RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 LAMB1P07942 1786 aa23.63■■□□□ 1.37
CCDC43-205ENST00000592333 FRAT2O75474 233 aaPredicted RBP23.62■■□□□ 1.37
CCDC43-205ENST00000592333 TBC1D8O95759 1140 aa23.62■■□□□ 1.37
CCDC43-205ENST00000592333 FGFR2P21802 821 aa23.62■■□□□ 1.37
CCDC43-205ENST00000592333 CRKP46108 304 aa23.62■■□□□ 1.37
CCDC43-205ENST00000592333 TNNI2P48788 182 aa23.62■■□□□ 1.37
CCDC43-205ENST00000592333 NBPF12Q5TAG4 269 aaPredicted RBP23.62■■□□□ 1.37
CCDC43-205ENST00000592333 MAST3O60307 1309 aa23.61■■□□□ 1.37
CCDC43-205ENST00000592333 EYA2O00167 538 aa23.61■■□□□ 1.37
CCDC43-205ENST00000592333 USP2O75604 605 aaPredicted RBP23.61■■□□□ 1.37
CCDC43-205ENST00000592333 WNK4Q96J92 1243 aa23.61■■□□□ 1.37
CCDC43-205ENST00000592333 RFX5P48382 616 aaPredicted RBP23.6■■□□□ 1.37
CCDC43-205ENST00000592333 LPIN2Q92539 896 aa23.6■■□□□ 1.37
CCDC43-205ENST00000592333 CDCA7LQ96GN5 454 aa23.6■■□□□ 1.37
CCDC43-205ENST00000592333 TDRD3Q9H7E2 651 aaKnown RBP23.6■■□□□ 1.37
CCDC43-205ENST00000592333 MKRN3Q13064 507 aaKnown RBP23.59■■□□□ 1.37
CCDC43-205ENST00000592333 OTUD7BQ6GQQ9 843 aa23.59■■□□□ 1.37
CCDC43-205ENST00000592333 IFNL1Q8IU54 200 aa23.59■■□□□ 1.37
CCDC43-205ENST00000592333 TEKT1Q969V4 418 aa23.59■■□□□ 1.37
CCDC43-205ENST00000592333 API5Q9BZZ5 524 aaKnown RBP23.59■■□□□ 1.37
CCDC43-205ENST00000592333 AOX1Q06278 1338 aa23.59■■□□□ 1.37
CCDC43-205ENST00000592333 ZBTB22O15209 634 aa23.58■■□□□ 1.37
CCDC43-205ENST00000592333 FKTNO75072 461 aa23.58■■□□□ 1.37
CCDC43-205ENST00000592333 CIAO1O76071 339 aa23.58■■□□□ 1.37
CCDC43-205ENST00000592333 FKBP1CQ5VVH2 108 aa23.58■■□□□ 1.37
CCDC43-205ENST00000592333 ZDHHC15Q96MV8 337 aa23.58■■□□□ 1.37
CCDC43-205ENST00000592333 TEPSINQ96N21 525 aa23.58■■□□□ 1.37
CCDC43-205ENST00000592333 UBTFL1P0CB47 393 aaPredicted RBP23.57■■□□□ 1.36
CCDC43-205ENST00000592333 SLC5A1P13866 664 aa23.57■■□□□ 1.36
CCDC43-205ENST00000592333 BCAMP50895 628 aa23.57■■□□□ 1.36
CCDC43-205ENST00000592333 HHIPL2Q6UWX4 724 aa23.57■■□□□ 1.36
CCDC43-205ENST00000592333 KLHDC4Q8TBB5 520 aa23.57■■□□□ 1.36
CCDC43-205ENST00000592333 ARHGAP45Q92619 1136 aa23.57■■□□□ 1.36
CCDC43-205ENST00000592333 HOOK2Q96ED9 719 aa23.57■■□□□ 1.36
CCDC43-205ENST00000592333 CLMNQ96JQ2 1002 aa23.57■■□□□ 1.36
CCDC43-205ENST00000592333 FZD1Q9UP38 647 aa23.57■■□□□ 1.36
CCDC43-205ENST00000592333 TESPA1A2RU30 521 aaPredicted RBP23.56■■□□□ 1.36
CCDC43-205ENST00000592333 FAM83AQ86UY5 434 aa23.56■■□□□ 1.36
CCDC43-205ENST00000592333 WDR66Q8TBY9 1149 aa23.56■■□□□ 1.36
CCDC43-205ENST00000592333 CHAF1AQ13111 956 aaPredicted RBP23.55■■□□□ 1.36
CCDC43-205ENST00000592333 FBXO46Q6PJ61 603 aaPredicted RBP23.55■■□□□ 1.36
CCDC43-205ENST00000592333 TMOD2Q9NZR1 351 aa23.55■■□□□ 1.36
CCDC43-205ENST00000592333 IQSEC3Q9UPP2 1182 aaPredicted RBP23.55■■□□□ 1.36
CCDC43-205ENST00000592333 ATG9AQ7Z3C6 839 aa23.54■■□□□ 1.36
CCDC43-205ENST00000592333 NOB1Q9ULX3 412 aaKnown RBP23.54■■□□□ 1.36
CCDC43-205ENST00000592333 HPS5Q9UPZ3 1129 aa23.54■■□□□ 1.36
CCDC43-205ENST00000592333 TCP10L2B9ZVM9 353 aa23.53■■□□□ 1.36
CCDC43-205ENST00000592333 CEP126Q9P2H0 1117 aa23.53■■□□□ 1.36
CCDC43-205ENST00000592333 MAP3K9P80192 1104 aa23.52■■□□□ 1.36
CCDC43-205ENST00000592333 GRIK5Q16478 980 aa23.52■■□□□ 1.36
CCDC43-205ENST00000592333 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.52■■□□□ 1.36
CCDC43-205ENST00000592333 TMEM39BQ9GZU3 492 aa23.52■■□□□ 1.36
CCDC43-205ENST00000592333 GNL3LQ9NVN8 582 aaKnown RBP23.52■■□□□ 1.36
CCDC43-205ENST00000592333 IGF2BP3O00425 579 aaKnown RBP eCLIP23.51■■□□□ 1.35
CCDC43-205ENST00000592333 SEMA3EO15041 775 aa23.51■■□□□ 1.35
CCDC43-205ENST00000592333 IL15P40933 162 aaPredicted RBP23.51■■□□□ 1.35
CCDC43-205ENST00000592333 APOBEC3HQ6NTF7 200 aaKnown RBP23.51■■□□□ 1.35
CCDC43-205ENST00000592333 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.51■■□□□ 1.35
CCDC43-205ENST00000592333 CSADQ9Y600 493 aa23.51■■□□□ 1.35
CCDC43-205ENST00000592333 RPAP1Q9BWH6 1393 aaPredicted RBP23.51■■□□□ 1.35
CCDC43-205ENST00000592333 RARSP54136 660 aaKnown RBP23.5■■□□□ 1.35
CCDC43-205ENST00000592333 INTS3Q68E01 1043 aaKnown RBP23.5■■□□□ 1.35
CCDC43-205ENST00000592333 OPTNQ96CV9 577 aa23.5■■□□□ 1.35
CCDC43-205ENST00000592333 R3HDMLQ9H3Y0 253 aa23.5■■□□□ 1.35
CCDC43-205ENST00000592333 COPRSQ9NQ92 184 aa23.5■■□□□ 1.35
CCDC43-205ENST00000592333 GJA5P36382 358 aa23.49■■□□□ 1.35
CCDC43-205ENST00000592333 GTF2A2P52657 109 aa23.49■■□□□ 1.35
CCDC43-205ENST00000592333 MS4A4AQ96JQ5 239 aa23.49■■□□□ 1.35
CCDC43-205ENST00000592333 SALL1Q9NSC2 1324 aa23.49■■□□□ 1.35
CCDC43-205ENST00000592333 GNAI3P08754 354 aa23.48■■□□□ 1.35
CCDC43-205ENST00000592333 ATP2B3Q16720 1220 aa23.48■■□□□ 1.35
CCDC43-205ENST00000592333 ERO1AQ96HE7 468 aa23.48■■□□□ 1.35
CCDC43-205ENST00000592333 ELP3Q9H9T3 547 aa23.48■■□□□ 1.35
CCDC43-205ENST00000592333 OTOFQ9HC10 1997 aa23.47■■□□□ 1.35
CCDC43-205ENST00000592333 VGLL4Q14135 290 aa23.47■■□□□ 1.35
CCDC43-205ENST00000592333 DCAF15Q66K64 600 aa23.47■■□□□ 1.35
CCDC43-205ENST00000592333 PTPN18Q99952 460 aa23.47■■□□□ 1.35
CCDC43-205ENST00000592333 ZCCHC17Q9NP64 241 aaKnown RBP23.47■■□□□ 1.35
CCDC43-205ENST00000592333 DENND2AQ9ULE3 1009 aa23.47■■□□□ 1.35
CCDC43-205ENST00000592333 LRRFIP2Q9Y608 721 aaKnown RBP23.47■■□□□ 1.35
CCDC43-205ENST00000592333 IPO8O15397 1037 aaKnown RBP23.46■■□□□ 1.35
CCDC43-205ENST00000592333 MYH13Q9UKX3 1938 aa23.45■■□□□ 1.35
CCDC43-205ENST00000592333 PDS5AQ29RF7 1337 aaKnown RBP23.45■■□□□ 1.34
CCDC43-205ENST00000592333 SPDYE5A6NIY4 337 aa23.45■■□□□ 1.34
CCDC43-205ENST00000592333 SOX10P56693 466 aa23.45■■□□□ 1.34
CCDC43-205ENST00000592333 CRHR2Q13324 411 aa23.45■■□□□ 1.34
CCDC43-205ENST00000592333 MTX1Q13505 466 aa23.45■■□□□ 1.34
CCDC43-205ENST00000592333 ERO1BQ86YB8 467 aa23.45■■□□□ 1.34
CCDC43-205ENST00000592333 CDAN1Q8IWY9 1227 aa23.45■■□□□ 1.34
CCDC43-205ENST00000592333 ZGPATQ8N5A5 531 aaKnown RBP23.45■■□□□ 1.34
CCDC43-205ENST00000592333 FAM151AQ8WW52 585 aa23.45■■□□□ 1.34
CCDC43-205ENST00000592333 SIL1Q9H173 461 aa23.45■■□□□ 1.34
CCDC43-205ENST00000592333 ARHGEF6Q15052 776 aa23.44■■□□□ 1.34
CCDC43-205ENST00000592333 WDHD1O75717 1129 aaPredicted RBP23.43■■□□□ 1.34
CCDC43-205ENST00000592333 LDHBP07195 334 aaKnown RBP23.43■■□□□ 1.34
CCDC43-205ENST00000592333 CACNB3P54284 484 aa23.43■■□□□ 1.34
CCDC43-205ENST00000592333 SP3Q02447 781 aa23.43■■□□□ 1.34
CCDC43-205ENST00000592333 OTOP1Q7RTM1 612 aa23.43■■□□□ 1.34
CCDC43-205ENST00000592333 MEIS3Q99687 375 aa23.43■■□□□ 1.34
CCDC43-205ENST00000592333 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms