RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 TEKT1Q969V4 418 aa14.29□□□□□ -0.12
HIF3A-217ENST00000600236 TDRD3Q9H7E2 651 aaKnown RBP14.29□□□□□ -0.12
HIF3A-217ENST00000600236 TMOD2Q9NZR1 351 aa14.29□□□□□ -0.12
HIF3A-217ENST00000600236 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-217ENST00000600236 FBXO3Q9UK99 471 aa14.29□□□□□ -0.12
HIF3A-217ENST00000600236 IQSEC3Q9UPP2 1182 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-217ENST00000600236 SUGT1Q9Y2Z0 365 aa14.29□□□□□ -0.12
HIF3A-217ENST00000600236 RGS19P49795 217 aa14.28□□□□□ -0.12
HIF3A-217ENST00000600236 NBPF12Q5TAG4 269 aaPredicted RBP14.28□□□□□ -0.12
HIF3A-217ENST00000600236 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
HIF3A-217ENST00000600236 ZNF296Q8WUU4 475 aaPredicted RBP14.28□□□□□ -0.12
HIF3A-217ENST00000600236 LPIN2Q92539 896 aa14.28□□□□□ -0.12
HIF3A-217ENST00000600236 WNK4Q96J92 1243 aa14.28□□□□□ -0.12
HIF3A-217ENST00000600236 CFHR5Q9BXR6 569 aa14.28□□□□□ -0.12
HIF3A-217ENST00000600236 FZD1Q9UP38 647 aa14.28□□□□□ -0.12
HIF3A-217ENST00000600236 SSC5DA1L4H1 1573 aa14.27□□□□□ -0.12
HIF3A-217ENST00000600236 GPR25O00155 361 aa14.27□□□□□ -0.13
HIF3A-217ENST00000600236 BCAMP50895 628 aa14.27□□□□□ -0.13
HIF3A-217ENST00000600236 OTUD7BQ6GQQ9 843 aa14.27□□□□□ -0.13
HIF3A-217ENST00000600236 NOB1Q9ULX3 412 aaKnown RBP14.27□□□□□ -0.13
HIF3A-217ENST00000600236 CASP8AP2Q9UKL3 1982 aa14.26□□□□□ -0.13
HIF3A-217ENST00000600236 AKAP11Q9UKA4 1901 aa14.26□□□□□ -0.13
HIF3A-217ENST00000600236 TCP10L2B9ZVM9 353 aa14.26□□□□□ -0.13
HIF3A-217ENST00000600236 FKTNO75072 461 aa14.26□□□□□ -0.13
HIF3A-217ENST00000600236 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-217ENST00000600236 FGFR2P21802 821 aa14.26□□□□□ -0.13
HIF3A-217ENST00000600236 RFX5P48382 616 aaPredicted RBP14.26□□□□□ -0.13
HIF3A-217ENST00000600236 WDR66Q8TBY9 1149 aa14.26□□□□□ -0.13
HIF3A-217ENST00000600236 HOOK2Q96ED9 719 aa14.26□□□□□ -0.13
HIF3A-217ENST00000600236 CLMNQ96JQ2 1002 aa14.26□□□□□ -0.13
HIF3A-217ENST00000600236 MRIQ9BWK5 157 aa14.26□□□□□ -0.13
HIF3A-217ENST00000600236 GNL3LQ9NVN8 582 aaKnown RBP14.26□□□□□ -0.13
HIF3A-217ENST00000600236 AOX1Q06278 1338 aa14.25□□□□□ -0.13
HIF3A-217ENST00000600236 CIAO1O76071 339 aa14.25□□□□□ -0.13
HIF3A-217ENST00000600236 IFNL1Q8IU54 200 aa14.25□□□□□ -0.13
HIF3A-217ENST00000600236 CEP126Q9P2H0 1117 aa14.25□□□□□ -0.13
HIF3A-217ENST00000600236 ARHGAP45Q92619 1136 aa14.24□□□□□ -0.13
HIF3A-217ENST00000600236 ZDHHC15Q96MV8 337 aa14.24□□□□□ -0.13
HIF3A-217ENST00000600236 SIL1Q9H173 461 aa14.24□□□□□ -0.13
HIF3A-217ENST00000600236 CSADQ9Y600 493 aa14.24□□□□□ -0.13
HIF3A-217ENST00000600236 ECM29Q5VYK3 1845 aa14.24□□□□□ -0.13
HIF3A-217ENST00000600236 ARAP2Q8WZ64 1704 aa14.24□□□□□ -0.13
HIF3A-217ENST00000600236 IL15P40933 162 aaPredicted RBP14.23□□□□□ -0.13
HIF3A-217ENST00000600236 RARSP54136 660 aaKnown RBP14.23□□□□□ -0.13
HIF3A-217ENST00000600236 MAP3K9P80192 1104 aa14.23□□□□□ -0.13
HIF3A-217ENST00000600236 ATP2B3Q16720 1220 aa14.23□□□□□ -0.13
HIF3A-217ENST00000600236 HHIPL2Q6UWX4 724 aa14.23□□□□□ -0.13
HIF3A-217ENST00000600236 TMEM39BQ9GZU3 492 aa14.23□□□□□ -0.13
HIF3A-217ENST00000600236 ELP3Q9H9T3 547 aa14.23□□□□□ -0.13
HIF3A-217ENST00000600236 HPS5Q9UPZ3 1129 aa14.23□□□□□ -0.13
HIF3A-217ENST00000600236 LRRFIP2Q9Y608 721 aaKnown RBP14.23□□□□□ -0.13
HIF3A-217ENST00000600236 IPO8O15397 1037 aaKnown RBP14.22□□□□□ -0.13
HIF3A-217ENST00000600236 GNAI3P08754 354 aa14.22□□□□□ -0.13
HIF3A-217ENST00000600236 GRIK5Q16478 980 aa14.22□□□□□ -0.13
HIF3A-217ENST00000600236 FKBP1CQ5VVH2 108 aa14.22□□□□□ -0.13
HIF3A-217ENST00000600236 FBXO46Q6PJ61 603 aaPredicted RBP14.22□□□□□ -0.13
HIF3A-217ENST00000600236 ATG9AQ7Z3C6 839 aa14.22□□□□□ -0.13
HIF3A-217ENST00000600236 FAM83AQ86UY5 434 aa14.22□□□□□ -0.13
HIF3A-217ENST00000600236 OPTNQ96CV9 577 aa14.22□□□□□ -0.13
HIF3A-217ENST00000600236 TEPSINQ96N21 525 aa14.22□□□□□ -0.13
HIF3A-217ENST00000600236 IGF2BP3O00425 579 aaKnown RBP eCLIP14.21□□□□□ -0.13
HIF3A-217ENST00000600236 SEMA3EO15041 775 aa14.21□□□□□ -0.13
HIF3A-217ENST00000600236 WDHD1O75717 1129 aaPredicted RBP14.21□□□□□ -0.13
HIF3A-217ENST00000600236 SOX10P56693 466 aa14.21□□□□□ -0.13
HIF3A-217ENST00000600236 DCAF15Q66K64 600 aa14.21□□□□□ -0.13
HIF3A-217ENST00000600236 DENND2AQ9ULE3 1009 aa14.21□□□□□ -0.13
HIF3A-217ENST00000600236 TESPA1A2RU30 521 aaPredicted RBP14.2□□□□□ -0.14
HIF3A-217ENST00000600236 GTF2A2P52657 109 aa14.2□□□□□ -0.14
HIF3A-217ENST00000600236 CACNB3P54284 484 aa14.2□□□□□ -0.14
HIF3A-217ENST00000600236 VGLL4Q14135 290 aa14.2□□□□□ -0.14
HIF3A-217ENST00000600236 INTS3Q68E01 1043 aaKnown RBP14.2□□□□□ -0.14
HIF3A-217ENST00000600236 APOBEC3HQ6NTF7 200 aaKnown RBP14.2□□□□□ -0.14
HIF3A-217ENST00000600236 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.2□□□□□ -0.14
HIF3A-217ENST00000600236 ZGPATQ8N5A5 531 aaKnown RBP14.2□□□□□ -0.14
HIF3A-217ENST00000600236 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.2□□□□□ -0.14
HIF3A-217ENST00000600236 ERO1AQ96HE7 468 aa14.2□□□□□ -0.14
HIF3A-217ENST00000600236 MEIS3Q99687 375 aa14.2□□□□□ -0.14
HIF3A-217ENST00000600236 COPRSQ9NQ92 184 aa14.2□□□□□ -0.14
HIF3A-217ENST00000600236 RPAP1Q9BWH6 1393 aaPredicted RBP14.2□□□□□ -0.14
HIF3A-217ENST00000600236 LDHBP07195 334 aaKnown RBP14.19□□□□□ -0.14
HIF3A-217ENST00000600236 GJA5P36382 358 aa14.19□□□□□ -0.14
HIF3A-217ENST00000600236 CDAN1Q8IWY9 1227 aa14.19□□□□□ -0.14
HIF3A-217ENST00000600236 WRNIP1Q96S55 665 aa14.19□□□□□ -0.14
HIF3A-217ENST00000600236 R3HDMLQ9H3Y0 253 aa14.19□□□□□ -0.14
HIF3A-217ENST00000600236 AKAP2Q9Y2D5 859 aa14.19□□□□□ -0.14
HIF3A-217ENST00000600236 TRIM17Q9Y577 477 aa14.19□□□□□ -0.14
HIF3A-217ENST00000600236 SALL1Q9NSC2 1324 aa14.18□□□□□ -0.14
HIF3A-217ENST00000600236 CCL15-CCL14A0A0B4J2E2 113 aa14.18□□□□□ -0.14
HIF3A-217ENST00000600236 SRGAP3O43295 1099 aa14.18□□□□□ -0.14
HIF3A-217ENST00000600236 CRHR2Q13324 411 aa14.18□□□□□ -0.14
HIF3A-217ENST00000600236 CCL15Q16663 113 aa14.18□□□□□ -0.14
HIF3A-217ENST00000600236 ERO1BQ86YB8 467 aa14.18□□□□□ -0.14
HIF3A-217ENST00000600236 OTUD5Q96G74 571 aa14.18□□□□□ -0.14
HIF3A-217ENST00000600236 ZNF341Q9BYN7 854 aa14.18□□□□□ -0.14
HIF3A-217ENST00000600236 ZFYVE28Q9HCC9 887 aa14.18□□□□□ -0.14
HIF3A-217ENST00000600236 PA2G4Q9UQ80 394 aaKnown RBP14.18□□□□□ -0.14
HIF3A-217ENST00000600236 SPDYE5A6NIY4 337 aa14.17□□□□□ -0.14
HIF3A-217ENST00000600236 ZBTB22O15209 634 aa14.17□□□□□ -0.14
HIF3A-217ENST00000600236 PRDX5P30044 214 aa14.17□□□□□ -0.14
HIF3A-217ENST00000600236 ARHGEF6Q15052 776 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms