RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 STRBPQ96SI9 672 aaKnown RBP24.86■■□□□ 1.57
PNKP-203ENST00000593946 MYH2Q9UKX2 1941 aa24.86■■□□□ 1.57
PNKP-203ENST00000593946 PTGER2P43116 358 aa24.86■■□□□ 1.57
PNKP-203ENST00000593946 MECOMQ03112 1051 aa24.86■■□□□ 1.57
PNKP-203ENST00000593946 NAA16Q6N069 864 aaPredicted RBP24.86■■□□□ 1.57
PNKP-203ENST00000593946 ADGRA1Q86SQ6 560 aa24.86■■□□□ 1.57
PNKP-203ENST00000593946 IL27Q8NEV9 243 aa24.86■■□□□ 1.57
PNKP-203ENST00000593946 FAM205AQ6ZU69 1335 aa24.85■■□□□ 1.57
PNKP-203ENST00000593946 ST18O60284 1047 aa24.85■■□□□ 1.57
PNKP-203ENST00000593946 MBD4O95243 580 aa24.85■■□□□ 1.57
PNKP-203ENST00000593946 NEK4P51957 841 aa24.85■■□□□ 1.57
PNKP-203ENST00000593946 GRIPAP1Q4V328 841 aa24.85■■□□□ 1.57
PNKP-203ENST00000593946 RPAP1Q9BWH6 1393 aaPredicted RBP24.84■■□□□ 1.57
PNKP-203ENST00000593946 ZNF646O15015 1829 aaPredicted RBP24.84■■□□□ 1.57
PNKP-203ENST00000593946 C21orf2O43822 256 aa24.84■■□□□ 1.57
PNKP-203ENST00000593946 TM6SF1Q9BZW5 370 aa24.84■■□□□ 1.57
PNKP-203ENST00000593946 CYP21A2P08686 494 aa24.83■■□□□ 1.57
PNKP-203ENST00000593946 ADCK5Q3MIX3 580 aa24.83■■□□□ 1.57
PNKP-203ENST00000593946 TAF6LQ9Y6J9 622 aa24.83■■□□□ 1.57
PNKP-203ENST00000593946 SCN9AQ15858 1988 aa24.83■■□□□ 1.57
PNKP-203ENST00000593946 LDHBP07195 334 aaKnown RBP24.83■■□□□ 1.57
PNKP-203ENST00000593946 UPF3BQ9BZI7 483 aaKnown RBP24.83■■□□□ 1.57
PNKP-203ENST00000593946 CCDC93Q567U6 631 aa24.82■■□□□ 1.56
PNKP-203ENST00000593946 LCORLQ8N3X6 602 aa24.82■■□□□ 1.56
PNKP-203ENST00000593946 MIGA1Q8NAN2 632 aa24.82■■□□□ 1.56
PNKP-203ENST00000593946 TBC1D22AQ8WUA7 517 aa24.82■■□□□ 1.56
PNKP-203ENST00000593946 ARMT1Q9H993 441 aa24.82■■□□□ 1.56
PNKP-203ENST00000593946 PIM2Q9P1W9 311 aa24.82■■□□□ 1.56
PNKP-203ENST00000593946 CTNNA3Q9UI47 895 aa24.82■■□□□ 1.56
PNKP-203ENST00000593946 CD2APQ9Y5K6 639 aa24.82■■□□□ 1.56
PNKP-203ENST00000593946 FGAP02671 866 aa24.81■■□□□ 1.56
PNKP-203ENST00000593946 JAKMIP1Q96N16 626 aaKnown RBP24.81■■□□□ 1.56
PNKP-203ENST00000593946 GNAT2P19087 354 aa24.81■■□□□ 1.56
PNKP-203ENST00000593946 CASTP20810 708 aaKnown RBP24.81■■□□□ 1.56
PNKP-203ENST00000593946 KRT32Q14532 448 aa24.81■■□□□ 1.56
PNKP-203ENST00000593946 DOK7Q18PE1 504 aa24.81■■□□□ 1.56
PNKP-203ENST00000593946 DZIP1Q86YF9 867 aaKnown RBP24.81■■□□□ 1.56
PNKP-203ENST00000593946 SUPT20HQ8NEM7 779 aa24.81■■□□□ 1.56
PNKP-203ENST00000593946 RIOK1Q9BRS2 568 aaKnown RBP24.81■■□□□ 1.56
PNKP-203ENST00000593946 ZSWIM6Q9HCJ5 1215 aa24.81■■□□□ 1.56
PNKP-203ENST00000593946 ZMYM6O95789 1325 aa24.8■■□□□ 1.56
PNKP-203ENST00000593946 FER1L6Q2WGJ9 1857 aa24.8■■□□□ 1.56
PNKP-203ENST00000593946 MAGEB6P1A0A0J9YX57 407 aa24.8■■□□□ 1.56
PNKP-203ENST00000593946 K7ELQ4 463 aaPredicted RBP24.8■■□□□ 1.56
PNKP-203ENST00000593946 ALX1Q15699 326 aa24.8■■□□□ 1.56
PNKP-203ENST00000593946 GRIK5Q16478 980 aa24.8■■□□□ 1.56
PNKP-203ENST00000593946 RTKN2Q8IZC4 609 aa24.8■■□□□ 1.56
PNKP-203ENST00000593946 PSME4Q14997 1843 aa24.8■■□□□ 1.56
PNKP-203ENST00000593946 PATL2C9JE40 543 aaKnown RBP24.79■■□□□ 1.56
PNKP-203ENST00000593946 PSMA5P28066 241 aa24.79■■□□□ 1.56
PNKP-203ENST00000593946 GTF2IP78347 998 aa24.79■■□□□ 1.56
PNKP-203ENST00000593946 MFSD14BQ5SR56 506 aa24.79■■□□□ 1.56
PNKP-203ENST00000593946 TTLL5Q6EMB2 1281 aa24.79■■□□□ 1.56
PNKP-203ENST00000593946 PODNQ7Z5L7 613 aa24.79■■□□□ 1.56
PNKP-203ENST00000593946 PSMD1Q99460 953 aa24.79■■□□□ 1.56
PNKP-203ENST00000593946 KIAA2012Q0VF49 1180 aa24.78■■□□□ 1.56
PNKP-203ENST00000593946 ILDR2Q71H61 639 aa24.78■■□□□ 1.56
PNKP-203ENST00000593946 TTC14Q96N46 770 aa24.78■■□□□ 1.56
PNKP-203ENST00000593946 BAZ2AQ9UIF9 1905 aaKnown RBP24.78■■□□□ 1.56
PNKP-203ENST00000593946 GSG1L2A8MUP6 293 aa24.78■■□□□ 1.56
PNKP-203ENST00000593946 G3V3G9 751 aa24.78■■□□□ 1.56
PNKP-203ENST00000593946 DCAF8Q5TAQ9 597 aa24.78■■□□□ 1.56
PNKP-203ENST00000593946 SOGA3Q5TF21 947 aa24.78■■□□□ 1.56
PNKP-203ENST00000593946 EPB41L4AQ9HCS5 686 aaPredicted RBP24.78■■□□□ 1.56
PNKP-203ENST00000593946 PPP1R1BQ9UD71 204 aaPredicted RBP24.78■■□□□ 1.56
PNKP-203ENST00000593946 APPP05067 770 aa24.77■■□□□ 1.56
PNKP-203ENST00000593946 GSTO1P78417 241 aa24.77■■□□□ 1.56
PNKP-203ENST00000593946 IMMTQ16891 758 aaKnown RBP24.77■■□□□ 1.56
PNKP-203ENST00000593946 RUFY3Q7L099 469 aa24.77■■□□□ 1.56
PNKP-203ENST00000593946 DBNDD1Q9H9R9 158 aa24.77■■□□□ 1.56
PNKP-203ENST00000593946 CYP46A1Q9Y6A2 500 aa24.77■■□□□ 1.56
PNKP-203ENST00000593946 CDK5RAP2Q96SN8 1893 aa24.76■■□□□ 1.55
PNKP-203ENST00000593946 MCM2P49736 904 aa24.76■■□□□ 1.55
PNKP-203ENST00000593946 AOC3Q16853 763 aa24.76■■□□□ 1.55
PNKP-203ENST00000593946 DALRD3Q5D0E6 543 aaKnown RBP24.76■■□□□ 1.55
PNKP-203ENST00000593946 STOX1Q6ZVD7 989 aa24.76■■□□□ 1.55
PNKP-203ENST00000593946 SUGT1Q9Y2Z0 365 aa24.76■■□□□ 1.55
PNKP-203ENST00000593946 SLC4A4Q9Y6R1 1079 aa24.76■■□□□ 1.55
PNKP-203ENST00000593946 ARFGEF1Q9Y6D6 1849 aa24.76■■□□□ 1.55
PNKP-203ENST00000593946 PRKAB2O43741 272 aa24.75■■□□□ 1.55
PNKP-203ENST00000593946 CPA1P15085 419 aa24.75■■□□□ 1.55
PNKP-203ENST00000593946 DYNLL1P63167 89 aaKnown RBP24.75■■□□□ 1.55
PNKP-203ENST00000593946 IFNL3Q8IZI9 196 aa24.75■■□□□ 1.55
PNKP-203ENST00000593946 ECE2O60344 883 aa24.75■■□□□ 1.55
PNKP-203ENST00000593946 COL9A3Q14050 684 aaPredicted RBP24.75■■□□□ 1.55
PNKP-203ENST00000593946 BLOC1S2Q6QNY1 142 aa24.75■■□□□ 1.55
PNKP-203ENST00000593946 TIAM2Q8IVF5 1701 aa24.74■■□□□ 1.55
PNKP-203ENST00000593946 DIXDC1Q155Q3 683 aa24.74■■□□□ 1.55
PNKP-203ENST00000593946 NEK1Q96PY6 1258 aa24.74■■□□□ 1.55
PNKP-203ENST00000593946 AATFQ9NY61 560 aaKnown RBP eCLIP24.74■■□□□ 1.55
PNKP-203ENST00000593946 E7EWF7 191 aa24.73■■□□□ 1.55
PNKP-203ENST00000593946 PPIP5K2O43314 1243 aa24.73■■□□□ 1.55
PNKP-203ENST00000593946 KLHL34Q8N239 644 aa24.73■■□□□ 1.55
PNKP-203ENST00000593946 CERS5Q8N5B7 392 aa24.73■■□□□ 1.55
PNKP-203ENST00000593946 NACAP1Q9BZK3 213 aa24.73■■□□□ 1.55
PNKP-203ENST00000593946 NAPBQ9H115 298 aa24.73■■□□□ 1.55
PNKP-203ENST00000593946 SPON1Q9HCB6 807 aa24.73■■□□□ 1.55
PNKP-203ENST00000593946 MROH7-TTC4A0A0A0MT08 1334 aa24.73■■□□□ 1.55
PNKP-203ENST00000593946 ZNF213O14771 459 aa24.72■■□□□ 1.55
PNKP-203ENST00000593946 LDHCP07864 332 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms