RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 LDHBP07195 334 aaKnown RBP12.14□□□□□ -0.47
TPM4-216ENST00000592822 CRKP46108 304 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 HDLBPQ00341 1268 aaKnown RBP12.14□□□□□ -0.47
TPM4-216ENST00000592822 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 CFAP100Q494V2 611 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 TSHZ3Q63HK5 1081 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 ZGPATQ8N5A5 531 aaKnown RBP12.14□□□□□ -0.47
TPM4-216ENST00000592822 MTMR14Q8NCE2 650 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 RBM46Q8TBY0 533 aaKnown RBP12.14□□□□□ -0.47
TPM4-216ENST00000592822 PIH1D3Q9NQM4 214 aaKnown RBP12.14□□□□□ -0.47
TPM4-216ENST00000592822 ECHDC1Q9NTX5 307 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
TPM4-216ENST00000592822 SERPINA10Q9UK55 444 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 DOCK2Q92608 1830 aa12.14□□□□□ -0.47
TPM4-216ENST00000592822 AOX1Q06278 1338 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 WNT10BO00744 389 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 MECOMQ03112 1051 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 DLGAP5Q15398 846 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 DIXDC1Q155Q3 683 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 SPTY2D1Q68D10 685 aaPredicted RBP12.13□□□□□ -0.47
TPM4-216ENST00000592822 CHADLQ6NUI6 762 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 ERICH6Q7L0X2 663 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 ZNF384Q8TF68 577 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 ZC3H15Q8WU90 426 aaKnown RBP12.13□□□□□ -0.47
TPM4-216ENST00000592822 PRMT6Q96LA8 375 aaPredicted RBP12.13□□□□□ -0.47
TPM4-216ENST00000592822 HAUS7Q99871 368 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 MRIQ9BWK5 157 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 BOLA2Q9H3K6 86 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 ANTXR1Q9H6X2 564 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 ECM29Q5VYK3 1845 aa12.13□□□□□ -0.47
TPM4-216ENST00000592822 MAST3O60307 1309 aa12.12□□□□□ -0.47
TPM4-216ENST00000592822 MX1P20591 662 aa12.12□□□□□ -0.47
TPM4-216ENST00000592822 RBM5P52756 815 aaKnown RBP eCLIP12.12□□□□□ -0.47
TPM4-216ENST00000592822 MAP1SQ66K74 1059 aaPredicted RBP12.12□□□□□ -0.47
TPM4-216ENST00000592822 HHIPL2Q6UWX4 724 aa12.12□□□□□ -0.47
TPM4-216ENST00000592822 SMC1BQ8NDV3 1235 aa12.12□□□□□ -0.47
TPM4-216ENST00000592822 PI4K2BQ8TCG2 481 aa12.12□□□□□ -0.47
TPM4-216ENST00000592822 TEKT1Q969V4 418 aa12.12□□□□□ -0.47
TPM4-216ENST00000592822 EDC3Q96F86 508 aaKnown RBP12.12□□□□□ -0.47
TPM4-216ENST00000592822 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
TPM4-216ENST00000592822 DNAJC2Q99543 621 aaKnown RBP12.12□□□□□ -0.47
TPM4-216ENST00000592822 LRP2BPQ9P2M1 347 aa12.12□□□□□ -0.47
TPM4-216ENST00000592822 MAST2Q6P0Q8 1798 aa12.12□□□□□ -0.47
TPM4-216ENST00000592822 TTC41PQ6P2S7 1318 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 GOLIM4O00461 696 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 FSTL1Q12841 308 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 ANGEL2Q5VTE6 544 aaKnown RBP12.11□□□□□ -0.47
TPM4-216ENST00000592822 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
TPM4-216ENST00000592822 DZIP1Q86YF9 867 aaKnown RBP12.11□□□□□ -0.47
TPM4-216ENST00000592822 CNTROBQ8N137 903 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 NSUN4Q96CB9 384 aaKnown RBP12.11□□□□□ -0.47
TPM4-216ENST00000592822 ZDHHC15Q96MV8 337 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 PAG1Q9NWQ8 432 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 GGA3Q9NZ52 723 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 RAI14Q9P0K7 980 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 STAP2Q9UGK3 403 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 DAGLAQ9Y4D2 1042 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 GAKO14976 1311 aa12.11□□□□□ -0.47
TPM4-216ENST00000592822 ITGBL1O95965 494 aaPredicted RBP12.1□□□□□ -0.47
TPM4-216ENST00000592822 PDE4AP27815 886 aa12.1□□□□□ -0.47
TPM4-216ENST00000592822 PDE1AP54750 535 aa12.1□□□□□ -0.47
TPM4-216ENST00000592822 ERICH6BQ5W0A0 696 aa12.1□□□□□ -0.47
TPM4-216ENST00000592822 DCPSQ96C86 337 aaKnown RBP12.1□□□□□ -0.47
TPM4-216ENST00000592822 CCDC136Q96JN2 1154 aa12.1□□□□□ -0.47
TPM4-216ENST00000592822 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
TPM4-216ENST00000592822 TDRD3Q9H7E2 651 aaKnown RBP12.1□□□□□ -0.47
TPM4-216ENST00000592822 CLRN2A0PK11 232 aa12.09□□□□□ -0.47
TPM4-216ENST00000592822 ERC2O15083 957 aa12.09□□□□□ -0.47
TPM4-216ENST00000592822 IDH1O75874 414 aaKnown RBP12.09□□□□□ -0.47
TPM4-216ENST00000592822 GLRX3O76003 335 aaKnown RBP12.09□□□□□ -0.47
TPM4-216ENST00000592822 GSTO1P78417 241 aa12.09□□□□□ -0.47
TPM4-216ENST00000592822 TTF1Q15361 905 aaPredicted RBP12.09□□□□□ -0.47
TPM4-216ENST00000592822 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
TPM4-216ENST00000592822 DLK2Q6UY11 383 aa12.09□□□□□ -0.47
TPM4-216ENST00000592822 CENPQQ7L2Z9 268 aaPredicted RBP12.09□□□□□ -0.47
TPM4-216ENST00000592822 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
TPM4-216ENST00000592822 FAM163AQ96GL9 167 aaPredicted RBP12.09□□□□□ -0.47
TPM4-216ENST00000592822 ZNF70Q9UC06 446 aaPredicted RBP12.09□□□□□ -0.47
TPM4-216ENST00000592822 SCAF8Q9UPN6 1271 aaKnown RBP12.09□□□□□ -0.47
TPM4-216ENST00000592822 MYH7P12883 1935 aa12.09□□□□□ -0.47
TPM4-216ENST00000592822 MROH7-TTC4A0A0A0MT08 1334 aa12.09□□□□□ -0.47
TPM4-216ENST00000592822 PITPNM2Q9BZ72 1349 aa12.09□□□□□ -0.47
TPM4-216ENST00000592822 ADM5C9JUS6 153 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 TRAF5O00463 557 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 MYO1BO43795 1136 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 IGSF3O75054 1194 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 MAP4K4O95819 1239 aaPredicted RBP12.08□□□□□ -0.48
TPM4-216ENST00000592822 FMR1Q06787 632 aaKnown RBP eCLIP12.08□□□□□ -0.48
TPM4-216ENST00000592822 MAP3K12Q12852 859 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 NAA16Q6N069 864 aaPredicted RBP12.08□□□□□ -0.48
TPM4-216ENST00000592822 CDC42EP5Q6NZY7 148 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 KRT26Q7Z3Y9 468 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 ADGRA1Q86SQ6 560 aa12.08□□□□□ -0.48
TPM4-216ENST00000592822 USP48Q86UV5 1035 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms