RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 NOGQ13253 232 aa15.11■□□□□ 0.01
LIG1-217ENST00000599165 PANK1Q8TE04 598 aa15.11■□□□□ 0.01
LIG1-217ENST00000599165 TDRD3Q9H7E2 651 aaKnown RBP15.11■□□□□ 0.01
LIG1-217ENST00000599165 PRDM10Q9NQV6 1147 aa15.11■□□□□ 0.01
LIG1-217ENST00000599165 ZNF70Q9UC06 446 aaPredicted RBP15.11■□□□□ 0.01
LIG1-217ENST00000599165 AKAP11Q9UKA4 1901 aa15.11■□□□□ 0.01
LIG1-217ENST00000599165 CASP8AP2Q9UKL3 1982 aa15.11■□□□□ 0.01
LIG1-217ENST00000599165 KIF23Q02241 960 aaPredicted RBP15.1■□□□□ 0.01
LIG1-217ENST00000599165 SSH3Q8TE77 659 aa15.1■□□□□ 0.01
LIG1-217ENST00000599165 TBC1D22AQ8WUA7 517 aa15.1■□□□□ 0.01
LIG1-217ENST00000599165 AIDAQ96BJ3 306 aa15.1■□□□□ 0.01
LIG1-217ENST00000599165 TEPSINQ96N21 525 aa15.1■□□□□ 0.01
LIG1-217ENST00000599165 TSKSQ9UJT2 592 aa15.1■□□□□ 0.01
LIG1-217ENST00000599165 A0A1B0GUL7 405 aa15.09■□□□□ 0.01
LIG1-217ENST00000599165 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.01
LIG1-217ENST00000599165 HDLBPQ00341 1268 aaKnown RBP15.09■□□□□ 0.01
LIG1-217ENST00000599165 RASA3Q14644 834 aa15.09■□□□□ 0.01
LIG1-217ENST00000599165 LDLRAD1Q5T700 205 aa15.09■□□□□ 0.01
LIG1-217ENST00000599165 NBPF12Q5TAG4 269 aaPredicted RBP15.09■□□□□ 0.01
LIG1-217ENST00000599165 CCDC102BQ68D86 513 aa15.09■□□□□ 0.01
LIG1-217ENST00000599165 APOBEC3HQ6NTF7 200 aaKnown RBP15.09■□□□□ 0.01
LIG1-217ENST00000599165 ITPRIPQ8IWB1 547 aa15.09■□□□□ 0.01
LIG1-217ENST00000599165 CCDC102AQ96A19 550 aa15.09■□□□□ 0.01
LIG1-217ENST00000599165 VEZTQ9HBM0 779 aa15.09■□□□□ 0.01
LIG1-217ENST00000599165 PPP2R3BQ9Y5P8 575 aa15.09■□□□□ 0.01
LIG1-217ENST00000599165 MYH2Q9UKX2 1941 aa15.09■□□□□ 0.01
LIG1-217ENST00000599165 FRAT2O75474 233 aaPredicted RBP15.08■□□□□ 0
LIG1-217ENST00000599165 PRDX5P30044 214 aa15.08■□□□□ 0
LIG1-217ENST00000599165 ATP8B2P98198 1209 aa15.08■□□□□ 0
LIG1-217ENST00000599165 RASGRF1Q13972 1273 aa15.08■□□□□ 0
LIG1-217ENST00000599165 PRKG1Q13976 671 aa15.08■□□□□ 0
LIG1-217ENST00000599165 MAP3K11Q16584 847 aa15.08■□□□□ 0
LIG1-217ENST00000599165 FTSJ3Q8IY81 847 aaKnown RBP15.08■□□□□ 0
LIG1-217ENST00000599165 XAGE2Q96GT9 111 aa15.08■□□□□ 0
LIG1-217ENST00000599165 ZDHHC15Q96MV8 337 aa15.08■□□□□ 0
LIG1-217ENST00000599165 CSRNP1Q96S65 589 aa15.08■□□□□ 0
LIG1-217ENST00000599165 MRIQ9BWK5 157 aa15.08■□□□□ 0
LIG1-217ENST00000599165 SUGT1Q9Y2Z0 365 aa15.08■□□□□ 0
LIG1-217ENST00000599165 SALL1Q9NSC2 1324 aa15.08■□□□□ 0
LIG1-217ENST00000599165 MYO1BO43795 1136 aa15.07■□□□□ 0
LIG1-217ENST00000599165 CACNB3P54284 484 aa15.07■□□□□ 0
LIG1-217ENST00000599165 WDR66Q8TBY9 1149 aa15.07■□□□□ 0
LIG1-217ENST00000599165 MYO5AQ9Y4I1 1855 aaKnown RBP15.06■□□□□ 0
LIG1-217ENST00000599165 SEMA3EO15041 775 aa15.06■□□□□ 0
LIG1-217ENST00000599165 DIXDC1Q155Q3 683 aa15.06■□□□□ 0
LIG1-217ENST00000599165 HHIPL2Q6UWX4 724 aa15.06■□□□□ 0
LIG1-217ENST00000599165 TNS4Q8IZW8 715 aa15.06■□□□□ 0
LIG1-217ENST00000599165 TEKT1Q969V4 418 aa15.06■□□□□ 0
LIG1-217ENST00000599165 CLMNQ96JQ2 1002 aa15.06■□□□□ 0
LIG1-217ENST00000599165 ANGEL1Q9UNK9 670 aaKnown RBP15.06■□□□□ 0
LIG1-217ENST00000599165 TCP10L2B9ZVM9 353 aa15.05■□□□□ -0
LIG1-217ENST00000599165 USP2O75604 605 aaPredicted RBP15.05■□□□□ -0
LIG1-217ENST00000599165 NF2P35240 595 aa15.05■□□□□ -0
LIG1-217ENST00000599165 TTLL12Q14166 644 aaPredicted RBP15.05■□□□□ -0
LIG1-217ENST00000599165 CEP85Q6P2H3 762 aa15.05■□□□□ -0
LIG1-217ENST00000599165 ZNF384Q8TF68 577 aa15.05■□□□□ -0
LIG1-217ENST00000599165 TMEM39BQ9GZU3 492 aa15.05■□□□□ -0
LIG1-217ENST00000599165 NOP58Q9Y2X3 529 aaKnown RBP15.05■□□□□ -0
LIG1-217ENST00000599165 DAGLAQ9Y4D2 1042 aa15.05■□□□□ -0
LIG1-217ENST00000599165 PDS5AQ29RF7 1337 aaKnown RBP15.05■□□□□ -0
LIG1-217ENST00000599165 MAST3O60307 1309 aa15.04■□□□□ -0
LIG1-217ENST00000599165 PI16Q6UXB8 463 aa15.04■□□□□ -0
LIG1-217ENST00000599165 ARMC9Q7Z3E5 817 aa15.04■□□□□ -0
LIG1-217ENST00000599165 RNF186Q9NXI6 227 aa15.04■□□□□ -0
LIG1-217ENST00000599165 RCAN3Q9UKA8 241 aa15.04■□□□□ -0
LIG1-217ENST00000599165 DENND2AQ9ULE3 1009 aa15.04■□□□□ -0
LIG1-217ENST00000599165 AKAP2Q9Y2D5 859 aa15.04■□□□□ -0
LIG1-217ENST00000599165 RFX7Q2KHR2 1363 aa15.03■□□□□ -0
LIG1-217ENST00000599165 CA12O43570 354 aa15.03■□□□□ -0
LIG1-217ENST00000599165 GNL3LQ9NVN8 582 aaKnown RBP15.03■□□□□ -0
LIG1-217ENST00000599165 HMG20BQ9P0W2 317 aa15.03■□□□□ -0
LIG1-217ENST00000599165 GAKO14976 1311 aa15.02■□□□□ -0
LIG1-217ENST00000599165 ARID4AP29374 1257 aaPredicted RBP15.02■□□□□ -0
LIG1-217ENST00000599165 GJA5P36382 358 aa15.02■□□□□ -0
LIG1-217ENST00000599165 NFIAQ12857 509 aa15.02■□□□□ -0
LIG1-217ENST00000599165 MKRN3Q13064 507 aaKnown RBP15.02■□□□□ -0
LIG1-217ENST00000599165 G3BP1Q13283 466 aaKnown RBP eCLIP15.02■□□□□ -0
LIG1-217ENST00000599165 TNFAIP1Q13829 316 aa15.02■□□□□ -0
LIG1-217ENST00000599165 MVPQ14764 893 aaKnown RBP15.02■□□□□ -0
LIG1-217ENST00000599165 SUPT20HL1Q3ZLR7 823 aa15.02■□□□□ -0
LIG1-217ENST00000599165 TNNI3KQ59H18 835 aa15.02■□□□□ -0
LIG1-217ENST00000599165 C20orf194Q5TEA3 1177 aa15.02■□□□□ -0
LIG1-217ENST00000599165 FKBP1CQ5VVH2 108 aa15.02■□□□□ -0
LIG1-217ENST00000599165 SPRYD7Q5W111 196 aa15.02■□□□□ -0
LIG1-217ENST00000599165 CDC42EP5Q6NZY7 148 aa15.02■□□□□ -0
LIG1-217ENST00000599165 SIRT2Q8IXJ6 389 aa15.02■□□□□ -0
LIG1-217ENST00000599165 NEUROD6Q96NK8 337 aa15.02■□□□□ -0
LIG1-217ENST00000599165 BEGAINQ9BUH8 593 aa15.02■□□□□ -0
LIG1-217ENST00000599165 GPR108Q9NPR9 543 aa15.02■□□□□ -0
LIG1-217ENST00000599165 FPGT-TNNI3KV9GXZ4 949 aa15.02■□□□□ -0
LIG1-217ENST00000599165 RPAP1Q9BWH6 1393 aaPredicted RBP15.01□□□□□ -0.01
LIG1-217ENST00000599165 SURF6O75683 361 aaKnown RBP15.01□□□□□ -0.01
LIG1-217ENST00000599165 LDHBP07195 334 aaKnown RBP15.01□□□□□ -0.01
LIG1-217ENST00000599165 MCAMP43121 646 aa15.01□□□□□ -0.01
LIG1-217ENST00000599165 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.01□□□□□ -0.01
LIG1-217ENST00000599165 DBNDD2Q9BQY9 259 aa15.01□□□□□ -0.01
LIG1-217ENST00000599165 ZBTB40Q9NUA8 1239 aa15.01□□□□□ -0.01
LIG1-217ENST00000599165 SAGE1Q9NXZ1 904 aa15.01□□□□□ -0.01
LIG1-217ENST00000599165 TLR7Q9NYK1 1049 aaKnown RBP15.01□□□□□ -0.01
LIG1-217ENST00000599165 COG6Q9Y2V7 657 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms