RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	MYO1B	O43795	1136 aa		13.92	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	PPP1R12B	O60237	982 aa	Predicted RBP	13.92	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	CRK	P46108	304 aa		13.92	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	RFX5	P48382	616 aa	Predicted RBP	13.92	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.92	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	CDCA7L	Q96GN5	454 aa		13.92	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	MS4A4A	Q96JQ5	239 aa		13.92	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	ELP3	Q9H9T3	547 aa		13.92	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	MROH5	Q6ZUA9	1318 aa		13.91	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	UNCX	A6NJT0	531 aa		13.91	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	FGFR2	P21802	821 aa		13.91	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	INHBE	P58166	350 aa		13.91	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	CHAF1A	Q13111	956 aa	Predicted RBP	13.91	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	CRHR2	Q13324	411 aa		13.91	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	OTOP1	Q7RTM1	612 aa		13.91	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	PDE8B	O95263	885 aa		13.9	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	ALDH1A1	P00352	501 aa		13.9	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	IREB2	P48200	963 aa	Known RBP	13.9	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	SLFN5	Q08AF3	891 aa		13.9	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.9	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	ANKRD13A	Q8IZ07	590 aa		13.9	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	BRI3BP	Q8WY22	251 aa		13.9	□□□□□ -0.18
GRAMD1A-209	ENST00000598580	VGLL4	Q14135	290 aa		13.89	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	METTL24	Q5JXM2	366 aa		13.89	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	ATG9A	Q7Z3C6	839 aa		13.89	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	CD99L2	Q8TCZ2	262 aa		13.89	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	OPTN	Q96CV9	577 aa		13.89	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	TRIM17	Q9Y577	477 aa		13.89	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	POTEF	A5A3E0	1075 aa		13.88	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	ZEB1	P37275	1124 aa	Predicted RBP	13.88	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	MAP3K9	P80192	1104 aa		13.88	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	HDLBP	Q00341	1268 aa	Known RBP	13.87	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	TRMT2A	Q8IZ69	625 aa	Known RBP	13.87	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	FAM43A	Q8N2R8	423 aa		13.87	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	ZDHHC15	Q96MV8	337 aa		13.87	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	MRI	Q9BWK5	157 aa		13.87	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	ECM29	Q5VYK3	1845 aa		13.87	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	KIAA0100	Q14667	2235 aa	Known RBP	13.87	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	PTPRC	P08575	1304 aa		13.87	□□□□□ -0.19
GRAMD1A-209	ENST00000598580		E9PSI1	815 aa		13.86	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	EYA2	O00167	538 aa		13.86	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.86	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	PTPN22	Q9Y2R2	807 aa		13.86	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	SNCAIP	Q9Y6H5	919 aa		13.86	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	MKI67	P46013	3256 aa	Known RBP	13.85	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	TNFAIP1	Q13829	316 aa		13.85	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	CAVIN4	Q5BKX8	364 aa		13.85	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	VPS37D	Q86XT2	251 aa		13.85	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	TEKT1	Q969V4	418 aa		13.85	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	OTUD5	Q96G74	571 aa		13.85	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	OTOF	Q9HC10	1997 aa		13.85	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	CENPF	P49454	3210 aa		13.85	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	CCL15-CCL14	A0A0B4J2E2	113 aa		13.84	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	SP3	Q02447	781 aa		13.84	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	PUM3	Q15397	648 aa	Known RBP	13.84	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	CCL15	Q16663	113 aa		13.84	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	PRPF38B	Q5VTL8	546 aa	Known RBP	13.84	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	TBC1D22A	Q8WUA7	517 aa		13.84	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	LAMB1	P07942	1786 aa		13.83	□□□□□ -0.19
GRAMD1A-209	ENST00000598580	SPDYE5	A6NIY4	337 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	IRF6	O14896	467 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	FRAT2	O75474	233 aa	Predicted RBP	13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	INPP5B	P32019	993 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	NFIA	Q12857	509 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	DIXDC1	Q155Q3	683 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	HHIPL2	Q6UWX4	724 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	MIGA2	Q7L4E1	593 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	ZFPM1	Q8IX07	1006 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	ARMC5	Q96C12	935 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	ERO1A	Q96HE7	468 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	ARHGAP39	Q9C0H5	1083 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	KIF16B	Q96L93	1317 aa		13.83	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	BTBD19	C9JJ37	291 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	IFIT1	P09914	478 aa	Known RBP	13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	EN2	P19622	333 aa	Predicted RBP	13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	TNNI2	P48788	182 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	ALDH1L2	Q3SY69	923 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	FKBP1C	Q5VVH2	108 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	OTUD7B	Q6GQQ9	843 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	CDC42EP5	Q6NZY7	148 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	FAM83A	Q86UY5	434 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	LPIN2	Q92539	896 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	SIL1	Q9H173	461 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	EFCC1	Q9HA90	598 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	NOB1	Q9ULX3	412 aa	Known RBP	13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	PA2G4	Q9UQ80	394 aa	Known RBP	13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	DAGLA	Q9Y4D2	1042 aa		13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.82	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	SLURP2	P0DP57	97 aa		13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	CTGF	P29279	349 aa		13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	PRDX5	P30044	214 aa		13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	ADORA1	P30542	326 aa		13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	GTF2A2	P52657	109 aa		13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	MOGS	Q13724	837 aa		13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	TAF1C	Q15572	869 aa	Predicted RBP	13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	WRNIP1	Q96S55	665 aa		13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	SMC4	Q9NTJ3	1288 aa		13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	FAM198A	Q9UFP1	575 aa		13.81	□□□□□ -0.2
GRAMD1A-209	ENST00000598580	SUGT1	Q9Y2Z0	365 aa		13.81	□□□□□ -0.2

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