RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 TSKSQ9UJT2 592 aa16.25■□□□□ 0.19
VMP1-217ENST00000593168 NDUFB9Q9Y6M9 179 aa16.25■□□□□ 0.19
VMP1-217ENST00000593168 RAD50Q92878 1312 aa16.24■□□□□ 0.19
VMP1-217ENST00000593168 WTIPA6NIX2 430 aaPredicted RBP16.24■□□□□ 0.19
VMP1-217ENST00000593168 CCDC85CA6NKD9 419 aa16.24■□□□□ 0.19
VMP1-217ENST00000593168 SEMA3EO15041 775 aa16.24■□□□□ 0.19
VMP1-217ENST00000593168 GPSM2P81274 684 aa16.24■□□□□ 0.19
VMP1-217ENST00000593168 AOC3Q16853 763 aa16.24■□□□□ 0.19
VMP1-217ENST00000593168 ANTXR1Q9H6X2 564 aa16.24■□□□□ 0.19
VMP1-217ENST00000593168 NSFL1CQ9UNZ2 370 aaKnown RBP16.24■□□□□ 0.19
VMP1-217ENST00000593168 IRS2Q9Y4H2 1338 aa16.23■□□□□ 0.19
VMP1-217ENST00000593168 PPIP5K2O43314 1243 aa16.23■□□□□ 0.19
VMP1-217ENST00000593168 ZFYP08048 801 aaPredicted RBP16.23■□□□□ 0.19
VMP1-217ENST00000593168 HIBADHP31937 336 aaKnown RBP16.23■□□□□ 0.19
VMP1-217ENST00000593168 ANP32AP39687 249 aaKnown RBP16.23■□□□□ 0.19
VMP1-217ENST00000593168 GYG1P46976 350 aa16.23■□□□□ 0.19
VMP1-217ENST00000593168 NMIQ13287 307 aaPredicted RBP16.23■□□□□ 0.19
VMP1-217ENST00000593168 RASGRF1Q13972 1273 aa16.23■□□□□ 0.19
VMP1-217ENST00000593168 SPATA5Q8NB90 893 aa16.23■□□□□ 0.19
VMP1-217ENST00000593168 BEGAINQ9BUH8 593 aa16.23■□□□□ 0.19
VMP1-217ENST00000593168 GPRC5DQ9NZD1 345 aa16.23■□□□□ 0.19
VMP1-217ENST00000593168 LRRC37AA6NMS7 1700 aa16.22■□□□□ 0.19
VMP1-217ENST00000593168 CYP2E1P05181 493 aaPredicted RBP16.22■□□□□ 0.19
VMP1-217ENST00000593168 PI16Q6UXB8 463 aa16.22■□□□□ 0.19
VMP1-217ENST00000593168 VPS37DQ86XT2 251 aa16.22■□□□□ 0.19
VMP1-217ENST00000593168 TMX4Q9H1E5 349 aaPredicted RBP16.22■□□□□ 0.19
VMP1-217ENST00000593168 ADARB2Q9NS39 739 aaKnown RBP16.22■□□□□ 0.19
VMP1-217ENST00000593168 GGA1Q9UJY5 639 aa16.22■□□□□ 0.19
VMP1-217ENST00000593168 CASP8AP2Q9UKL3 1982 aa16.22■□□□□ 0.19
VMP1-217ENST00000593168 RNF113AO15541 343 aaKnown RBP16.21■□□□□ 0.19
VMP1-217ENST00000593168 MAP2K2P36507 400 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 RGS19P49795 217 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 CXCL9Q07325 125 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 ZSCAN25Q6NSZ9 544 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 FAM227BQ96M60 508 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 GLIS2Q9BZE0 524 aaPredicted RBP16.21■□□□□ 0.19
VMP1-217ENST00000593168 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.21■□□□□ 0.19
VMP1-217ENST00000593168 IL25Q9H293 177 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 ANO2Q9NQ90 1003 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 HELLSQ9NRZ9 838 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 DENND2AQ9ULE3 1009 aa16.21■□□□□ 0.19
VMP1-217ENST00000593168 PDS5AQ29RF7 1337 aaKnown RBP16.2■□□□□ 0.18
VMP1-217ENST00000593168 A0A0D9SFI3 127 aa16.2■□□□□ 0.18
VMP1-217ENST00000593168 UFL1O94874 794 aa16.2■□□□□ 0.18
VMP1-217ENST00000593168 CELF2O95319 508 aaKnown RBP16.2■□□□□ 0.18
VMP1-217ENST00000593168 KLRK1P26718 216 aa16.2■□□□□ 0.18
VMP1-217ENST00000593168 GMPSP49915 693 aaPredicted RBP16.2■□□□□ 0.18
VMP1-217ENST00000593168 MLLT1Q03111 559 aaPredicted RBP16.2■□□□□ 0.18
VMP1-217ENST00000593168 ZMYM1Q5SVZ6 1142 aa16.2■□□□□ 0.18
VMP1-217ENST00000593168 SAPCD2Q86UD0 394 aa16.2■□□□□ 0.18
VMP1-217ENST00000593168 TBC1D16Q8TBP0 767 aa16.2■□□□□ 0.18
VMP1-217ENST00000593168 ZNRF3Q9ULT6 936 aa16.2■□□□□ 0.18
VMP1-217ENST00000593168 MCMDC2Q4G0Z9 681 aa16.19■□□□□ 0.18
VMP1-217ENST00000593168 TXNRD3Q86VQ6 643 aa16.19■□□□□ 0.18
VMP1-217ENST00000593168 MPNDQ8N594 471 aa16.19■□□□□ 0.18
VMP1-217ENST00000593168 RTFDC1Q9BY42 306 aaPredicted RBP16.19■□□□□ 0.18
VMP1-217ENST00000593168 LSG1Q9H089 658 aaKnown RBP16.19■□□□□ 0.18
VMP1-217ENST00000593168 VPS33BQ9H267 617 aa16.19■□□□□ 0.18
VMP1-217ENST00000593168 PIH1D3Q9NQM4 214 aaKnown RBP16.19■□□□□ 0.18
VMP1-217ENST00000593168 POLLQ9UGP5 575 aa16.19■□□□□ 0.18
VMP1-217ENST00000593168 PGAP2Q9UHJ9 254 aa16.19■□□□□ 0.18
VMP1-217ENST00000593168 MED23Q9ULK4 1368 aa16.18■□□□□ 0.18
VMP1-217ENST00000593168 IGSF3O75054 1194 aa16.18■□□□□ 0.18
VMP1-217ENST00000593168 HIRAP54198 1017 aaPredicted RBP16.18■□□□□ 0.18
VMP1-217ENST00000593168 UBE3CQ15386 1083 aa16.18■□□□□ 0.18
VMP1-217ENST00000593168 ZNF804AQ7Z570 1209 aa16.18■□□□□ 0.18
VMP1-217ENST00000593168 C6orf229H3BNL8 230 aa16.17■□□□□ 0.18
VMP1-217ENST00000593168 ADD2P35612 726 aa16.17■□□□□ 0.18
VMP1-217ENST00000593168 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
VMP1-217ENST00000593168 WASHC4Q2M389 1173 aa16.17■□□□□ 0.18
VMP1-217ENST00000593168 DPP8Q6V1X1 898 aaPredicted RBP16.17■□□□□ 0.18
VMP1-217ENST00000593168 SUPT20HQ8NEM7 779 aa16.17■□□□□ 0.18
VMP1-217ENST00000593168 TDRD7Q8NHU6 1098 aaKnown RBP16.17■□□□□ 0.18
VMP1-217ENST00000593168 APPBP2Q92624 585 aa16.17■□□□□ 0.18
VMP1-217ENST00000593168 DDRGK1Q96HY6 314 aa16.17■□□□□ 0.18
VMP1-217ENST00000593168 MCOLN1Q9GZU1 580 aa16.17■□□□□ 0.18
VMP1-217ENST00000593168 DUOX1Q9NRD9 1551 aa16.17■□□□□ 0.18
VMP1-217ENST00000593168 SHTN1A0MZ66 631 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
VMP1-217ENST00000593168 IDH1O75874 414 aaKnown RBP16.16■□□□□ 0.18
VMP1-217ENST00000593168 RAD17O75943 681 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 MCCP23508 829 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 SLC9C2Q5TAH2 1124 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 CIAPIN1Q6FI81 312 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 TRPM4Q8TD43 1214 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 HHIPL1Q96JK4 782 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 ZNF408Q9H9D4 720 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 CD209Q9NNX6 404 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 IQSEC3Q9UPP2 1182 aaPredicted RBP16.16■□□□□ 0.18
VMP1-217ENST00000593168 CCDC171Q6TFL3 1326 aa16.16■□□□□ 0.18
VMP1-217ENST00000593168 MYH7P12883 1935 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 CHGBP05060 677 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 IL1R1P14778 569 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 HSPA4P34932 840 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 ANAPC15P60006 121 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
VMP1-217ENST00000593168 TMED8Q6PL24 325 aaPredicted RBP16.15■□□□□ 0.18
VMP1-217ENST00000593168 ZNF589Q86UQ0 364 aaPredicted RBP16.15■□□□□ 0.18
VMP1-217ENST00000593168 MAP4K1Q92918 833 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms