RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ABCF2Q9UG63 623 aa20.16■□□□□ 0.82
SHKBP1-219ENST00000599575 PGAP2Q9UHJ9 254 aa20.16■□□□□ 0.82
SHKBP1-219ENST00000599575 AOX1Q06278 1338 aa20.16■□□□□ 0.82
SHKBP1-219ENST00000599575 CYP2E1P05181 493 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-219ENST00000599575 ZAP70P43403 619 aa20.15■□□□□ 0.82
SHKBP1-219ENST00000599575 DLGAP5Q15398 846 aa20.15■□□□□ 0.82
SHKBP1-219ENST00000599575 TICAM2Q86XR7 235 aa20.15■□□□□ 0.82
SHKBP1-219ENST00000599575 FAM163AQ96GL9 167 aaPredicted RBP20.15■□□□□ 0.82
SHKBP1-219ENST00000599575 OSBPL3Q9H4L5 887 aa20.15■□□□□ 0.82
SHKBP1-219ENST00000599575 LRP2BPQ9P2M1 347 aa20.15■□□□□ 0.82
SHKBP1-219ENST00000599575 MYO1BO43795 1136 aa20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 LDHCP07864 332 aa20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 PRDX5P30044 214 aa20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 PI16Q6UXB8 463 aa20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 SAMD7Q7Z3H4 446 aa20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 DZIP1Q86YF9 867 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 RBM46Q8TBY0 533 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 ZBED3Q96IU2 234 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 ZDHHC15Q96MV8 337 aa20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 BCL11AQ9H165 835 aa20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 SNRKQ9NRH2 765 aa20.14■□□□□ 0.81
SHKBP1-219ENST00000599575 PITPNM2Q9BZ72 1349 aa20.13■□□□□ 0.81
SHKBP1-219ENST00000599575 F8W031 263 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-219ENST00000599575 CRKP46108 304 aa20.13■□□□□ 0.81
SHKBP1-219ENST00000599575 PDE1AP54750 535 aa20.13■□□□□ 0.81
SHKBP1-219ENST00000599575 MAP3K12Q12852 859 aa20.13■□□□□ 0.81
SHKBP1-219ENST00000599575 TBC1D10BQ4KMP7 808 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-219ENST00000599575 PAG1Q9NWQ8 432 aa20.13■□□□□ 0.81
SHKBP1-219ENST00000599575 SPDYE2BA6NHP3 402 aa20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 WNT10BO00744 389 aa20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 MAP4K4O95819 1239 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 SPDYE6P0CI01 402 aa20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 LRRFIP1Q32MZ4 808 aaKnown RBP20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 CFAP100Q494V2 611 aa20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 EAPPQ56P03 285 aaPredicted RBP20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 CERS3Q8IU89 383 aa20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 SMC1BQ8NDV3 1235 aa20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 BOLA2Q9H3K6 86 aa20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 RAI14Q9P0K7 980 aa20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 MYH13Q9UKX3 1938 aa20.12■□□□□ 0.81
SHKBP1-219ENST00000599575 SHTN1A0MZ66 631 aa20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 RBM5P52756 815 aaKnown RBP eCLIP20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 HIRAP54198 1017 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 MECOMQ03112 1051 aa20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 FSTL1Q12841 308 aa20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 GRIK5Q16478 980 aa20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 CHADLQ6NUI6 762 aa20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 PI4K2BQ8TCG2 481 aa20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 TRPM4Q8TD43 1214 aa20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 NSUN4Q96CB9 384 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 DNAJC2Q99543 621 aaKnown RBP20.11■□□□□ 0.81
SHKBP1-219ENST00000599575 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.11■□□□□ 0.812e-8■■■■■ 26.9
SHKBP1-219ENST00000599575 GAKO14976 1311 aa20.1■□□□□ 0.81
SHKBP1-219ENST00000599575 RBM26Q5T8P6 1007 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-219ENST00000599575 ZSCAN25Q6NSZ9 544 aa20.1■□□□□ 0.81
SHKBP1-219ENST00000599575 TBC1D9Q6ZT07 1266 aa20.1■□□□□ 0.81
SHKBP1-219ENST00000599575 OTUD7AQ8TE49 926 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-219ENST00000599575 CLEC11AQ9Y240 323 aa20.1■□□□□ 0.81
SHKBP1-219ENST00000599575 GOLIM4O00461 696 aa20.09■□□□□ 0.81
SHKBP1-219ENST00000599575 EGFRP00533 1210 aa20.09■□□□□ 0.81
SHKBP1-219ENST00000599575 PLEKHM2Q8IWE5 1019 aa20.09■□□□□ 0.81
SHKBP1-219ENST00000599575 DCPSQ96C86 337 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-219ENST00000599575 PIH1D3Q9NQM4 214 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-219ENST00000599575 MROH7-TTC4A0A0A0MT08 1334 aa20.08■□□□□ 0.81
SHKBP1-219ENST00000599575 AKAP11Q9UKA4 1901 aa20.08■□□□□ 0.81
SHKBP1-219ENST00000599575 IDH1O75874 414 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-219ENST00000599575 FKBP1CQ5VVH2 108 aa20.08■□□□□ 0.81
SHKBP1-219ENST00000599575 NAA16Q6N069 864 aaPredicted RBP20.08■□□□□ 0.81
SHKBP1-219ENST00000599575 APOBEC3FQ8IUX4 373 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-219ENST00000599575 PRMT6Q96LA8 375 aaPredicted RBP20.08■□□□□ 0.81
SHKBP1-219ENST00000599575 ADAMTSL1Q8N6G6 1762 aa20.08■□□□□ 0.8
SHKBP1-219ENST00000599575 GPR75-ASB3A0A0A6YYF3 556 aa20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 BAG3O95817 575 aa20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 ZFYP08048 801 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 TNFAIP1Q13829 316 aa20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 NBPF9Q3BBW0 867 aa20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 APOBEC3HQ6NTF7 200 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 CDC37L1Q7L3B6 337 aa20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 KBTBD3Q8NAB2 608 aa20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 NOL10Q9BSC4 688 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 ANTXR1Q9H6X2 564 aa20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 DAGLAQ9Y4D2 1042 aa20.07■□□□□ 0.8
SHKBP1-219ENST00000599575 PLCG2P16885 1265 aa20.06■□□□□ 0.8
SHKBP1-219ENST00000599575 DIXDC1Q155Q3 683 aa20.06■□□□□ 0.8
SHKBP1-219ENST00000599575 SPDYE2Q495Y8 402 aa20.06■□□□□ 0.8
SHKBP1-219ENST00000599575 SULF1Q8IWU6 871 aa20.06■□□□□ 0.8
SHKBP1-219ENST00000599575 GGA3Q9NZ52 723 aa20.06■□□□□ 0.8
SHKBP1-219ENST00000599575 TMOD2Q9NZR1 351 aa20.06■□□□□ 0.8
SHKBP1-219ENST00000599575 PPP2R3BQ9Y5P8 575 aa20.06■□□□□ 0.8
SHKBP1-219ENST00000599575 PPP4CP60510 307 aa20.05■□□□□ 0.8
SHKBP1-219ENST00000599575 SLC9C2Q5TAH2 1124 aa20.05■□□□□ 0.8
SHKBP1-219ENST00000599575 ANGEL2Q5VTE6 544 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-219ENST00000599575 CNTROBQ8N137 903 aa20.05■□□□□ 0.8
SHKBP1-219ENST00000599575 EVI5LQ96CN4 794 aa20.05■□□□□ 0.8
SHKBP1-219ENST00000599575 POTEIP0CG38 1075 aa20.04■□□□□ 0.8
SHKBP1-219ENST00000599575 POTEJP0CG39 1038 aa20.04■□□□□ 0.8
SHKBP1-219ENST00000599575 UBE3CQ15386 1083 aa20.04■□□□□ 0.8
SHKBP1-219ENST00000599575 TSHZ3Q63HK5 1081 aa20.04■□□□□ 0.8
SHKBP1-219ENST00000599575 ZNF384Q8TF68 577 aa20.04■□□□□ 0.8
SHKBP1-219ENST00000599575 NDUFB9Q9Y6M9 179 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms