RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 TMEM39BQ9GZU3 492 aa11.61□□□□□ -0.55
APOC1-207ENST00000592176 C9orf78Q9NZ63 289 aaPredicted RBP11.61□□□□□ -0.55
APOC1-207ENST00000592176 PTCH2Q9Y6C5 1203 aa11.61□□□□□ -0.55
APOC1-207ENST00000592176 GRM8O00222 908 aa11.6□□□□□ -0.55
APOC1-207ENST00000592176 CRKP46108 304 aa11.6□□□□□ -0.55
APOC1-207ENST00000592176 VGLL4Q14135 290 aa11.6□□□□□ -0.55
APOC1-207ENST00000592176 KIF22Q14807 665 aa11.6□□□□□ -0.55
APOC1-207ENST00000592176 NCBP3Q53F19 620 aaKnown RBP11.6□□□□□ -0.55
APOC1-207ENST00000592176 CDAN1Q8IWY9 1227 aa11.6□□□□□ -0.55
APOC1-207ENST00000592176 FAM43AQ8N2R8 423 aa11.6□□□□□ -0.55
APOC1-207ENST00000592176 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
APOC1-207ENST00000592176 ZNF646O15015 1829 aaPredicted RBP11.59□□□□□ -0.55
APOC1-207ENST00000592176 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
APOC1-207ENST00000592176 FXR1P51114 621 aaKnown RBP eCLIP11.59□□□□□ -0.55
APOC1-207ENST00000592176 EXOSC9Q06265 439 aaKnown RBP11.59□□□□□ -0.55
APOC1-207ENST00000592176 CCDC184Q52MB2 194 aa11.59□□□□□ -0.55
APOC1-207ENST00000592176 VPS37DQ86XT2 251 aa11.59□□□□□ -0.55
APOC1-207ENST00000592176 WDR63Q8IWG1 891 aa11.59□□□□□ -0.55
APOC1-207ENST00000592176 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.59□□□□□ -0.554e-15■■■□□ 17.6
APOC1-207ENST00000592176 COLQQ9Y215 455 aaPredicted RBP11.59□□□□□ -0.55
APOC1-207ENST00000592176 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
APOC1-207ENST00000592176 SPEF2Q9C093 1822 aa11.58□□□□□ -0.56
APOC1-207ENST00000592176 TLR2O60603 784 aa11.58□□□□□ -0.56
APOC1-207ENST00000592176 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.56
APOC1-207ENST00000592176 CETPP11597 493 aa11.58□□□□□ -0.56
APOC1-207ENST00000592176 HDLBPQ00341 1268 aaKnown RBP11.58□□□□□ -0.56
APOC1-207ENST00000592176 FBXO33Q7Z6M2 555 aa11.58□□□□□ -0.56
APOC1-207ENST00000592176 PUS3Q9BZE2 481 aaKnown RBP11.58□□□□□ -0.56
APOC1-207ENST00000592176 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
APOC1-207ENST00000592176 FANCIQ9NVI1 1328 aa11.58□□□□□ -0.56
APOC1-207ENST00000592176 MYH3P11055 1940 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 SPDYE5A6NIY4 337 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 ALDH1L1O75891 902 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 GNRH1P01148 92 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 CHAF1AQ13111 956 aaPredicted RBP11.57□□□□□ -0.56
APOC1-207ENST00000592176 SNAPC2Q13487 334 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 GRIK5Q16478 980 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 CAVIN4Q5BKX8 364 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 SLC4A10Q6U841 1118 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 ERO1BQ86YB8 467 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 SH3TC2Q8TF17 1288 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 TBC1D22AQ8WUA7 517 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 ZKSCAN4Q969J2 545 aaPredicted RBP11.57□□□□□ -0.56
APOC1-207ENST00000592176 HOOK2Q96ED9 719 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 MRIQ9BWK5 157 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 SRCIN1Q9C0H9 1055 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 ZCCHC17Q9NP64 241 aaKnown RBP11.57□□□□□ -0.56
APOC1-207ENST00000592176 IQSEC3Q9UPP2 1182 aaPredicted RBP11.57□□□□□ -0.56
APOC1-207ENST00000592176 MROH5Q6ZUA9 1318 aa11.57□□□□□ -0.56
APOC1-207ENST00000592176 BTBD19C9JJ37 291 aa11.56□□□□□ -0.56
APOC1-207ENST00000592176 H0YGN5 161 aa11.56□□□□□ -0.56
APOC1-207ENST00000592176 IRF6O14896 467 aa11.56□□□□□ -0.56
APOC1-207ENST00000592176 CACNB3P54284 484 aa11.56□□□□□ -0.56
APOC1-207ENST00000592176 PRMT2P55345 433 aa11.56□□□□□ -0.56
APOC1-207ENST00000592176 LACTBP83111 547 aaPredicted RBP11.56□□□□□ -0.56
APOC1-207ENST00000592176 TEKT1Q969V4 418 aa11.56□□□□□ -0.56
APOC1-207ENST00000592176 WRNIP1Q96S55 665 aa11.56□□□□□ -0.56
APOC1-207ENST00000592176 TMOD2Q9NZR1 351 aa11.56□□□□□ -0.56
APOC1-207ENST00000592176 HOXD10P28358 340 aa11.55□□□□□ -0.56
APOC1-207ENST00000592176 METTL24Q5JXM2 366 aa11.55□□□□□ -0.56
APOC1-207ENST00000592176 FKBP1CQ5VVH2 108 aa11.55□□□□□ -0.56
APOC1-207ENST00000592176 FAM83AQ86UY5 434 aa11.55□□□□□ -0.56
APOC1-207ENST00000592176 DPF3Q92784 378 aa11.55□□□□□ -0.56
APOC1-207ENST00000592176 SUCLG2Q96I99 432 aa11.55□□□□□ -0.56
APOC1-207ENST00000592176 ZDHHC15Q96MV8 337 aa11.55□□□□□ -0.56
APOC1-207ENST00000592176 ARHGAP39Q9C0H5 1083 aa11.55□□□□□ -0.56
APOC1-207ENST00000592176 SNCAIPQ9Y6H5 919 aa11.55□□□□□ -0.56
APOC1-207ENST00000592176 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
APOC1-207ENST00000592176 PSMC4P43686 418 aa11.54□□□□□ -0.56
APOC1-207ENST00000592176 BCAMP50895 628 aa11.54□□□□□ -0.56
APOC1-207ENST00000592176 PPATQ06203 517 aa11.54□□□□□ -0.56
APOC1-207ENST00000592176 PPIL2Q13356 520 aa11.54□□□□□ -0.56
APOC1-207ENST00000592176 LRRC24Q50LG9 513 aa11.54□□□□□ -0.56
APOC1-207ENST00000592176 DCAF15Q66K64 600 aa11.54□□□□□ -0.56
APOC1-207ENST00000592176 APOBEC3HQ6NTF7 200 aaKnown RBP11.54□□□□□ -0.56
APOC1-207ENST00000592176 C17orf99Q6UX52 265 aa11.54□□□□□ -0.56
APOC1-207ENST00000592176 KAZALD1Q96I82 304 aa11.54□□□□□ -0.56
APOC1-207ENST00000592176 PDE8BO95263 885 aa11.53□□□□□ -0.56
APOC1-207ENST00000592176 FMNL1O95466 1100 aaPredicted RBP11.53□□□□□ -0.56
APOC1-207ENST00000592176 NBPF7P0C2Y1 421 aaPredicted RBP11.53□□□□□ -0.56
APOC1-207ENST00000592176 HHIPL2Q6UWX4 724 aa11.53□□□□□ -0.56
APOC1-207ENST00000592176 MIGA2Q7L4E1 593 aa11.53□□□□□ -0.56
APOC1-207ENST00000592176 ZNF341Q9BYN7 854 aa11.53□□□□□ -0.56
APOC1-207ENST00000592176 SRRDQ9UH36 339 aa11.53□□□□□ -0.56
APOC1-207ENST00000592176 CPA4Q9UI42 421 aa11.53□□□□□ -0.56
APOC1-207ENST00000592176 SUGT1Q9Y2Z0 365 aa11.53□□□□□ -0.56
APOC1-207ENST00000592176 HTTP42858 3142 aa11.53□□□□□ -0.56
APOC1-207ENST00000592176 PDHXO00330 501 aa11.52□□□□□ -0.57
APOC1-207ENST00000592176 MTFR1Q15390 333 aa11.52□□□□□ -0.57
APOC1-207ENST00000592176 ANKRD23Q86SG2 305 aa11.52□□□□□ -0.57
APOC1-207ENST00000592176 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.52□□□□□ -0.57
APOC1-207ENST00000592176 NKX2-3Q8TAU0 364 aa11.52□□□□□ -0.57
APOC1-207ENST00000592176 RAET1EQ8TD07 263 aa11.52□□□□□ -0.57
APOC1-207ENST00000592176 FAM151AQ8WW52 585 aa11.52□□□□□ -0.57
APOC1-207ENST00000592176 BICC1Q9H694 974 aaKnown RBP11.52□□□□□ -0.57
APOC1-207ENST00000592176 MRS2Q9HD23 443 aa11.52□□□□□ -0.57
APOC1-207ENST00000592176 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
APOC1-207ENST00000592176 MAST3O60307 1309 aa11.52□□□□□ -0.57
APOC1-207ENST00000592176 IFIT1P09914 478 aaKnown RBP11.51□□□□□ -0.57
APOC1-207ENST00000592176 OSBPP22059 807 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms