RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 TRIM27P14373 513 aa19.99■□□□□ 0.79
USHBP1-206ENST00000596436 OTOP1Q7RTM1 612 aa19.99■□□□□ 0.79
USHBP1-206ENST00000596436 ANKRD13AQ8IZ07 590 aa19.99■□□□□ 0.79
USHBP1-206ENST00000596436 SUCLG2Q96I99 432 aa19.99■□□□□ 0.79
USHBP1-206ENST00000596436 FAM84BQ96KN1 310 aaPredicted RBP19.99■□□□□ 0.79
USHBP1-206ENST00000596436 TEPSINQ96N21 525 aa19.99■□□□□ 0.79
USHBP1-206ENST00000596436 VEZTQ9HBM0 779 aa19.99■□□□□ 0.79
USHBP1-206ENST00000596436 CNNM1Q9NRU3 951 aa19.99■□□□□ 0.79
USHBP1-206ENST00000596436 JAG2Q9Y219 1238 aa19.99■□□□□ 0.79
USHBP1-206ENST00000596436 BRCA2P51587 3418 aa19.98■□□□□ 0.79
USHBP1-206ENST00000596436 IREB2P48200 963 aaKnown RBP19.98■□□□□ 0.79
USHBP1-206ENST00000596436 USP44Q9H0E7 712 aa19.98■□□□□ 0.79
USHBP1-206ENST00000596436 HIBADHP31937 336 aaKnown RBP19.97■□□□□ 0.79
USHBP1-206ENST00000596436 TNFAIP1Q13829 316 aa19.97■□□□□ 0.79
USHBP1-206ENST00000596436 TAF7LQ5H9L4 462 aa19.97■□□□□ 0.79
USHBP1-206ENST00000596436 MFSD14BQ5SR56 506 aa19.97■□□□□ 0.79
USHBP1-206ENST00000596436 ATF7IPQ6VMQ6 1270 aa19.97■□□□□ 0.79
USHBP1-206ENST00000596436 PTPN18Q99952 460 aa19.97■□□□□ 0.79
USHBP1-206ENST00000596436 ZNF70Q9UC06 446 aaPredicted RBP19.97■□□□□ 0.79
USHBP1-206ENST00000596436 RIPOR2Q9Y4F9 1068 aa19.97■□□□□ 0.79
USHBP1-206ENST00000596436 IPO8O15397 1037 aaKnown RBP19.96■□□□□ 0.79
USHBP1-206ENST00000596436 PLIN1O60240 522 aa19.96■□□□□ 0.79
USHBP1-206ENST00000596436 GYG1P46976 350 aa19.96■□□□□ 0.79
USHBP1-206ENST00000596436 RABL6Q3YEC7 729 aaPredicted RBP19.96■□□□□ 0.79
USHBP1-206ENST00000596436 PUS3Q9BZE2 481 aaKnown RBP19.96■□□□□ 0.79
USHBP1-206ENST00000596436 TTF2Q9UNY4 1162 aaKnown RBP19.96■□□□□ 0.79
USHBP1-206ENST00000596436 TRIM17Q9Y577 477 aa19.96■□□□□ 0.79
USHBP1-206ENST00000596436 CRHR2Q13324 411 aa19.95■□□□□ 0.78
USHBP1-206ENST00000596436 ZKSCAN2Q63HK3 967 aa19.95■□□□□ 0.78
USHBP1-206ENST00000596436 INTS3Q68E01 1043 aaKnown RBP19.95■□□□□ 0.78
USHBP1-206ENST00000596436 CLUAP1Q96AJ1 413 aa19.95■□□□□ 0.78
USHBP1-206ENST00000596436 ERO1AQ96HE7 468 aa19.95■□□□□ 0.78
USHBP1-206ENST00000596436 MS4A4AQ96JQ5 239 aa19.95■□□□□ 0.78
USHBP1-206ENST00000596436 RBM5P52756 815 aaKnown RBP eCLIP19.94■□□□□ 0.78
USHBP1-206ENST00000596436 OTUD7BQ6GQQ9 843 aa19.94■□□□□ 0.78
USHBP1-206ENST00000596436 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.94■□□□□ 0.78
USHBP1-206ENST00000596436 FBXO33Q7Z6M2 555 aa19.94■□□□□ 0.78
USHBP1-206ENST00000596436 CDAN1Q8IWY9 1227 aa19.94■□□□□ 0.78
USHBP1-206ENST00000596436 DZIP1LQ8IYY4 767 aaKnown RBP19.94■□□□□ 0.78
USHBP1-206ENST00000596436 TDRD3Q9H7E2 651 aaKnown RBP19.94■□□□□ 0.78
USHBP1-206ENST00000596436 MROH5Q6ZUA9 1318 aa19.94■□□□□ 0.78
USHBP1-206ENST00000596436 ANKRD44Q8N8A2 993 aa19.93■□□□□ 0.78
USHBP1-206ENST00000596436 VGLL2Q8N8G2 317 aa19.93■□□□□ 0.78
USHBP1-206ENST00000596436 BICC1Q9H694 974 aaKnown RBP19.93■□□□□ 0.78
USHBP1-206ENST00000596436 PTPN22Q9Y2R2 807 aa19.93■□□□□ 0.78
USHBP1-206ENST00000596436 CRKP46108 304 aa19.92■□□□□ 0.78
USHBP1-206ENST00000596436 HDLBPQ00341 1268 aaKnown RBP19.92■□□□□ 0.78
USHBP1-206ENST00000596436 CAP1Q01518 475 aa19.92■□□□□ 0.78
USHBP1-206ENST00000596436 GRIK5Q16478 980 aa19.92■□□□□ 0.78
USHBP1-206ENST00000596436 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.92■□□□□ 0.78
USHBP1-206ENST00000596436 ARMC5Q96C12 935 aa19.92■□□□□ 0.78
USHBP1-206ENST00000596436 OPTNQ96CV9 577 aa19.92■□□□□ 0.78
USHBP1-206ENST00000596436 ELP3Q9H9T3 547 aa19.92■□□□□ 0.78
USHBP1-206ENST00000596436 CD99L2Q8TCZ2 262 aa19.91■□□□□ 0.78
USHBP1-206ENST00000596436 MEIS3Q99687 375 aa19.91■□□□□ 0.78
USHBP1-206ENST00000596436 RCAN3Q9UKA8 241 aa19.91■□□□□ 0.78
USHBP1-206ENST00000596436 POTEFA5A3E0 1075 aa19.9■□□□□ 0.78
USHBP1-206ENST00000596436 RLBP1P12271 317 aa19.9■□□□□ 0.78
USHBP1-206ENST00000596436 SP3Q02447 781 aa19.9■□□□□ 0.78
USHBP1-206ENST00000596436 VGLL4Q14135 290 aa19.9■□□□□ 0.78
USHBP1-206ENST00000596436 TMEM57Q8N5G2 664 aa19.9■□□□□ 0.78
USHBP1-206ENST00000596436 BRI3BPQ8WY22 251 aa19.9■□□□□ 0.78
USHBP1-206ENST00000596436 MRIQ9BWK5 157 aa19.9■□□□□ 0.78
USHBP1-206ENST00000596436 TMEM39BQ9GZU3 492 aa19.9■□□□□ 0.78
USHBP1-206ENST00000596436 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.9■□□□□ 0.78
USHBP1-206ENST00000596436 TNNI2P48788 182 aa19.89■□□□□ 0.77
USHBP1-206ENST00000596436 TBC1D22AQ8WUA7 517 aa19.89■□□□□ 0.77
USHBP1-206ENST00000596436 CNKSR2Q8WXI2 1034 aa19.89■□□□□ 0.77
USHBP1-206ENST00000596436 EFCC1Q9HA90 598 aa19.89■□□□□ 0.77
USHBP1-206ENST00000596436 TCP10L2B9ZVM9 353 aa19.88■□□□□ 0.77
USHBP1-206ENST00000596436 PDE8BO95263 885 aa19.88■□□□□ 0.77
USHBP1-206ENST00000596436 UBTFL1P0CB47 393 aaPredicted RBP19.88■□□□□ 0.77
USHBP1-206ENST00000596436 MAP3K9P80192 1104 aa19.88■□□□□ 0.77
USHBP1-206ENST00000596436 LRRC24Q50LG9 513 aa19.88■□□□□ 0.77
USHBP1-206ENST00000596436 SPDYE5A6NIY4 337 aa19.87■□□□□ 0.77
USHBP1-206ENST00000596436 GTF2A2P52657 109 aa19.87■□□□□ 0.77
USHBP1-206ENST00000596436 FKBP1CQ5VVH2 108 aa19.87■□□□□ 0.77
USHBP1-206ENST00000596436 ZDHHC15Q96MV8 337 aa19.87■□□□□ 0.77
USHBP1-206ENST00000596436 RPAP1Q9BWH6 1393 aaPredicted RBP19.86■□□□□ 0.77
USHBP1-206ENST00000596436 FAM83AQ86UY5 434 aa19.86■□□□□ 0.77
USHBP1-206ENST00000596436 TEKT1Q969V4 418 aa19.86■□□□□ 0.77
USHBP1-206ENST00000596436 IQSEC3Q9UPP2 1182 aaPredicted RBP19.86■□□□□ 0.77
USHBP1-206ENST00000596436 SUGT1Q9Y2Z0 365 aa19.86■□□□□ 0.77
USHBP1-206ENST00000596436 LRRFIP2Q9Y608 721 aaKnown RBP19.86■□□□□ 0.77
USHBP1-206ENST00000596436 CCL15-CCL14A0A0B4J2E2 113 aa19.85■□□□□ 0.77
USHBP1-206ENST00000596436 FGFR2P21802 821 aa19.85■□□□□ 0.77
USHBP1-206ENST00000596436 CCL15Q16663 113 aa19.85■□□□□ 0.77
USHBP1-206ENST00000596436 CAVIN4Q5BKX8 364 aa19.85■□□□□ 0.77
USHBP1-206ENST00000596436 METTL24Q5JXM2 366 aa19.85■□□□□ 0.77
USHBP1-206ENST00000596436 APOBEC3HQ6NTF7 200 aaKnown RBP19.85■□□□□ 0.77
USHBP1-206ENST00000596436 FTSJ3Q8IY81 847 aaKnown RBP19.85■□□□□ 0.77
USHBP1-206ENST00000596436 FAM43AQ8N2R8 423 aa19.85■□□□□ 0.77
USHBP1-206ENST00000596436 ZCCHC17Q9NP64 241 aaKnown RBP19.85■□□□□ 0.77
USHBP1-206ENST00000596436 SNCAIPQ9Y6H5 919 aa19.85■□□□□ 0.77
USHBP1-206ENST00000596436 KIAA0100Q14667 2235 aaKnown RBP19.85■□□□□ 0.77
USHBP1-206ENST00000596436 VPS37DQ86XT2 251 aa19.84■□□□□ 0.77
USHBP1-206ENST00000596436 PANK1Q8TE04 598 aa19.84■□□□□ 0.77
USHBP1-206ENST00000596436 GCC1Q96CN9 775 aa19.84■□□□□ 0.77
USHBP1-206ENST00000596436 ZNF333Q96JL9 665 aa19.84■□□□□ 0.77
USHBP1-206ENST00000596436 CSADQ9Y600 493 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms