RNA–Protein interactions for RNA: ENST00000599464.1

PRKD2-213, Transcript of protein kinase D2, human

TSL 2

Gene PRKD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD2-213	ENST00000599464	TCP10L2	B9ZVM9	353 aa		11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	FGFR2	P21802	821 aa		11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	IL15	P40933	162 aa	Predicted RBP	11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	DGKZ	Q13574	1117 aa		11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	SPDYE2	Q495Y8	402 aa		11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	INTS3	Q68E01	1043 aa	Known RBP	11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	ATF7IP	Q6VMQ6	1270 aa		11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	DZIP1L	Q8IYY4	767 aa	Known RBP	11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	WDR66	Q8TBY9	1149 aa		11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	CLUAP1	Q96AJ1	413 aa		11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	SLC10A4	Q96EP9	437 aa		11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	ABHD8	Q96I13	439 aa		11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	PA2G4	Q9UQ80	394 aa	Known RBP	11.68	□□□□□ -0.54
PRKD2-213	ENST00000599464	CCDC85C	A6NKD9	419 aa		11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	SRGAP3	O43295	1099 aa		11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	BCAR3	O75815	825 aa		11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	TRIM27	P14373	513 aa		11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	HDLBP	Q00341	1268 aa	Known RBP	11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	ZKSCAN2	Q63HK3	967 aa		11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	ATG9A	Q7Z3C6	839 aa		11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	FTSJ3	Q8IY81	847 aa	Known RBP	11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	FZD1	Q9UP38	647 aa		11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	SUGT1	Q9Y2Z0	365 aa		11.67	□□□□□ -0.54
PRKD2-213	ENST00000599464	GNAI2	P04899	355 aa		11.66	□□□□□ -0.54
PRKD2-213	ENST00000599464	ANKRD13A	Q8IZ07	590 aa		11.66	□□□□□ -0.54
PRKD2-213	ENST00000599464	DENND2A	Q9ULE3	1009 aa		11.66	□□□□□ -0.54
PRKD2-213	ENST00000599464	AKAP2	Q9Y2D5	859 aa		11.66	□□□□□ -0.54
PRKD2-213	ENST00000599464	POLR2A	P24928	1970 aa	Known RBP	11.65	□□□□□ -0.54
PRKD2-213	ENST00000599464	MANSC4	A6NHS7	340 aa	Predicted RBP	11.65	□□□□□ -0.54
PRKD2-213	ENST00000599464	MAP3K11	Q16584	847 aa		11.65	□□□□□ -0.54
PRKD2-213	ENST00000599464	LDLRAD1	Q5T700	205 aa		11.65	□□□□□ -0.54
PRKD2-213	ENST00000599464	GORAB	Q5T7V8	394 aa		11.65	□□□□□ -0.54
PRKD2-213	ENST00000599464	SPRYD7	Q5W111	196 aa		11.65	□□□□□ -0.54
PRKD2-213	ENST00000599464	MCOLN1	Q9GZU1	580 aa		11.65	□□□□□ -0.54
PRKD2-213	ENST00000599464	COPRS	Q9NQ92	184 aa		11.65	□□□□□ -0.54
PRKD2-213	ENST00000599464	ARAP2	Q8WZ64	1704 aa		11.65	□□□□□ -0.54
PRKD2-213	ENST00000599464	AOX1	Q06278	1338 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	SSC5D	A1L4H1	1573 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	UNCX	A6NJT0	531 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	SEMA3E	O15041	775 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	TBC1D8	O95759	1140 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	ALDH1A1	P00352	501 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	LDHB	P07195	334 aa	Known RBP	11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	ZBTB48	P10074	688 aa	Predicted RBP	11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	TM4SF4	P48230	202 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	CACNB3	P54284	484 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	GRIK5	Q16478	980 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	ZGPAT	Q8N5A5	531 aa	Known RBP	11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	HOOK2	Q96ED9	719 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	ZDHHC15	Q96MV8	337 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	TMEM39B	Q9GZU3	492 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	CSAD	Q9Y600	493 aa		11.64	□□□□□ -0.55
PRKD2-213	ENST00000599464	ECM29	Q5VYK3	1845 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	USP2	O75604	605 aa	Predicted RBP	11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	INHBE	P58166	350 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	OS9	Q13438	667 aa	Predicted RBP	11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	MVP	Q14764	893 aa	Known RBP	11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	OTUD7B	Q6GQQ9	843 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	HHIPL2	Q6UWX4	724 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	DZIP1	Q86YF9	867 aa	Known RBP	11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	ITPRIP	Q8IWB1	547 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	WNK4	Q96J92	1243 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	CLMN	Q96JQ2	1002 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	NEUROD6	Q96NK8	337 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	MRI	Q9BWK5	157 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464	TNN	Q9UQP3	1299 aa		11.63	□□□□□ -0.55
PRKD2-213	ENST00000599464		A0A1B0GUL7	405 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	PRDX5	P30044	214 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	PHKA1	P46020	1223 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	TIMM10	P62072	90 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	TFCP2	Q12800	502 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	MTX1	Q13505	466 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	DCAF15	Q66K64	600 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	CCDC102B	Q68D86	513 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	CTU1	Q7Z7A3	348 aa	Known RBP	11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	SLF2	Q8IX21	1173 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	TMEM57	Q8N5G2	664 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	ELP3	Q9H9T3	547 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	ABCF2	Q9UG63	623 aa		11.62	□□□□□ -0.55
PRKD2-213	ENST00000599464	ZBED9	Q6R2W3	1325 aa		11.61	□□□□□ -0.55
PRKD2-213	ENST00000599464	ADORA1	P30542	326 aa		11.61	□□□□□ -0.55
PRKD2-213	ENST00000599464	MAP3K9	P80192	1104 aa		11.61	□□□□□ -0.55
PRKD2-213	ENST00000599464	DIXDC1	Q155Q3	683 aa		11.61	□□□□□ -0.55
PRKD2-213	ENST00000599464	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.61	□□□□□ -0.55
PRKD2-213	ENST00000599464	FAM83A	Q86UY5	434 aa		11.61	□□□□□ -0.55
PRKD2-213	ENST00000599464	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.61	□□□□□ -0.55
PRKD2-213	ENST00000599464	OPTN	Q96CV9	577 aa		11.61	□□□□□ -0.55
PRKD2-213	ENST00000599464	SALL1	Q9NSC2	1324 aa		11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	GPR25	O00155	361 aa		11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	TCP10	Q12799	353 aa		11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	FKBP1C	Q5VVH2	108 aa		11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	IFNL1	Q8IU54	200 aa		11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	XAGE2	Q96GT9	111 aa		11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	TEPSIN	Q96N21	525 aa		11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	WRNIP1	Q96S55	665 aa		11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	USP40	Q9NVE5	1235 aa		11.6	□□□□□ -0.55
PRKD2-213	ENST00000599464	DAGLA	Q9Y4D2	1042 aa		11.6	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms