RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 CRKP46108 304 aa26.65■■□□□ 1.86
PNKP-212ENST00000599454 HDLBPQ00341 1268 aaKnown RBP26.65■■□□□ 1.86
PNKP-212ENST00000599454 INTS3Q68E01 1043 aaKnown RBP26.65■■□□□ 1.86
PNKP-212ENST00000599454 FBXO33Q7Z6M2 555 aa26.65■■□□□ 1.86
PNKP-212ENST00000599454 FAM9BQ8IZU0 186 aa26.65■■□□□ 1.86
PNKP-212ENST00000599454 TEPSINQ96N21 525 aa26.65■■□□□ 1.86
PNKP-212ENST00000599454 PCDH10Q9P2E7 1040 aa26.65■■□□□ 1.86
PNKP-212ENST00000599454 ZEB1P37275 1124 aaPredicted RBP26.64■■□□□ 1.86
PNKP-212ENST00000599454 CRHR2Q13324 411 aa26.64■■□□□ 1.86
PNKP-212ENST00000599454 CAVIN4Q5BKX8 364 aa26.64■■□□□ 1.86
PNKP-212ENST00000599454 OPTNQ96CV9 577 aa26.64■■□□□ 1.86
PNKP-212ENST00000599454 BICC1Q9H694 974 aaKnown RBP26.64■■□□□ 1.86
PNKP-212ENST00000599454 ZNF316A6NFI3 1004 aaPredicted RBP26.63■■□□□ 1.85
PNKP-212ENST00000599454 ELP3Q9H9T3 547 aa26.63■■□□□ 1.85
PNKP-212ENST00000599454 ZNF521Q96K83 1311 aa26.63■■□□□ 1.85
PNKP-212ENST00000599454 METTL24Q5JXM2 366 aa26.62■■□□□ 1.85
PNKP-212ENST00000599454 PTPRCP08575 1304 aa26.62■■□□□ 1.85
PNKP-212ENST00000599454 TCP10L2B9ZVM9 353 aa26.61■■□□□ 1.85
PNKP-212ENST00000599454 PTPN18Q99952 460 aa26.61■■□□□ 1.85
PNKP-212ENST00000599454 FRAT2O75474 233 aaPredicted RBP26.6■■□□□ 1.85
PNKP-212ENST00000599454 PDE8BO95263 885 aa26.6■■□□□ 1.85
PNKP-212ENST00000599454 MAP3K9P80192 1104 aa26.6■■□□□ 1.85
PNKP-212ENST00000599454 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.6■■□□□ 1.85
PNKP-212ENST00000599454 MRPL50Q8N5N7 158 aaKnown RBP26.6■■□□□ 1.85
PNKP-212ENST00000599454 ANKRD44Q8N8A2 993 aa26.6■■□□□ 1.85
PNKP-212ENST00000599454 VGLL2Q8N8G2 317 aa26.6■■□□□ 1.85
PNKP-212ENST00000599454 TEKT1Q969V4 418 aa26.6■■□□□ 1.85
PNKP-212ENST00000599454 MRIQ9BWK5 157 aa26.6■■□□□ 1.85
PNKP-212ENST00000599454 PTPN22Q9Y2R2 807 aa26.6■■□□□ 1.85
PNKP-212ENST00000599454 KIF16BQ96L93 1317 aa26.6■■□□□ 1.85
PNKP-212ENST00000599454 SP3Q02447 781 aa26.59■■□□□ 1.85
PNKP-212ENST00000599454 CHAF1AQ13111 956 aaPredicted RBP26.59■■□□□ 1.85
PNKP-212ENST00000599454 LRRC24Q50LG9 513 aa26.59■■□□□ 1.85
PNKP-212ENST00000599454 CD99L2Q8TCZ2 262 aa26.59■■□□□ 1.85
PNKP-212ENST00000599454 MS4A4AQ96JQ5 239 aa26.59■■□□□ 1.85
PNKP-212ENST00000599454 TMEM39BQ9GZU3 492 aa26.59■■□□□ 1.85
PNKP-212ENST00000599454 SUGT1Q9Y2Z0 365 aa26.59■■□□□ 1.85
PNKP-212ENST00000599454 CSADQ9Y600 493 aa26.59■■□□□ 1.85
PNKP-212ENST00000599454 GTF2A2P52657 109 aa26.58■■□□□ 1.85
PNKP-212ENST00000599454 CDAN1Q8IWY9 1227 aa26.58■■□□□ 1.85
PNKP-212ENST00000599454 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.58■■□□□ 1.853e-6■■■■■ 38.3
PNKP-212ENST00000599454 EFCC1Q9HA90 598 aa26.58■■□□□ 1.85
PNKP-212ENST00000599454 IQSEC3Q9UPP2 1182 aaPredicted RBP26.58■■□□□ 1.85
PNKP-212ENST00000599454 MAST3O60307 1309 aa26.58■■□□□ 1.85
PNKP-212ENST00000599454 VGLL4Q14135 290 aa26.57■■□□□ 1.84
PNKP-212ENST00000599454 GRIK5Q16478 980 aa26.57■■□□□ 1.84
PNKP-212ENST00000599454 HOOK2Q96ED9 719 aa26.57■■□□□ 1.84
PNKP-212ENST00000599454 TMOD2Q9NZR1 351 aa26.57■■□□□ 1.84
PNKP-212ENST00000599454 ARHGEF6Q15052 776 aa26.56■■□□□ 1.84
PNKP-212ENST00000599454 FKBP1CQ5VVH2 108 aa26.56■■□□□ 1.84
PNKP-212ENST00000599454 FAM83AQ86UY5 434 aa26.56■■□□□ 1.84
PNKP-212ENST00000599454 ZDHHC15Q96MV8 337 aa26.56■■□□□ 1.84
PNKP-212ENST00000599454 AK9Q5TCS8 1911 aa26.56■■□□□ 1.84
PNKP-212ENST00000599454 CCL15-CCL14A0A0B4J2E2 113 aa26.55■■□□□ 1.84
PNKP-212ENST00000599454 CCL15Q16663 113 aa26.55■■□□□ 1.84
PNKP-212ENST00000599454 BRI3BPQ8WY22 251 aa26.55■■□□□ 1.84
PNKP-212ENST00000599454 ARMC5Q96C12 935 aa26.55■■□□□ 1.84
PNKP-212ENST00000599454 ZFYVE28Q9HCC9 887 aa26.55■■□□□ 1.84
PNKP-212ENST00000599454 IFIT1P09914 478 aaKnown RBP26.54■■□□□ 1.84
PNKP-212ENST00000599454 PUM3Q15397 648 aaKnown RBP26.54■■□□□ 1.84
PNKP-212ENST00000599454 TAF1CQ15572 869 aaPredicted RBP26.54■■□□□ 1.84
PNKP-212ENST00000599454 SPDYE5A6NIY4 337 aa26.53■■□□□ 1.84
PNKP-212ENST00000599454 E9PSI1 815 aa26.53■■□□□ 1.84
PNKP-212ENST00000599454 WDHD1O75717 1129 aaPredicted RBP26.53■■□□□ 1.84
PNKP-212ENST00000599454 BCAMP50895 628 aa26.53■■□□□ 1.84
PNKP-212ENST00000599454 CNKSR2Q8WXI2 1034 aa26.53■■□□□ 1.84
PNKP-212ENST00000599454 USP44Q9H0E7 712 aa26.53■■□□□ 1.84
PNKP-212ENST00000599454 RPAP1Q9BWH6 1393 aaPredicted RBP26.53■■□□□ 1.84
PNKP-212ENST00000599454 FGFR2P21802 821 aa26.52■■□□□ 1.84
PNKP-212ENST00000599454 HHIPL2Q6UWX4 724 aa26.52■■□□□ 1.84
PNKP-212ENST00000599454 OTUD5Q96G74 571 aa26.52■■□□□ 1.84
PNKP-212ENST00000599454 ZCCHC17Q9NP64 241 aaKnown RBP26.52■■□□□ 1.84
PNKP-212ENST00000599454 HTTP42858 3142 aa26.52■■□□□ 1.84
PNKP-212ENST00000599454 ERO1BQ86YB8 467 aa26.51■■□□□ 1.83
PNKP-212ENST00000599454 KLHDC4Q8TBB5 520 aa26.51■■□□□ 1.83
PNKP-212ENST00000599454 SSH1Q8WYL5 1049 aa26.51■■□□□ 1.83
PNKP-212ENST00000599454 GCC1Q96CN9 775 aa26.51■■□□□ 1.83
PNKP-212ENST00000599454 POTEFA5A3E0 1075 aa26.5■■□□□ 1.83
PNKP-212ENST00000599454 CACNB3P54284 484 aa26.5■■□□□ 1.83
PNKP-212ENST00000599454 DCAF15Q66K64 600 aa26.5■■□□□ 1.83
PNKP-212ENST00000599454 APOBEC3HQ6NTF7 200 aaKnown RBP26.5■■□□□ 1.83
PNKP-212ENST00000599454 EYA2O00167 538 aa26.49■■□□□ 1.83
PNKP-212ENST00000599454 CETPP11597 493 aa26.49■■□□□ 1.83
PNKP-212ENST00000599454 SLC5A1P13866 664 aa26.49■■□□□ 1.83
PNKP-212ENST00000599454 WDR66Q8TBY9 1149 aa26.49■■□□□ 1.83
PNKP-212ENST00000599454 WRNIP1Q96S55 665 aa26.49■■□□□ 1.83
PNKP-212ENST00000599454 SNCAIPQ9Y6H5 919 aa26.49■■□□□ 1.83
PNKP-212ENST00000599454 FAM43AQ8N2R8 423 aa26.48■■□□□ 1.83
PNKP-212ENST00000599454 LPIN2Q92539 896 aa26.48■■□□□ 1.83
PNKP-212ENST00000599454 RFX5P48382 616 aaPredicted RBP26.47■■□□□ 1.83
PNKP-212ENST00000599454 CAP1Q01518 475 aa26.47■■□□□ 1.83
PNKP-212ENST00000599454 SNAPC2Q13487 334 aa26.47■■□□□ 1.83
PNKP-212ENST00000599454 ALDH1L2Q3SY69 923 aa26.47■■□□□ 1.83
PNKP-212ENST00000599454 PPIL2Q13356 520 aa26.46■■□□□ 1.83
PNKP-212ENST00000599454 NBPF11Q86T75 865 aa26.46■■□□□ 1.83
PNKP-212ENST00000599454 FBXO3Q9UK99 471 aa26.46■■□□□ 1.83
PNKP-212ENST00000599454 TLR2O60603 784 aa26.45■■□□□ 1.82
PNKP-212ENST00000599454 TMEM106CQ9BVX2 250 aa26.45■■□□□ 1.82
PNKP-212ENST00000599454 ZNF341Q9BYN7 854 aa26.45■■□□□ 1.82
PNKP-212ENST00000599454 SLFN5Q08AF3 891 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms