RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 CST9Q5W186 159 aa22.4■■□□□ 1.18
ZNF558-204ENST00000596172 HHIPL2Q6UWX4 724 aa22.4■■□□□ 1.18
ZNF558-204ENST00000596172 SPATA5Q8NB90 893 aa22.4■■□□□ 1.18
ZNF558-204ENST00000596172 TEKT1Q969V4 418 aa22.4■■□□□ 1.18
ZNF558-204ENST00000596172 CCDC8Q9H0W5 538 aaPredicted RBP22.4■■□□□ 1.18
ZNF558-204ENST00000596172 ADM5C9JUS6 153 aa22.39■■□□□ 1.17
ZNF558-204ENST00000596172 LDHBP07195 334 aaKnown RBP22.39■■□□□ 1.17
ZNF558-204ENST00000596172 RBM5P52756 815 aaKnown RBP eCLIP22.39■■□□□ 1.17
ZNF558-204ENST00000596172 SPTY2D1Q68D10 685 aaPredicted RBP22.39■■□□□ 1.17
ZNF558-204ENST00000596172 AACSQ86V21 672 aa22.39■■□□□ 1.17
ZNF558-204ENST00000596172 APOBEC3FQ8IUX4 373 aaKnown RBP22.39■■□□□ 1.17
ZNF558-204ENST00000596172 DNAJC5GQ8N7S2 189 aa22.39■■□□□ 1.17
ZNF558-204ENST00000596172 ZDHHC15Q96MV8 337 aa22.39■■□□□ 1.17
ZNF558-204ENST00000596172 IL1RAPL2Q9NP60 686 aa22.39■■□□□ 1.17
ZNF558-204ENST00000596172 PCDHAC2Q9Y5I4 1007 aa22.39■■□□□ 1.17
ZNF558-204ENST00000596172 PRDX5P30044 214 aa22.38■■□□□ 1.17
ZNF558-204ENST00000596172 MCAMP43121 646 aa22.38■■□□□ 1.17
ZNF558-204ENST00000596172 TTC39AQ5SRH9 613 aa22.38■■□□□ 1.17
ZNF558-204ENST00000596172 TLR7Q9NYK1 1049 aaKnown RBP22.38■■□□□ 1.17
ZNF558-204ENST00000596172 CELF2O95319 508 aaKnown RBP22.37■■□□□ 1.17
ZNF558-204ENST00000596172 HTRA3P83110 453 aa22.37■■□□□ 1.17
ZNF558-204ENST00000596172 APBB1O00213 710 aa22.36■■□□□ 1.17
ZNF558-204ENST00000596172 IGSF3O75054 1194 aa22.36■■□□□ 1.17
ZNF558-204ENST00000596172 SPDYE2Q495Y8 402 aa22.36■■□□□ 1.17
ZNF558-204ENST00000596172 LRRCC1Q9C099 1032 aa22.36■■□□□ 1.17
ZNF558-204ENST00000596172 APOBEC3HQ6NTF7 200 aaKnown RBP22.35■■□□□ 1.17
ZNF558-204ENST00000596172 PI16Q6UXB8 463 aa22.35■■□□□ 1.17
ZNF558-204ENST00000596172 DLK2Q6UY11 383 aa22.35■■□□□ 1.17
ZNF558-204ENST00000596172 CDCA5Q96FF9 252 aa22.35■■□□□ 1.17
ZNF558-204ENST00000596172 FAM163AQ96GL9 167 aaPredicted RBP22.35■■□□□ 1.17
ZNF558-204ENST00000596172 ZNF70Q9UC06 446 aaPredicted RBP22.35■■□□□ 1.17
ZNF558-204ENST00000596172 ABCF2Q9UG63 623 aa22.35■■□□□ 1.17
ZNF558-204ENST00000596172 PPP2R3BQ9Y5P8 575 aa22.35■■□□□ 1.17
ZNF558-204ENST00000596172 IFIT2P09913 472 aaKnown RBP22.34■■□□□ 1.17
ZNF558-204ENST00000596172 HDAC1Q13547 482 aaPredicted RBP22.34■■□□□ 1.17
ZNF558-204ENST00000596172 ERICH6Q7L0X2 663 aa22.34■■□□□ 1.17
ZNF558-204ENST00000596172 AOX1Q06278 1338 aa22.33■■□□□ 1.17
ZNF558-204ENST00000596172 SLF2Q8IX21 1173 aa22.33■■□□□ 1.17
ZNF558-204ENST00000596172 DEFB129Q9H1M3 183 aa22.33■■□□□ 1.17
ZNF558-204ENST00000596172 TDRD3Q9H7E2 651 aaKnown RBP22.33■■□□□ 1.17
ZNF558-204ENST00000596172 TLL2Q9Y6L7 1015 aa22.33■■□□□ 1.17
ZNF558-204ENST00000596172 MYH13Q9UKX3 1938 aa22.32■■□□□ 1.16
ZNF558-204ENST00000596172 CLRN2A0PK11 232 aa22.32■■□□□ 1.16
ZNF558-204ENST00000596172 RASSF10A6NK89 507 aa22.32■■□□□ 1.16
ZNF558-204ENST00000596172 TNFAIP1Q13829 316 aa22.32■■□□□ 1.16
ZNF558-204ENST00000596172 FKBP1CQ5VVH2 108 aa22.32■■□□□ 1.16
ZNF558-204ENST00000596172 DZIP1Q86YF9 867 aaKnown RBP22.32■■□□□ 1.16
ZNF558-204ENST00000596172 EXOC6Q8TAG9 804 aa22.32■■□□□ 1.16
ZNF558-204ENST00000596172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.32■■□□□ 1.16
ZNF558-204ENST00000596172 KLRG1Q96E93 195 aa22.32■■□□□ 1.16
ZNF558-204ENST00000596172 ZNF408Q9H9D4 720 aa22.32■■□□□ 1.16
ZNF558-204ENST00000596172 DAGLAQ9Y4D2 1042 aa22.32■■□□□ 1.16
ZNF558-204ENST00000596172 POLR2AP24928 1970 aaKnown RBP22.32■■□□□ 1.16
ZNF558-204ENST00000596172 CYP2E1P05181 493 aaPredicted RBP22.31■■□□□ 1.16
ZNF558-204ENST00000596172 DIXDC1Q155Q3 683 aa22.31■■□□□ 1.16
ZNF558-204ENST00000596172 TBC1D9Q6ZT07 1266 aa22.31■■□□□ 1.16
ZNF558-204ENST00000596172 SAPCD2Q86UD0 394 aa22.31■■□□□ 1.16
ZNF558-204ENST00000596172 C2orf69Q8N8R5 385 aa22.31■■□□□ 1.16
ZNF558-204ENST00000596172 HHIPL1Q96JK4 782 aa22.31■■□□□ 1.16
ZNF558-204ENST00000596172 VEZTQ9HBM0 779 aa22.31■■□□□ 1.16
ZNF558-204ENST00000596172 SNRKQ9NRH2 765 aa22.31■■□□□ 1.16
ZNF558-204ENST00000596172 ABT1Q9ULW3 272 aaKnown RBP22.31■■□□□ 1.16
ZNF558-204ENST00000596172 SCAF8Q9UPN6 1271 aaKnown RBP22.31■■□□□ 1.16
ZNF558-204ENST00000596172 GAKO14976 1311 aa22.31■■□□□ 1.16
ZNF558-204ENST00000596172 CNTNAP1P78357 1384 aa22.3■■□□□ 1.16
ZNF558-204ENST00000596172 ZAP70P43403 619 aa22.3■■□□□ 1.16
ZNF558-204ENST00000596172 FKBP1BP68106 108 aa22.3■■□□□ 1.16
ZNF558-204ENST00000596172 MECOMQ03112 1051 aa22.3■■□□□ 1.16
ZNF558-204ENST00000596172 DEFB115Q30KQ5 88 aa22.3■■□□□ 1.16
ZNF558-204ENST00000596172 GBA2Q9HCG7 927 aaPredicted RBP22.3■■□□□ 1.16
ZNF558-204ENST00000596172 TRPM7Q96QT4 1865 aa22.29■■□□□ 1.16
ZNF558-204ENST00000596172 GSTO1P78417 241 aa22.29■■□□□ 1.16
ZNF558-204ENST00000596172 NSUN4Q96CB9 384 aaKnown RBP22.29■■□□□ 1.16
ZNF558-204ENST00000596172 LRP2BPQ9P2M1 347 aa22.29■■□□□ 1.16
ZNF558-204ENST00000596172 SMARCA5O60264 1052 aaPredicted RBP22.28■■□□□ 1.16
ZNF558-204ENST00000596172 LDHCP07864 332 aa22.28■■□□□ 1.16
ZNF558-204ENST00000596172 NF2P35240 595 aa22.28■■□□□ 1.16
ZNF558-204ENST00000596172 TNNI2P48788 182 aa22.28■■□□□ 1.16
ZNF558-204ENST00000596172 RASA3Q14644 834 aa22.28■■□□□ 1.16
ZNF558-204ENST00000596172 PRAMEF18Q5VWM3 479 aa22.28■■□□□ 1.16
ZNF558-204ENST00000596172 ZNF384Q8TF68 577 aa22.28■■□□□ 1.16
ZNF558-204ENST00000596172 GCC1Q96CN9 775 aa22.28■■□□□ 1.16
ZNF558-204ENST00000596172 TMOD2Q9NZR1 351 aa22.28■■□□□ 1.16
ZNF558-204ENST00000596172 RAI14Q9P0K7 980 aa22.28■■□□□ 1.16
ZNF558-204ENST00000596172 ATP5JP18859 108 aa22.27■■□□□ 1.16
ZNF558-204ENST00000596172 SUPT20HL1Q3ZLR7 823 aa22.27■■□□□ 1.16
ZNF558-204ENST00000596172 CDC42EP5Q6NZY7 148 aa22.27■■□□□ 1.16
ZNF558-204ENST00000596172 TMED8Q6PL24 325 aaPredicted RBP22.27■■□□□ 1.16
ZNF558-204ENST00000596172 FAM83AQ86UY5 434 aa22.27■■□□□ 1.16
ZNF558-204ENST00000596172 GPR75-ASB3A0A0A6YYF3 556 aa22.26■■□□□ 1.15
ZNF558-204ENST00000596172 JMYQ8N9B5 988 aa22.26■■□□□ 1.15
ZNF558-204ENST00000596172 RWDD1Q9H446 243 aaPredicted RBP22.26■■□□□ 1.15
ZNF558-204ENST00000596172 PIH1D3Q9NQM4 214 aaKnown RBP22.26■■□□□ 1.15
ZNF558-204ENST00000596172 MKRN1Q9UHC7 482 aaKnown RBP22.26■■□□□ 1.15
ZNF558-204ENST00000596172 MROH7-TTC4A0A0A0MT08 1334 aa22.26■■□□□ 1.15
ZNF558-204ENST00000596172 AKAP11Q9UKA4 1901 aa22.25■■□□□ 1.15
ZNF558-204ENST00000596172 ECM29Q5VYK3 1845 aa22.25■■□□□ 1.15
ZNF558-204ENST00000596172 TCP10L2B9ZVM9 353 aa22.25■■□□□ 1.15
ZNF558-204ENST00000596172 MAP4K4O95819 1239 aaPredicted RBP22.25■■□□□ 1.15
ZNF558-204ENST00000596172 USP40Q9NVE5 1235 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms