 aa20.17■□□□□ 0.82
USHBP1-210ENST00000600286 MROH7-TTC4A0A0A0MT08 1334 aa20.17■□□□□ 0.82
USHBP1-210ENST00000600286 MYH13Q9UKX3 1938 aa20.17■□□□□ 0.82
USHBP1-210ENST00000600286 WNT10BO00744 389 aa20.16■□□□□ 0.82
USHBP1-210ENST00000600286 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
USHBP1-210ENST00000600286 TTC22Q5TAA0 569 aa20.16■□□□□ 0.82
USHBP1-210ENST00000600286 IFFO2Q5TF58 517 aa20.16■□□□□ 0.82
USHBP1-210ENST00000600286 HIP1O00291 1037 aa20.15■□□□□ 0.82
USHBP1-210ENST00000600286 RNF113AO15541 343 aaKnown RBP20.15■□□□□ 0.82
USHBP1-210ENST00000600286 PDE6AP16499 860 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms