RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 CAP1Q01518 475 aa16.58■□□□□ 0.24
H3F3B-213ENST00000593254 UBE4AQ14139 1066 aa16.58■□□□□ 0.24
H3F3B-213ENST00000593254 CD99L2Q8TCZ2 262 aa16.58■□□□□ 0.24
H3F3B-213ENST00000593254 RIPOR2Q9Y4F9 1068 aa16.58■□□□□ 0.24
H3F3B-213ENST00000593254 MROH5Q6ZUA9 1318 aa16.57■□□□□ 0.24
H3F3B-213ENST00000593254 CRHR2Q13324 411 aa16.57■□□□□ 0.24
H3F3B-213ENST00000593254 CERS5Q8N5B7 392 aa16.57■□□□□ 0.24
H3F3B-213ENST00000593254 MTMR14Q8NCE2 650 aa16.57■□□□□ 0.24
H3F3B-213ENST00000593254 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
H3F3B-213ENST00000593254 GJA5P36382 358 aa16.56■□□□□ 0.24
H3F3B-213ENST00000593254 RARSP54136 660 aaKnown RBP16.56■□□□□ 0.24
H3F3B-213ENST00000593254 EFCC1Q9HA90 598 aa16.56■□□□□ 0.24
H3F3B-213ENST00000593254 NOB1Q9ULX3 412 aaKnown RBP16.56■□□□□ 0.24
H3F3B-213ENST00000593254 PPP2R3BQ9Y5P8 575 aa16.56■□□□□ 0.24
H3F3B-213ENST00000593254 LAMA3Q16787 3333 aa16.55■□□□□ 0.24
H3F3B-213ENST00000593254 COL6A3P12111 3177 aa16.55■□□□□ 0.24
H3F3B-213ENST00000593254 TESPA1A2RU30 521 aaPredicted RBP16.55■□□□□ 0.24
H3F3B-213ENST00000593254 PPP1R12BO60237 982 aaPredicted RBP16.55■□□□□ 0.24
H3F3B-213ENST00000593254 FKBP1AP62942 108 aaKnown RBP16.55■□□□□ 0.24
H3F3B-213ENST00000593254 LRRC24Q50LG9 513 aa16.55■□□□□ 0.24
H3F3B-213ENST00000593254 ZNF333Q96JL9 665 aa16.55■□□□□ 0.24
H3F3B-213ENST00000593254 PTPN18Q99952 460 aa16.55■□□□□ 0.24
H3F3B-213ENST00000593254 COLQQ9Y215 455 aaPredicted RBP16.55■□□□□ 0.24
H3F3B-213ENST00000593254 OTOFQ9HC10 1997 aa16.55■□□□□ 0.24
H3F3B-213ENST00000593254 SP3Q02447 781 aa16.54■□□□□ 0.24
H3F3B-213ENST00000593254 DLGAP5Q15398 846 aa16.54■□□□□ 0.24
H3F3B-213ENST00000593254 OTUD7BQ6GQQ9 843 aa16.54■□□□□ 0.24
H3F3B-213ENST00000593254 MIER1Q8N108 512 aa16.54■□□□□ 0.24
H3F3B-213ENST00000593254 VGLL2Q8N8G2 317 aa16.54■□□□□ 0.24
H3F3B-213ENST00000593254 TDRD7Q8NHU6 1098 aaKnown RBP16.54■□□□□ 0.24
H3F3B-213ENST00000593254 FAM84BQ96KN1 310 aaPredicted RBP16.54■□□□□ 0.24
H3F3B-213ENST00000593254 API5Q9BZZ5 524 aaKnown RBP16.54■□□□□ 0.24
H3F3B-213ENST00000593254 FAM205AQ6ZU69 1335 aa16.53■□□□□ 0.24
H3F3B-213ENST00000593254 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
H3F3B-213ENST00000593254 HIBADHP31937 336 aaKnown RBP16.53■□□□□ 0.24
H3F3B-213ENST00000593254 GYG1P46976 350 aa16.53■□□□□ 0.24
H3F3B-213ENST00000593254 DIEXFQ68CQ4 756 aaKnown RBP16.53■□□□□ 0.24
H3F3B-213ENST00000593254 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
H3F3B-213ENST00000593254 PCDHAC2Q9Y5I4 1007 aa16.53■□□□□ 0.24
H3F3B-213ENST00000593254 USP2O75604 605 aaPredicted RBP16.52■□□□□ 0.24
H3F3B-213ENST00000593254 PDE8BO95263 885 aa16.52■□□□□ 0.24
H3F3B-213ENST00000593254 UBTFL1P0CB47 393 aaPredicted RBP16.52■□□□□ 0.24
H3F3B-213ENST00000593254 RFX5P48382 616 aaPredicted RBP16.52■□□□□ 0.24
H3F3B-213ENST00000593254 SUPT20HL1Q3ZLR7 823 aa16.52■□□□□ 0.24
H3F3B-213ENST00000593254 METTL24Q5JXM2 366 aa16.52■□□□□ 0.24
H3F3B-213ENST00000593254 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
H3F3B-213ENST00000593254 ARHGAP45Q92619 1136 aa16.52■□□□□ 0.24
H3F3B-213ENST00000593254 TMEM106CQ9BVX2 250 aa16.52■□□□□ 0.24
H3F3B-213ENST00000593254 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.52■□□□□ 0.24
H3F3B-213ENST00000593254 JAG2Q9Y219 1238 aa16.52■□□□□ 0.24
H3F3B-213ENST00000593254 MYH13Q9UKX3 1938 aa16.51■□□□□ 0.23
H3F3B-213ENST00000593254 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
H3F3B-213ENST00000593254 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
H3F3B-213ENST00000593254 IREB2P48200 963 aaKnown RBP16.51■□□□□ 0.23
H3F3B-213ENST00000593254 AOX1Q06278 1338 aa16.5■□□□□ 0.23
H3F3B-213ENST00000593254 F8W031 263 aaPredicted RBP16.5■□□□□ 0.23
H3F3B-213ENST00000593254 FBXO33Q7Z6M2 555 aa16.5■□□□□ 0.23
H3F3B-213ENST00000593254 ANKRD13AQ8IZ07 590 aa16.5■□□□□ 0.23
H3F3B-213ENST00000593254 OTUD5Q96G74 571 aa16.5■□□□□ 0.23
H3F3B-213ENST00000593254 MS4A4AQ96JQ5 239 aa16.5■□□□□ 0.23
H3F3B-213ENST00000593254 PRMT6Q96LA8 375 aaPredicted RBP16.5■□□□□ 0.23
H3F3B-213ENST00000593254 CUL9Q8IWT3 2517 aa16.5■□□□□ 0.23
H3F3B-213ENST00000593254 CLRN2A0PK11 232 aa16.49■□□□□ 0.23
H3F3B-213ENST00000593254 EYA2O00167 538 aa16.49■□□□□ 0.23
H3F3B-213ENST00000593254 CFAP100Q494V2 611 aa16.49■□□□□ 0.23
H3F3B-213ENST00000593254 MFSD14BQ5SR56 506 aa16.49■□□□□ 0.23
H3F3B-213ENST00000593254 PTCH2Q9Y6C5 1203 aa16.49■□□□□ 0.23
H3F3B-213ENST00000593254 MYO1BO43795 1136 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 FGFR2P21802 821 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 PUM3Q15397 648 aaKnown RBP16.48■□□□□ 0.23
H3F3B-213ENST00000593254 SLC9C1Q4G0N8 1177 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 CAVIN4Q5BKX8 364 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 NBPF11Q86T75 865 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 VPS37DQ86XT2 251 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 MEIS3Q99687 375 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
H3F3B-213ENST00000593254 LRRFIP2Q9Y608 721 aaKnown RBP16.48■□□□□ 0.23
H3F3B-213ENST00000593254 H0YGN5 161 aa16.47■□□□□ 0.23
H3F3B-213ENST00000593254 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.23
H3F3B-213ENST00000593254 RASA3Q14644 834 aa16.47■□□□□ 0.23
H3F3B-213ENST00000593254 ATG9AQ7Z3C6 839 aa16.47■□□□□ 0.23
H3F3B-213ENST00000593254 VEZTQ9HBM0 779 aa16.47■□□□□ 0.23
H3F3B-213ENST00000593254 BCAR3O75815 825 aa16.46■□□□□ 0.23
H3F3B-213ENST00000593254 IFIT1P09914 478 aaKnown RBP16.46■□□□□ 0.23
H3F3B-213ENST00000593254 TRIM27P14373 513 aa16.46■□□□□ 0.23
H3F3B-213ENST00000593254 ARHGEF6Q15052 776 aa16.46■□□□□ 0.23
H3F3B-213ENST00000593254 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
H3F3B-213ENST00000593254 ELP3Q9H9T3 547 aa16.46■□□□□ 0.23
H3F3B-213ENST00000593254 SERPINA10Q9UK55 444 aa16.46■□□□□ 0.23
H3F3B-213ENST00000593254 TTF2Q9UNY4 1162 aaKnown RBP16.46■□□□□ 0.23
H3F3B-213ENST00000593254 IQSEC3Q9UPP2 1182 aaPredicted RBP16.46■□□□□ 0.23
H3F3B-213ENST00000593254 ZSWIM8A7E2V4 1837 aa16.46■□□□□ 0.23
H3F3B-213ENST00000593254 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
H3F3B-213ENST00000593254 CIAO1O76071 339 aa16.45■□□□□ 0.22
H3F3B-213ENST00000593254 BCAMP50895 628 aa16.45■□□□□ 0.22
H3F3B-213ENST00000593254 SLC4A8Q2Y0W8 1093 aa16.45■□□□□ 0.22
H3F3B-213ENST00000593254 ATF7IPQ6VMQ6 1270 aa16.45■□□□□ 0.22
H3F3B-213ENST00000593254 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms