RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 PTPRCP08575 1304 aa15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 PHIPQ8WWQ0 1821 aa15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 MANSC4A6NHS7 340 aaPredicted RBP15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 TCP10L2B9ZVM9 353 aa15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 CRKP46108 304 aa15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 FBXO33Q7Z6M2 555 aa15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 IFNL1Q8IU54 200 aa15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 DZIP1LQ8IYY4 767 aaKnown RBP15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 CDCA7LQ96GN5 454 aa15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 CFHR5Q9BXR6 569 aa15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 BRCA2P51587 3418 aa15.23■□□□□ 0.03
SOX2-OT-228ENST00000597828 FKTNO75072 461 aa15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 ZBTB48P10074 688 aaPredicted RBP15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 CACNB3P54284 484 aa15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 SUPT20HL1Q3ZLR7 823 aa15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 TEPSINQ96N21 525 aa15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 TMEM39BQ9GZU3 492 aa15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 USP44Q9H0E7 712 aa15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 ELP3Q9H9T3 547 aa15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 SERPINA10Q9UK55 444 aa15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 KIAA0100Q14667 2235 aaKnown RBP15.22■□□□□ 0.03
SOX2-OT-228ENST00000597828 DOCK1Q14185 1865 aa15.21■□□□□ 0.03
SOX2-OT-228ENST00000597828 E9PSI1 815 aa15.21■□□□□ 0.03
SOX2-OT-228ENST00000597828 PDE8BO95263 885 aa15.21■□□□□ 0.03
SOX2-OT-228ENST00000597828 IREB2P48200 963 aaKnown RBP15.21■□□□□ 0.03
SOX2-OT-228ENST00000597828 SLFN5Q08AF3 891 aa15.21■□□□□ 0.03
SOX2-OT-228ENST00000597828 NOM1Q5C9Z4 860 aaKnown RBP15.21■□□□□ 0.03
SOX2-OT-228ENST00000597828 VPS37DQ86XT2 251 aa15.21■□□□□ 0.03
SOX2-OT-228ENST00000597828 RFX5P48382 616 aaPredicted RBP15.2■□□□□ 0.02
SOX2-OT-228ENST00000597828 BCAMP50895 628 aa15.2■□□□□ 0.02
SOX2-OT-228ENST00000597828 TNFAIP1Q13829 316 aa15.2■□□□□ 0.02
SOX2-OT-228ENST00000597828 FBXO46Q6PJ61 603 aaPredicted RBP15.2■□□□□ 0.02
SOX2-OT-228ENST00000597828 ANKRD13AQ8IZ07 590 aa15.2■□□□□ 0.02
SOX2-OT-228ENST00000597828 OPTNQ96CV9 577 aa15.2■□□□□ 0.02
SOX2-OT-228ENST00000597828 FRAT2O75474 233 aaPredicted RBP15.19■□□□□ 0.02
SOX2-OT-228ENST00000597828 CAP1Q01518 475 aa15.19■□□□□ 0.02
SOX2-OT-228ENST00000597828 CRHR2Q13324 411 aa15.19■□□□□ 0.02
SOX2-OT-228ENST00000597828 PKN2Q16513 984 aaKnown RBP15.19■□□□□ 0.02
SOX2-OT-228ENST00000597828 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.19■□□□□ 0.02
SOX2-OT-228ENST00000597828 PTPN18Q99952 460 aa15.19■□□□□ 0.02
SOX2-OT-228ENST00000597828 MKI67P46013 3256 aaKnown RBP15.19■□□□□ 0.02
SOX2-OT-228ENST00000597828 SLC34A2O95436 690 aa15.18■□□□□ 0.02
SOX2-OT-228ENST00000597828 ALDH1A1P00352 501 aa15.18■□□□□ 0.02
SOX2-OT-228ENST00000597828 FGFR2P21802 821 aa15.18■□□□□ 0.02
SOX2-OT-228ENST00000597828 CAVIN4Q5BKX8 364 aa15.18■□□□□ 0.02
SOX2-OT-228ENST00000597828 SMC4Q9NTJ3 1288 aa15.18■□□□□ 0.02
SOX2-OT-228ENST00000597828 TRIM17Q9Y577 477 aa15.18■□□□□ 0.02
SOX2-OT-228ENST00000597828 INHBEP58166 350 aa15.17■□□□□ 0.02
SOX2-OT-228ENST00000597828 VGLL4Q14135 290 aa15.17■□□□□ 0.02
SOX2-OT-228ENST00000597828 PUM3Q15397 648 aaKnown RBP15.17■□□□□ 0.02
SOX2-OT-228ENST00000597828 OTOP1Q7RTM1 612 aa15.17■□□□□ 0.02
SOX2-OT-228ENST00000597828 CD99L2Q8TCZ2 262 aa15.17■□□□□ 0.02
SOX2-OT-228ENST00000597828 TEKT1Q969V4 418 aa15.17■□□□□ 0.02
SOX2-OT-228ENST00000597828 FOCADQ5VW36 1801 aa15.17■□□□□ 0.02
SOX2-OT-228ENST00000597828 DOCK3Q8IZD9 2030 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 UNCXA6NJT0 531 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 EYA2O00167 538 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 TNNI2P48788 182 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 ALDH1L2Q3SY69 923 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 ATG9AQ7Z3C6 839 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 TBC1D22AQ8WUA7 517 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 MS4A4AQ96JQ5 239 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 SIL1Q9H173 461 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 MAST2Q6P0Q8 1798 aa15.16■□□□□ 0.02
SOX2-OT-228ENST00000597828 TESPA1A2RU30 521 aaPredicted RBP15.15■□□□□ 0.02
SOX2-OT-228ENST00000597828 IFIT1P09914 478 aaKnown RBP15.15■□□□□ 0.02
SOX2-OT-228ENST00000597828 HDLBPQ00341 1268 aaKnown RBP15.15■□□□□ 0.02
SOX2-OT-228ENST00000597828 BRI3BPQ8WY22 251 aa15.15■□□□□ 0.02
SOX2-OT-228ENST00000597828 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
SOX2-OT-228ENST00000597828 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
SOX2-OT-228ENST00000597828 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
SOX2-OT-228ENST00000597828 SLC5A1P13866 664 aa15.14■□□□□ 0.01
SOX2-OT-228ENST00000597828 MAP3K9P80192 1104 aa15.14■□□□□ 0.01
SOX2-OT-228ENST00000597828 APOBEC3HQ6NTF7 200 aaKnown RBP15.14■□□□□ 0.01
SOX2-OT-228ENST00000597828 TRMT2AQ8IZ69 625 aaKnown RBP15.14■□□□□ 0.01
SOX2-OT-228ENST00000597828 SNCAIPQ9Y6H5 919 aa15.14■□□□□ 0.01
SOX2-OT-228ENST00000597828 SIPA1L1O43166 1804 aa15.14■□□□□ 0.01
SOX2-OT-228ENST00000597828 RPAP1Q9BWH6 1393 aaPredicted RBP15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 CCL15-CCL14A0A0B4J2E2 113 aa15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 UBTFL1P0CB47 393 aaPredicted RBP15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 DIXDC1Q155Q3 683 aa15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 CCL15Q16663 113 aa15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 FAM43AQ8N2R8 423 aa15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 WRNIP1Q96S55 665 aa15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 NOB1Q9ULX3 412 aaKnown RBP15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 PA2G4Q9UQ80 394 aaKnown RBP15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 CSADQ9Y600 493 aa15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 LRRFIP2Q9Y608 721 aaKnown RBP15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 MAST3O60307 1309 aa15.13■□□□□ 0.01
SOX2-OT-228ENST00000597828 POTEFA5A3E0 1075 aa15.12■□□□□ 0.01
SOX2-OT-228ENST00000597828 PRDX5P30044 214 aa15.12■□□□□ 0.01
SOX2-OT-228ENST00000597828 TAF1CQ15572 869 aaPredicted RBP15.12■□□□□ 0.01
SOX2-OT-228ENST00000597828 OTUD7BQ6GQQ9 843 aa15.12■□□□□ 0.01
SOX2-OT-228ENST00000597828 LPIN2Q92539 896 aa15.12■□□□□ 0.01
SOX2-OT-228ENST00000597828 ZKSCAN4Q969J2 545 aaPredicted RBP15.12■□□□□ 0.01
SOX2-OT-228ENST00000597828 ERO1AQ96HE7 468 aa15.12■□□□□ 0.01
SOX2-OT-228ENST00000597828 TMOD2Q9NZR1 351 aa15.12■□□□□ 0.01
SOX2-OT-228ENST00000597828 DAGLAQ9Y4D2 1042 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms