RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 RABL6Q3YEC7 729 aaPredicted RBP21.65■■□□□ 1.06
SMG9-210ENST00000600097 FBXO33Q7Z6M2 555 aa21.65■■□□□ 1.06
SMG9-210ENST00000600097 TBC1D22AQ8WUA7 517 aa21.65■■□□□ 1.06
SMG9-210ENST00000600097 TEPSINQ96N21 525 aa21.65■■□□□ 1.06
SMG9-210ENST00000600097 ELP3Q9H9T3 547 aa21.65■■□□□ 1.06
SMG9-210ENST00000600097 TCP10L2B9ZVM9 353 aa21.64■■□□□ 1.05
SMG9-210ENST00000600097 SP3Q02447 781 aa21.64■■□□□ 1.05
SMG9-210ENST00000600097 CAVIN4Q5BKX8 364 aa21.64■■□□□ 1.05
SMG9-210ENST00000600097 PTPN18Q99952 460 aa21.64■■□□□ 1.05
SMG9-210ENST00000600097 PTPN22Q9Y2R2 807 aa21.64■■□□□ 1.05
SMG9-210ENST00000600097 FRAT2O75474 233 aaPredicted RBP21.63■■□□□ 1.05
SMG9-210ENST00000600097 MAP3K9P80192 1104 aa21.63■■□□□ 1.05
SMG9-210ENST00000600097 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.63■■□□□ 1.05
SMG9-210ENST00000600097 FAM9BQ8IZU0 186 aa21.63■■□□□ 1.05
SMG9-210ENST00000600097 CD99L2Q8TCZ2 262 aa21.63■■□□□ 1.05
SMG9-210ENST00000600097 MS4A4AQ96JQ5 239 aa21.63■■□□□ 1.05
SMG9-210ENST00000600097 TMEM39BQ9GZU3 492 aa21.63■■□□□ 1.05
SMG9-210ENST00000600097 BICC1Q9H694 974 aaKnown RBP21.63■■□□□ 1.05
SMG9-210ENST00000600097 EFCC1Q9HA90 598 aa21.63■■□□□ 1.05
SMG9-210ENST00000600097 CSADQ9Y600 493 aa21.63■■□□□ 1.05
SMG9-210ENST00000600097 METTL24Q5JXM2 366 aa21.62■■□□□ 1.05
SMG9-210ENST00000600097 PDE8BO95263 885 aa21.61■■□□□ 1.05
SMG9-210ENST00000600097 GTF2A2P52657 109 aa21.61■■□□□ 1.05
SMG9-210ENST00000600097 CHAF1AQ13111 956 aaPredicted RBP21.61■■□□□ 1.05
SMG9-210ENST00000600097 ARHGEF6Q15052 776 aa21.61■■□□□ 1.05
SMG9-210ENST00000600097 CDAN1Q8IWY9 1227 aa21.61■■□□□ 1.05
SMG9-210ENST00000600097 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.61■■□□□ 1.051e-9■■■□□ 18
SMG9-210ENST00000600097 TEKT1Q969V4 418 aa21.61■■□□□ 1.05
SMG9-210ENST00000600097 MRIQ9BWK5 157 aa21.61■■□□□ 1.05
SMG9-210ENST00000600097 IQSEC3Q9UPP2 1182 aaPredicted RBP21.61■■□□□ 1.05
SMG9-210ENST00000600097 VGLL4Q14135 290 aa21.6■■□□□ 1.05
SMG9-210ENST00000600097 LRRC24Q50LG9 513 aa21.6■■□□□ 1.05
SMG9-210ENST00000600097 ANKRD44Q8N8A2 993 aa21.6■■□□□ 1.05
SMG9-210ENST00000600097 ARMC5Q96C12 935 aa21.6■■□□□ 1.05
SMG9-210ENST00000600097 TMOD2Q9NZR1 351 aa21.6■■□□□ 1.05
SMG9-210ENST00000600097 PTPRCP08575 1304 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 HTTP42858 3142 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 CCL15-CCL14A0A0B4J2E2 113 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 GRIK5Q16478 980 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 CCL15Q16663 113 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 VGLL2Q8N8G2 317 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 BRI3BPQ8WY22 251 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 ARAP2Q8WZ64 1704 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 GCC1Q96CN9 775 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 HOOK2Q96ED9 719 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 ZFYVE28Q9HCC9 887 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 SUGT1Q9Y2Z0 365 aa21.59■■□□□ 1.05
SMG9-210ENST00000600097 MAST3O60307 1309 aa21.58■■□□□ 1.05
SMG9-210ENST00000600097 KIF16BQ96L93 1317 aa21.58■■□□□ 1.05
SMG9-210ENST00000600097 WDHD1O75717 1129 aaPredicted RBP21.58■■□□□ 1.05
SMG9-210ENST00000600097 TAF1CQ15572 869 aaPredicted RBP21.58■■□□□ 1.05
SMG9-210ENST00000600097 FKBP1CQ5VVH2 108 aa21.58■■□□□ 1.05
SMG9-210ENST00000600097 MRPL50Q8N5N7 158 aaKnown RBP21.58■■□□□ 1.05
SMG9-210ENST00000600097 CNKSR2Q8WXI2 1034 aa21.58■■□□□ 1.05
SMG9-210ENST00000600097 OTUD5Q96G74 571 aa21.58■■□□□ 1.05
SMG9-210ENST00000600097 ZDHHC15Q96MV8 337 aa21.58■■□□□ 1.05
SMG9-210ENST00000600097 ZNF521Q96K83 1311 aa21.57■■□□□ 1.04
SMG9-210ENST00000600097 POTEFA5A3E0 1075 aa21.57■■□□□ 1.04
SMG9-210ENST00000600097 ZNF316A6NFI3 1004 aaPredicted RBP21.57■■□□□ 1.04
SMG9-210ENST00000600097 FAM83AQ86UY5 434 aa21.57■■□□□ 1.04
SMG9-210ENST00000600097 OTOFQ9HC10 1997 aa21.57■■□□□ 1.04
SMG9-210ENST00000600097 SPDYE5A6NIY4 337 aa21.56■■□□□ 1.04
SMG9-210ENST00000600097 IFIT1P09914 478 aaKnown RBP21.56■■□□□ 1.04
SMG9-210ENST00000600097 BCAMP50895 628 aa21.56■■□□□ 1.04
SMG9-210ENST00000600097 PUM3Q15397 648 aaKnown RBP21.56■■□□□ 1.04
SMG9-210ENST00000600097 CETPP11597 493 aa21.55■■□□□ 1.04
SMG9-210ENST00000600097 CACNB3P54284 484 aa21.55■■□□□ 1.04
SMG9-210ENST00000600097 HHIPL2Q6UWX4 724 aa21.55■■□□□ 1.04
SMG9-210ENST00000600097 ERO1BQ86YB8 467 aa21.55■■□□□ 1.04
SMG9-210ENST00000600097 ZCCHC17Q9NP64 241 aaKnown RBP21.55■■□□□ 1.04
SMG9-210ENST00000600097 APOBEC3HQ6NTF7 200 aaKnown RBP21.54■■□□□ 1.04
SMG9-210ENST00000600097 NBPF11Q86T75 865 aa21.54■■□□□ 1.04
SMG9-210ENST00000600097 FAM43AQ8N2R8 423 aa21.54■■□□□ 1.04
SMG9-210ENST00000600097 WRNIP1Q96S55 665 aa21.54■■□□□ 1.04
SMG9-210ENST00000600097 TMEM106CQ9BVX2 250 aa21.54■■□□□ 1.04
SMG9-210ENST00000600097 USP44Q9H0E7 712 aa21.54■■□□□ 1.04
SMG9-210ENST00000600097 FGFR2P21802 821 aa21.53■■□□□ 1.04
SMG9-210ENST00000600097 CAP1Q01518 475 aa21.53■■□□□ 1.04
SMG9-210ENST00000600097 DCAF15Q66K64 600 aa21.53■■□□□ 1.04
SMG9-210ENST00000600097 KLHDC4Q8TBB5 520 aa21.53■■□□□ 1.04
SMG9-210ENST00000600097 SNCAIPQ9Y6H5 919 aa21.53■■□□□ 1.04
SMG9-210ENST00000600097 KIAA0100Q14667 2235 aaKnown RBP21.52■■□□□ 1.04
SMG9-210ENST00000600097 RPAP1Q9BWH6 1393 aaPredicted RBP21.52■■□□□ 1.04
SMG9-210ENST00000600097 SNAPC2Q13487 334 aa21.52■■□□□ 1.04
SMG9-210ENST00000600097 WDR66Q8TBY9 1149 aa21.52■■□□□ 1.04
SMG9-210ENST00000600097 ZNF333Q96JL9 665 aa21.52■■□□□ 1.04
SMG9-210ENST00000600097 E9PSI1 815 aa21.51■■□□□ 1.03
SMG9-210ENST00000600097 EYA2O00167 538 aa21.51■■□□□ 1.03
SMG9-210ENST00000600097 TLR2O60603 784 aa21.51■■□□□ 1.03
SMG9-210ENST00000600097 SLC5A1P13866 664 aa21.51■■□□□ 1.03
SMG9-210ENST00000600097 SLC9C1Q4G0N8 1177 aa21.51■■□□□ 1.03
SMG9-210ENST00000600097 SSH1Q8WYL5 1049 aa21.51■■□□□ 1.03
SMG9-210ENST00000600097 LPIN2Q92539 896 aa21.51■■□□□ 1.03
SMG9-210ENST00000600097 ZKSCAN4Q969J2 545 aaPredicted RBP21.51■■□□□ 1.03
SMG9-210ENST00000600097 IRF6O14896 467 aa21.5■■□□□ 1.03
SMG9-210ENST00000600097 EN2P19622 333 aaPredicted RBP21.5■■□□□ 1.03
SMG9-210ENST00000600097 PPIL2Q13356 520 aa21.5■■□□□ 1.03
SMG9-210ENST00000600097 KIF22Q14807 665 aa21.5■■□□□ 1.03
SMG9-210ENST00000600097 ZNF341Q9BYN7 854 aa21.5■■□□□ 1.03
SMG9-210ENST00000600097 PTCH2Q9Y6C5 1203 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms