RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 GNAI2P04899 355 aa18.49■□□□□ 0.55
SF3A2-207ENST00000592839 CRKP46108 304 aa18.49■□□□□ 0.55
SF3A2-207ENST00000592839 GRIK5Q16478 980 aa18.49■□□□□ 0.55
SF3A2-207ENST00000592839 HHIPL2Q6UWX4 724 aa18.49■□□□□ 0.55
SF3A2-207ENST00000592839 CFHR5Q9BXR6 569 aa18.49■□□□□ 0.55
SF3A2-207ENST00000592839 TSKSQ9UJT2 592 aa18.49■□□□□ 0.55
SF3A2-207ENST00000592839 TNNQ9UQP3 1299 aa18.49■□□□□ 0.55
SF3A2-207ENST00000592839 JAG2Q9Y219 1238 aa18.49■□□□□ 0.55
SF3A2-207ENST00000592839 F8W031 263 aaPredicted RBP18.48■□□□□ 0.55
SF3A2-207ENST00000592839 SRGAP3O43295 1099 aa18.48■□□□□ 0.55
SF3A2-207ENST00000592839 KIF23Q02241 960 aaPredicted RBP18.48■□□□□ 0.55
SF3A2-207ENST00000592839 ARMC9Q7Z3E5 817 aa18.48■□□□□ 0.55
SF3A2-207ENST00000592839 TMEM57Q8N5G2 664 aa18.48■□□□□ 0.55
SF3A2-207ENST00000592839 TEPSINQ96N21 525 aa18.48■□□□□ 0.55
SF3A2-207ENST00000592839 CSRNP1Q96S65 589 aa18.48■□□□□ 0.55
SF3A2-207ENST00000592839 SCAF8Q9UPN6 1271 aaKnown RBP18.48■□□□□ 0.55
SF3A2-207ENST00000592839 PA2G4Q9UQ80 394 aaKnown RBP18.48■□□□□ 0.55
SF3A2-207ENST00000592839 POLA2Q14181 598 aa18.47■□□□□ 0.55
SF3A2-207ENST00000592839 SUPT20HL1Q3ZLR7 823 aa18.47■□□□□ 0.55
SF3A2-207ENST00000592839 NOM1Q5C9Z4 860 aaKnown RBP18.47■□□□□ 0.55
SF3A2-207ENST00000592839 PRAMEF18Q5VWM3 479 aa18.47■□□□□ 0.55
SF3A2-207ENST00000592839 TEKT1Q969V4 418 aa18.47■□□□□ 0.55
SF3A2-207ENST00000592839 ZNF70Q9UC06 446 aaPredicted RBP18.47■□□□□ 0.55
SF3A2-207ENST00000592839 CASP8AP2Q9UKL3 1982 aa18.46■□□□□ 0.55
SF3A2-207ENST00000592839 CCDC85CA6NKD9 419 aa18.46■□□□□ 0.55
SF3A2-207ENST00000592839 TM4SF4P48230 202 aa18.46■□□□□ 0.55
SF3A2-207ENST00000592839 RASA3Q14644 834 aa18.46■□□□□ 0.55
SF3A2-207ENST00000592839 APOBEC3HQ6NTF7 200 aaKnown RBP18.46■□□□□ 0.55
SF3A2-207ENST00000592839 MOB2Q70IA6 237 aa18.46■□□□□ 0.55
SF3A2-207ENST00000592839 FAM83AQ86UY5 434 aa18.46■□□□□ 0.55
SF3A2-207ENST00000592839 FRAT1Q92837 279 aaPredicted RBP18.46■□□□□ 0.55
SF3A2-207ENST00000592839 SIL1Q9H173 461 aa18.46■□□□□ 0.55
SF3A2-207ENST00000592839 IQSEC3Q9UPP2 1182 aaPredicted RBP18.46■□□□□ 0.55
SF3A2-207ENST00000592839 CLRN2A0PK11 232 aa18.45■□□□□ 0.54
SF3A2-207ENST00000592839 UBE2Q2LH0YL09 131 aa18.45■□□□□ 0.54
SF3A2-207ENST00000592839 ZBTB48P10074 688 aaPredicted RBP18.45■□□□□ 0.54
SF3A2-207ENST00000592839 SSH3Q8TE77 659 aa18.45■□□□□ 0.54
SF3A2-207ENST00000592839 GNL3LQ9NVN8 582 aaKnown RBP18.45■□□□□ 0.54
SF3A2-207ENST00000592839 DENND2AQ9ULE3 1009 aa18.45■□□□□ 0.54
SF3A2-207ENST00000592839 AKAP2Q9Y2D5 859 aa18.45■□□□□ 0.54
SF3A2-207ENST00000592839 PNMA6EA0A0J9YXQ4 647 aa18.44■□□□□ 0.54
SF3A2-207ENST00000592839 ZBTB7BO15156 539 aaPredicted RBP18.44■□□□□ 0.54
SF3A2-207ENST00000592839 PPP1R12BO60237 982 aaPredicted RBP18.44■□□□□ 0.54
SF3A2-207ENST00000592839 CCDC102BQ68D86 513 aa18.44■□□□□ 0.54
SF3A2-207ENST00000592839 TDRD3Q9H7E2 651 aaKnown RBP18.44■□□□□ 0.54
SF3A2-207ENST00000592839 GPR108Q9NPR9 543 aa18.44■□□□□ 0.54
SF3A2-207ENST00000592839 RFX7Q2KHR2 1363 aa18.43■□□□□ 0.54
SF3A2-207ENST00000592839 FRAT2O75474 233 aaPredicted RBP18.43■□□□□ 0.54
SF3A2-207ENST00000592839 PHKA1P46020 1223 aa18.43■□□□□ 0.54
SF3A2-207ENST00000592839 CHAF1AQ13111 956 aaPredicted RBP18.43■□□□□ 0.54
SF3A2-207ENST00000592839 NBPF12Q5TAG4 269 aaPredicted RBP18.43■□□□□ 0.54
SF3A2-207ENST00000592839 CLUAP1Q96AJ1 413 aa18.43■□□□□ 0.54
SF3A2-207ENST00000592839 RNF186Q9NXI6 227 aa18.43■□□□□ 0.54
SF3A2-207ENST00000592839 A0A1B0GUL7 405 aa18.42■□□□□ 0.54
SF3A2-207ENST00000592839 IGSF3O75054 1194 aa18.42■□□□□ 0.54
SF3A2-207ENST00000592839 USP2O75604 605 aaPredicted RBP18.42■□□□□ 0.54
SF3A2-207ENST00000592839 RLBP1P12271 317 aa18.42■□□□□ 0.54
SF3A2-207ENST00000592839 TNNI2P48788 182 aa18.42■□□□□ 0.54
SF3A2-207ENST00000592839 RBM5P52756 815 aaKnown RBP eCLIP18.42■□□□□ 0.54
SF3A2-207ENST00000592839 SPRYD7Q5W111 196 aa18.42■□□□□ 0.54
SF3A2-207ENST00000592839 ZGPATQ8N5A5 531 aaKnown RBP18.42■□□□□ 0.54
SF3A2-207ENST00000592839 VEZTQ9HBM0 779 aa18.42■□□□□ 0.54
SF3A2-207ENST00000592839 ANGEL1Q9UNK9 670 aaKnown RBP18.42■□□□□ 0.54
SF3A2-207ENST00000592839 NOP58Q9Y2X3 529 aaKnown RBP18.42■□□□□ 0.54
SF3A2-207ENST00000592839 GAKO14976 1311 aa18.42■□□□□ 0.54
SF3A2-207ENST00000592839 MYH2Q9UKX2 1941 aa18.41■□□□□ 0.54
SF3A2-207ENST00000592839 ATP8B2P98198 1209 aa18.41■□□□□ 0.54
SF3A2-207ENST00000592839 RASGRF1Q13972 1273 aa18.41■□□□□ 0.54
SF3A2-207ENST00000592839 MVPQ14764 893 aaKnown RBP18.41■□□□□ 0.54
SF3A2-207ENST00000592839 FAM163AQ96GL9 167 aaPredicted RBP18.41■□□□□ 0.54
SF3A2-207ENST00000592839 MCOLN1Q9GZU1 580 aa18.41■□□□□ 0.54
SF3A2-207ENST00000592839 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.41■□□□□ 0.54
SF3A2-207ENST00000592839 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
SF3A2-207ENST00000592839 PRDX5P30044 214 aa18.4■□□□□ 0.54
SF3A2-207ENST00000592839 ADORA1P30542 326 aa18.4■□□□□ 0.54
SF3A2-207ENST00000592839 IREB2P48200 963 aaKnown RBP18.4■□□□□ 0.54
SF3A2-207ENST00000592839 INHBEP58166 350 aa18.4■□□□□ 0.54
SF3A2-207ENST00000592839 SREBF2Q12772 1141 aa18.4■□□□□ 0.54
SF3A2-207ENST00000592839 TFCP2Q12800 502 aa18.4■□□□□ 0.54
SF3A2-207ENST00000592839 FTSJ3Q8IY81 847 aaKnown RBP18.4■□□□□ 0.54
SF3A2-207ENST00000592839 ANKRD13AQ8IZ07 590 aa18.4■□□□□ 0.54
SF3A2-207ENST00000592839 DAGLAQ9Y4D2 1042 aa18.4■□□□□ 0.54
SF3A2-207ENST00000592839 TESPA1A2RU30 521 aaPredicted RBP18.39■□□□□ 0.53
SF3A2-207ENST00000592839 RGS19P49795 217 aa18.39■□□□□ 0.53
SF3A2-207ENST00000592839 MLLT1Q03111 559 aaPredicted RBP18.39■□□□□ 0.53
SF3A2-207ENST00000592839 DGKZQ13574 1117 aa18.39■□□□□ 0.53
SF3A2-207ENST00000592839 TTLL12Q14166 644 aaPredicted RBP18.39■□□□□ 0.53
SF3A2-207ENST00000592839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.39■□□□□ 0.53
SF3A2-207ENST00000592839 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
SF3A2-207ENST00000592839 MAST2Q6P0Q8 1798 aa18.38■□□□□ 0.53
SF3A2-207ENST00000592839 MANSC4A6NHS7 340 aaPredicted RBP18.38■□□□□ 0.53
SF3A2-207ENST00000592839 LDHBP07195 334 aaKnown RBP18.38■□□□□ 0.53
SF3A2-207ENST00000592839 MS4A1P11836 297 aa18.38■□□□□ 0.53
SF3A2-207ENST00000592839 TIMM10P62072 90 aa18.38■□□□□ 0.53
SF3A2-207ENST00000592839 HOOK2Q96ED9 719 aa18.38■□□□□ 0.53
SF3A2-207ENST00000592839 ZNF512BQ96KM6 892 aaPredicted RBP18.38■□□□□ 0.53
SF3A2-207ENST00000592839 TMEM39BQ9GZU3 492 aa18.38■□□□□ 0.53
SF3A2-207ENST00000592839 CDAN1Q8IWY9 1227 aa18.37■□□□□ 0.53
SF3A2-207ENST00000592839 WNK4Q96J92 1243 aa18.37■□□□□ 0.53
SF3A2-207ENST00000592839 IDI2Q9BXS1 227 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms