RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 DENND2AQ9ULE3 1009 aa12□□□□□ -0.49
VRK3-215ENST00000599138 COG6Q9Y2V7 657 aa12□□□□□ -0.49
VRK3-215ENST00000599138 PDS5AQ29RF7 1337 aaKnown RBP12□□□□□ -0.49
VRK3-215ENST00000599138 SALL1Q9NSC2 1324 aa12□□□□□ -0.49
VRK3-215ENST00000599138 MYO1BO43795 1136 aa11.99□□□□□ -0.49
VRK3-215ENST00000599138 SURF6O75683 361 aaKnown RBP11.99□□□□□ -0.49
VRK3-215ENST00000599138 HSPA1AP0DMV8 641 aaKnown RBP11.99□□□□□ -0.49
VRK3-215ENST00000599138 HSPA1BP0DMV9 641 aaKnown RBP11.99□□□□□ -0.49
VRK3-215ENST00000599138 MAP2K2P36507 400 aa11.99□□□□□ -0.49
VRK3-215ENST00000599138 RASGRF1Q13972 1273 aa11.99□□□□□ -0.49
VRK3-215ENST00000599138 C20orf194Q5TEA3 1177 aa11.99□□□□□ -0.49
VRK3-215ENST00000599138 HHIPL2Q6UWX4 724 aa11.99□□□□□ -0.49
VRK3-215ENST00000599138 ZDHHC15Q96MV8 337 aa11.99□□□□□ -0.49
VRK3-215ENST00000599138 ZNF70Q9UC06 446 aaPredicted RBP11.99□□□□□ -0.49
VRK3-215ENST00000599138 PPP2R3BQ9Y5P8 575 aa11.99□□□□□ -0.49
VRK3-215ENST00000599138 MAST3O60307 1309 aa11.99□□□□□ -0.49
VRK3-215ENST00000599138 CLRN2A0PK11 232 aa11.98□□□□□ -0.49
VRK3-215ENST00000599138 FAM155AB1AL88 458 aaPredicted RBP11.98□□□□□ -0.49
VRK3-215ENST00000599138 RBM5P52756 815 aaKnown RBP eCLIP11.98□□□□□ -0.49
VRK3-215ENST00000599138 APOBEC3HQ6NTF7 200 aaKnown RBP11.98□□□□□ -0.49
VRK3-215ENST00000599138 RGMBQ6NW40 437 aa11.98□□□□□ -0.49
VRK3-215ENST00000599138 PAXIP1Q6ZW49 1069 aaPredicted RBP11.98□□□□□ -0.49
VRK3-215ENST00000599138 TEKT1Q969V4 418 aa11.98□□□□□ -0.49
VRK3-215ENST00000599138 AOC2O75106 756 aa11.97□□□□□ -0.49
VRK3-215ENST00000599138 ARID4AP29374 1257 aaPredicted RBP11.97□□□□□ -0.49
VRK3-215ENST00000599138 PRDX5P30044 214 aa11.97□□□□□ -0.49
VRK3-215ENST00000599138 MAP2K1Q02750 393 aaPredicted RBP11.97□□□□□ -0.49
VRK3-215ENST00000599138 TNNI3KQ59H18 835 aa11.97□□□□□ -0.49
VRK3-215ENST00000599138 MOB2Q70IA6 237 aa11.97□□□□□ -0.49
VRK3-215ENST00000599138 SIRT2Q8IXJ6 389 aa11.97□□□□□ -0.49
VRK3-215ENST00000599138 RPAP2Q8IXW5 612 aaPredicted RBP11.97□□□□□ -0.49
VRK3-215ENST00000599138 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.97□□□□□ -0.49
VRK3-215ENST00000599138 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
VRK3-215ENST00000599138 CHMP4BQ9H444 224 aaKnown RBP11.97□□□□□ -0.49
VRK3-215ENST00000599138 TDRD3Q9H7E2 651 aaKnown RBP11.97□□□□□ -0.49
VRK3-215ENST00000599138 FPGT-TNNI3KV9GXZ4 949 aa11.97□□□□□ -0.49
VRK3-215ENST00000599138 SSC5DA1L4H1 1573 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 AKAP11Q9UKA4 1901 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 SLC10A3P09131 477 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 NF2P35240 595 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 NOGQ13253 232 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 TNFAIP1Q13829 316 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 RASA3Q14644 834 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 MAP3K11Q16584 847 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 FKBP1CQ5VVH2 108 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 ZGPATQ8N5A5 531 aaKnown RBP11.96□□□□□ -0.49
VRK3-215ENST00000599138 CCDC102AQ96A19 550 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 TEPSINQ96N21 525 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 ZIC5Q96T25 663 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 VEZTQ9HBM0 779 aa11.96□□□□□ -0.49
VRK3-215ENST00000599138 MYH2Q9UKX2 1941 aa11.96□□□□□ -0.5
VRK3-215ENST00000599138 UBE2Q2LH0YL09 131 aa11.95□□□□□ -0.5
VRK3-215ENST00000599138 FOXN1O15353 648 aa11.95□□□□□ -0.5
VRK3-215ENST00000599138 LDHBP07195 334 aaKnown RBP11.95□□□□□ -0.5
VRK3-215ENST00000599138 ZNF157P51786 506 aaPredicted RBP11.95□□□□□ -0.5
VRK3-215ENST00000599138 GRM1Q13255 1194 aa11.95□□□□□ -0.5
VRK3-215ENST00000599138 OS9Q13438 667 aaPredicted RBP11.95□□□□□ -0.5
VRK3-215ENST00000599138 DIXDC1Q155Q3 683 aa11.95□□□□□ -0.5
VRK3-215ENST00000599138 SUPT20HL1Q3ZLR7 823 aa11.95□□□□□ -0.5
VRK3-215ENST00000599138 LDLRAD1Q5T700 205 aa11.95□□□□□ -0.5
VRK3-215ENST00000599138 DBNDD2Q9BQY9 259 aa11.95□□□□□ -0.5
VRK3-215ENST00000599138 HMG20BQ9P0W2 317 aa11.95□□□□□ -0.5
VRK3-215ENST00000599138 DAGLAQ9Y4D2 1042 aa11.95□□□□□ -0.5
VRK3-215ENST00000599138 GAKO14976 1311 aa11.94□□□□□ -0.5
VRK3-215ENST00000599138 UQCRFS1P1P0C7P4 283 aa11.94□□□□□ -0.5
VRK3-215ENST00000599138 MCAMP43121 646 aa11.94□□□□□ -0.5
VRK3-215ENST00000599138 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
VRK3-215ENST00000599138 NBPF12Q5TAG4 269 aaPredicted RBP11.94□□□□□ -0.5
VRK3-215ENST00000599138 ARMC9Q7Z3E5 817 aa11.94□□□□□ -0.5
VRK3-215ENST00000599138 RASAL3Q86YV0 1011 aa11.94□□□□□ -0.5
VRK3-215ENST00000599138 ERC1Q8IUD2 1116 aa11.94□□□□□ -0.5
VRK3-215ENST00000599138 SPATA5Q8NB90 893 aa11.94□□□□□ -0.5
VRK3-215ENST00000599138 EAF2Q96CJ1 260 aaPredicted RBP11.94□□□□□ -0.5
VRK3-215ENST00000599138 FAM163AQ96GL9 167 aaPredicted RBP11.94□□□□□ -0.5
VRK3-215ENST00000599138 ZNF512BQ96KM6 892 aaPredicted RBP11.94□□□□□ -0.5
VRK3-215ENST00000599138 DBNLQ9UJU6 430 aaKnown RBP11.94□□□□□ -0.5
VRK3-215ENST00000599138 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
VRK3-215ENST00000599138 UNCXA6NJT0 531 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 TCP10L2B9ZVM9 353 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 HMMRO75330 724 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 TTLL12Q14166 644 aaPredicted RBP11.93□□□□□ -0.5
VRK3-215ENST00000599138 HSP90AB4PQ58FF6 505 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 SPTY2D1Q68D10 685 aaPredicted RBP11.93□□□□□ -0.5
VRK3-215ENST00000599138 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 FAM83AQ86UY5 434 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 CDAN1Q8IWY9 1227 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 ZNF384Q8TF68 577 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 AIDAQ96BJ3 306 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 TMEM39BQ9GZU3 492 aa11.93□□□□□ -0.5
VRK3-215ENST00000599138 PPP1R12BO60237 982 aaPredicted RBP11.92□□□□□ -0.5
VRK3-215ENST00000599138 USP2O75604 605 aaPredicted RBP11.92□□□□□ -0.5
VRK3-215ENST00000599138 TNNI2P48788 182 aa11.92□□□□□ -0.5
VRK3-215ENST00000599138 CTCFP49711 727 aaPredicted RBP11.92□□□□□ -0.5
VRK3-215ENST00000599138 CACNB3P54284 484 aa11.92□□□□□ -0.5
VRK3-215ENST00000599138 KIF23Q02241 960 aaPredicted RBP11.92□□□□□ -0.5
VRK3-215ENST00000599138 CCDC158Q5M9N0 1113 aa11.92□□□□□ -0.5
VRK3-215ENST00000599138 CDC42EP5Q6NZY7 148 aa11.92□□□□□ -0.5
VRK3-215ENST00000599138 RHPN1Q8TCX5 695 aa11.92□□□□□ -0.5
VRK3-215ENST00000599138 YTHDC1Q96MU7 727 aaKnown RBP11.92□□□□□ -0.5
VRK3-215ENST00000599138 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms