RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 WDR66Q8TBY9 1149 aa27.65■■■□□ 2.02
GTF2F1-204ENST00000594965 XAGE2Q96GT9 111 aa27.65■■■□□ 2.02
GTF2F1-204ENST00000594965 TDRD3Q9H7E2 651 aaKnown RBP27.65■■■□□ 2.02
GTF2F1-204ENST00000594965 VEZTQ9HBM0 779 aa27.65■■■□□ 2.02
GTF2F1-204ENST00000594965 ZNF70Q9UC06 446 aaPredicted RBP27.65■■■□□ 2.02
GTF2F1-204ENST00000594965 AKAP2Q9Y2D5 859 aa27.65■■■□□ 2.02
GTF2F1-204ENST00000594965 SUGT1Q9Y2Z0 365 aa27.65■■■□□ 2.02
GTF2F1-204ENST00000594965 G3BP1Q13283 466 aaKnown RBP eCLIP27.64■■■□□ 2.021e-8■■■■■ 33.6
GTF2F1-204ENST00000594965 MRIQ9BWK5 157 aa27.64■■■□□ 2.02
GTF2F1-204ENST00000594965 GNL3LQ9NVN8 582 aaKnown RBP27.64■■■□□ 2.02
GTF2F1-204ENST00000594965 SSC5DA1L4H1 1573 aa27.64■■■□□ 2.01
GTF2F1-204ENST00000594965 ZNF157P51786 506 aaPredicted RBP27.63■■■□□ 2.01
GTF2F1-204ENST00000594965 AIDAQ96BJ3 306 aa27.63■■■□□ 2.01
GTF2F1-204ENST00000594965 PPP2R3BQ9Y5P8 575 aa27.63■■■□□ 2.01
GTF2F1-204ENST00000594965 UBE2Q2LH0YL09 131 aa27.62■■■□□ 2.01
GTF2F1-204ENST00000594965 SEMA3EO15041 775 aa27.62■■■□□ 2.01
GTF2F1-204ENST00000594965 SLC10A3P09131 477 aa27.62■■■□□ 2.01
GTF2F1-204ENST00000594965 NF2P35240 595 aa27.62■■■□□ 2.01
GTF2F1-204ENST00000594965 NOGQ13253 232 aa27.62■■■□□ 2.01
GTF2F1-204ENST00000594965 TEKT1Q969V4 418 aa27.62■■■□□ 2.01
GTF2F1-204ENST00000594965 CCDC102AQ96A19 550 aa27.62■■■□□ 2.01
GTF2F1-204ENST00000594965 DENND2AQ9ULE3 1009 aa27.62■■■□□ 2.01
GTF2F1-204ENST00000594965 MYH2Q9UKX2 1941 aa27.61■■■□□ 2.01
GTF2F1-204ENST00000594965 MS4A1P11836 297 aa27.61■■■□□ 2.01
GTF2F1-204ENST00000594965 ZDHHC15Q96MV8 337 aa27.61■■■□□ 2.01
GTF2F1-204ENST00000594965 FZD1Q9UP38 647 aa27.61■■■□□ 2.01
GTF2F1-204ENST00000594965 SALL1Q9NSC2 1324 aa27.61■■■□□ 2.01
GTF2F1-204ENST00000594965 CTCFP49711 727 aaPredicted RBP27.6■■■□□ 2.01
GTF2F1-204ENST00000594965 RASA3Q14644 834 aa27.6■■■□□ 2.01
GTF2F1-204ENST00000594965 MVPQ14764 893 aaKnown RBP27.6■■■□□ 2.01
GTF2F1-204ENST00000594965 CEP85Q6P2H3 762 aa27.6■■■□□ 2.01
GTF2F1-204ENST00000594965 RASAL3Q86YV0 1011 aa27.6■■■□□ 2.01
GTF2F1-204ENST00000594965 MAST3O60307 1309 aa27.6■■■□□ 2.01
GTF2F1-204ENST00000594965 AKAP11Q9UKA4 1901 aa27.59■■■□□ 2.01
GTF2F1-204ENST00000594965 PRDX5P30044 214 aa27.59■■■□□ 2.01
GTF2F1-204ENST00000594965 RASGRF1Q13972 1273 aa27.59■■■□□ 2.01
GTF2F1-204ENST00000594965 PRKG1Q13976 671 aa27.59■■■□□ 2.01
GTF2F1-204ENST00000594965 TTLL12Q14166 644 aaPredicted RBP27.59■■■□□ 2.01
GTF2F1-204ENST00000594965 APOBEC3HQ6NTF7 200 aaKnown RBP27.59■■■□□ 2.01
GTF2F1-204ENST00000594965 HHIPL2Q6UWX4 724 aa27.59■■■□□ 2.01
GTF2F1-204ENST00000594965 NEUROD6Q96NK8 337 aa27.59■■■□□ 2.01
GTF2F1-204ENST00000594965 NOP58Q9Y2X3 529 aaKnown RBP27.59■■■□□ 2.01
GTF2F1-204ENST00000594965 SURF6O75683 361 aaKnown RBP27.58■■■□□ 2.01
GTF2F1-204ENST00000594965 HSPA8P11142 646 aaKnown RBP27.58■■■□□ 2.01
GTF2F1-204ENST00000594965 NBPF12Q5TAG4 269 aaPredicted RBP27.58■■■□□ 2.01
GTF2F1-204ENST00000594965 COG6Q9Y2V7 657 aa27.58■■■□□ 2.01
GTF2F1-204ENST00000594965 OTOFQ9HC10 1997 aa27.57■■■□□ 2
GTF2F1-204ENST00000594965 KIF23Q02241 960 aaPredicted RBP27.57■■■□□ 2
GTF2F1-204ENST00000594965 PDS5AQ29RF7 1337 aaKnown RBP27.57■■■□□ 2
GTF2F1-204ENST00000594965 TCP10L2B9ZVM9 353 aa27.56■■■□□ 2
GTF2F1-204ENST00000594965 LBX1P52954 281 aa27.56■■■□□ 2
GTF2F1-204ENST00000594965 TNFAIP1Q13829 316 aa27.56■■■□□ 2
GTF2F1-204ENST00000594965 CDAN1Q8IWY9 1227 aa27.56■■■□□ 2
GTF2F1-204ENST00000594965 TEPSINQ96N21 525 aa27.56■■■□□ 2
GTF2F1-204ENST00000594965 ANGEL1Q9UNK9 670 aaKnown RBP27.56■■■□□ 2
GTF2F1-204ENST00000594965 DIXDC1Q155Q3 683 aa27.55■■■□□ 2
GTF2F1-204ENST00000594965 MAP3K11Q16584 847 aa27.55■■■□□ 2
GTF2F1-204ENST00000594965 LDLRAD1Q5T700 205 aa27.55■■■□□ 2
GTF2F1-204ENST00000594965 C20orf194Q5TEA3 1177 aa27.55■■■□□ 2
GTF2F1-204ENST00000594965 ARMC9Q7Z3E5 817 aa27.55■■■□□ 2
GTF2F1-204ENST00000594965 BEGAINQ9BUH8 593 aa27.55■■■□□ 2
GTF2F1-204ENST00000594965 GPR108Q9NPR9 543 aa27.55■■■□□ 2
GTF2F1-204ENST00000594965 PRDM10Q9NQV6 1147 aa27.55■■■□□ 2
GTF2F1-204ENST00000594965 LDHBP07195 334 aaKnown RBP27.54■■■□□ 2
GTF2F1-204ENST00000594965 CACNB3P54284 484 aa27.54■■■□□ 2
GTF2F1-204ENST00000594965 SUPT20HL1Q3ZLR7 823 aa27.54■■■□□ 2
GTF2F1-204ENST00000594965 DDX19BQ9UMR2 479 aa27.54■■■□□ 2
GTF2F1-204ENST00000594965 DAGLAQ9Y4D2 1042 aa27.54■■■□□ 2
GTF2F1-204ENST00000594965 OS9Q13438 667 aaPredicted RBP27.53■■■□□ 2
GTF2F1-204ENST00000594965 TNNI3KQ59H18 835 aa27.53■■■□□ 2
GTF2F1-204ENST00000594965 TMEM39BQ9GZU3 492 aa27.53■■■□□ 2
GTF2F1-204ENST00000594965 ZBTB40Q9NUA8 1239 aa27.53■■■□□ 2
GTF2F1-204ENST00000594965 TSKSQ9UJT2 592 aa27.53■■■□□ 2
GTF2F1-204ENST00000594965 FPGT-TNNI3KV9GXZ4 949 aa27.53■■■□□ 2
GTF2F1-204ENST00000594965 LAMB1P07942 1786 aa27.53■■■□□ 2
GTF2F1-204ENST00000594965 ARID4AP29374 1257 aaPredicted RBP27.52■■■□□ 2
GTF2F1-204ENST00000594965 ZGPATQ8N5A5 531 aaKnown RBP27.52■■■□□ 2
GTF2F1-204ENST00000594965 CSRNP1Q96S65 589 aa27.52■■■□□ 2
GTF2F1-204ENST00000594965 HMG20BQ9P0W2 317 aa27.52■■■□□ 2
GTF2F1-204ENST00000594965 MYO5AQ9Y4I1 1855 aaKnown RBP27.52■■■□□ 2
GTF2F1-204ENST00000594965 USP2O75604 605 aaPredicted RBP27.51■■□□□ 1.99
GTF2F1-204ENST00000594965 TNNI2P48788 182 aa27.51■■□□□ 1.99
GTF2F1-204ENST00000594965 PI16Q6UXB8 463 aa27.51■■□□□ 1.99
GTF2F1-204ENST00000594965 PPP1R12BO60237 982 aaPredicted RBP27.5■■□□□ 1.99
GTF2F1-204ENST00000594965 GORABQ5T7V8 394 aa27.5■■□□□ 1.99
GTF2F1-204ENST00000594965 DBNDD2Q9BQY9 259 aa27.5■■□□□ 1.99
GTF2F1-204ENST00000594965 MCAMP43121 646 aa27.49■■□□□ 1.99
GTF2F1-204ENST00000594965 PDE3AQ14432 1141 aa27.49■■□□□ 1.99
GTF2F1-204ENST00000594965 FKBP1CQ5VVH2 108 aa27.49■■□□□ 1.99
GTF2F1-204ENST00000594965 SIRT2Q8IXJ6 389 aa27.49■■□□□ 1.99
GTF2F1-204ENST00000594965 SPATA5Q8NB90 893 aa27.49■■□□□ 1.99
GTF2F1-204ENST00000594965 ABCF2Q9UG63 623 aa27.49■■□□□ 1.99
GTF2F1-204ENST00000594965 EXOC6BQ9Y2D4 811 aa27.49■■□□□ 1.99
GTF2F1-204ENST00000594965 CASP8AP2Q9UKL3 1982 aa27.48■■□□□ 1.99
GTF2F1-204ENST00000594965 AK9Q5TCS8 1911 aa27.48■■□□□ 1.99
GTF2F1-204ENST00000594965 CA12O43570 354 aa27.48■■□□□ 1.99
GTF2F1-204ENST00000594965 CDC42EP5Q6NZY7 148 aa27.48■■□□□ 1.99
GTF2F1-204ENST00000594965 FAM83AQ86UY5 434 aa27.48■■□□□ 1.99
GTF2F1-204ENST00000594965 TMOD2Q9NZR1 351 aa27.48■■□□□ 1.99
GTF2F1-204ENST00000594965 GAKO14976 1311 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms