RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 TFCP2Q12800 502 aa18.84■□□□□ 0.61
ERCC1-213ENST00000592023 RASAL3Q86YV0 1011 aa18.84■□□□□ 0.61
ERCC1-213ENST00000592023 CCDC102AQ96A19 550 aa18.84■□□□□ 0.61
ERCC1-213ENST00000592023 TDRD3Q9H7E2 651 aaKnown RBP18.84■□□□□ 0.61
ERCC1-213ENST00000592023 TSKSQ9UJT2 592 aa18.84■□□□□ 0.61
ERCC1-213ENST00000592023 PPP2R3BQ9Y5P8 575 aa18.84■□□□□ 0.61
ERCC1-213ENST00000592023 SPDYE2Q495Y8 402 aa18.83■□□□□ 0.6
ERCC1-213ENST00000592023 TNS4Q8IZW8 715 aa18.83■□□□□ 0.6
ERCC1-213ENST00000592023 PANK1Q8TE04 598 aa18.83■□□□□ 0.6
ERCC1-213ENST00000592023 GNL3LQ9NVN8 582 aaKnown RBP18.83■□□□□ 0.6
ERCC1-213ENST00000592023 ZNF70Q9UC06 446 aaPredicted RBP18.83■□□□□ 0.6
ERCC1-213ENST00000592023 MAST3O60307 1309 aa18.82■□□□□ 0.6
ERCC1-213ENST00000592023 IFFO2Q5TF58 517 aa18.82■□□□□ 0.6
ERCC1-213ENST00000592023 WDR66Q8TBY9 1149 aa18.82■□□□□ 0.6
ERCC1-213ENST00000592023 TEKT1Q969V4 418 aa18.82■□□□□ 0.6
ERCC1-213ENST00000592023 PRDM10Q9NQV6 1147 aa18.82■□□□□ 0.6
ERCC1-213ENST00000592023 FZD1Q9UP38 647 aa18.82■□□□□ 0.6
ERCC1-213ENST00000592023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.82■□□□□ 0.6
ERCC1-213ENST00000592023 A0A1B0GUL7 405 aa18.81■□□□□ 0.6
ERCC1-213ENST00000592023 KIF23Q02241 960 aaPredicted RBP18.81■□□□□ 0.6
ERCC1-213ENST00000592023 RASA3Q14644 834 aa18.81■□□□□ 0.6
ERCC1-213ENST00000592023 CCDC102BQ68D86 513 aa18.81■□□□□ 0.6
ERCC1-213ENST00000592023 ARMC9Q7Z3E5 817 aa18.81■□□□□ 0.6
ERCC1-213ENST00000592023 ANGEL1Q9UNK9 670 aaKnown RBP18.81■□□□□ 0.6
ERCC1-213ENST00000592023 AKAP2Q9Y2D5 859 aa18.81■□□□□ 0.6
ERCC1-213ENST00000592023 SUGT1Q9Y2Z0 365 aa18.81■□□□□ 0.6
ERCC1-213ENST00000592023 TCP10L2B9ZVM9 353 aa18.8■□□□□ 0.6
ERCC1-213ENST00000592023 PRDX5P30044 214 aa18.8■□□□□ 0.6
ERCC1-213ENST00000592023 TIMM10P62072 90 aa18.8■□□□□ 0.6
ERCC1-213ENST00000592023 HDLBPQ00341 1268 aaKnown RBP18.8■□□□□ 0.6
ERCC1-213ENST00000592023 G3BP1Q13283 466 aaKnown RBP eCLIP18.8■□□□□ 0.6
ERCC1-213ENST00000592023 TNFAIP1Q13829 316 aa18.8■□□□□ 0.6
ERCC1-213ENST00000592023 DENND2AQ9ULE3 1009 aa18.8■□□□□ 0.6
ERCC1-213ENST00000592023 SEMA3EO15041 775 aa18.79■□□□□ 0.6
ERCC1-213ENST00000592023 ZBTB7BO15156 539 aaPredicted RBP18.79■□□□□ 0.6
ERCC1-213ENST00000592023 POLA2Q14181 598 aa18.79■□□□□ 0.6
ERCC1-213ENST00000592023 NBPF12Q5TAG4 269 aaPredicted RBP18.79■□□□□ 0.6
ERCC1-213ENST00000592023 XAGE2Q96GT9 111 aa18.79■□□□□ 0.6
ERCC1-213ENST00000592023 OTOFQ9HC10 1997 aa18.79■□□□□ 0.6
ERCC1-213ENST00000592023 CA12O43570 354 aa18.78■□□□□ 0.6
ERCC1-213ENST00000592023 CACNB3P54284 484 aa18.78■□□□□ 0.6
ERCC1-213ENST00000592023 OS9Q13438 667 aaPredicted RBP18.78■□□□□ 0.6
ERCC1-213ENST00000592023 RASGRF1Q13972 1273 aa18.78■□□□□ 0.6
ERCC1-213ENST00000592023 MVPQ14764 893 aaKnown RBP18.78■□□□□ 0.6
ERCC1-213ENST00000592023 SSH3Q8TE77 659 aa18.78■□□□□ 0.6
ERCC1-213ENST00000592023 ZDHHC15Q96MV8 337 aa18.78■□□□□ 0.6
ERCC1-213ENST00000592023 NEUROD6Q96NK8 337 aa18.78■□□□□ 0.6
ERCC1-213ENST00000592023 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
ERCC1-213ENST00000592023 RCAN3Q9UKA8 241 aa18.78■□□□□ 0.6
ERCC1-213ENST00000592023 SALL1Q9NSC2 1324 aa18.77■□□□□ 0.6
ERCC1-213ENST00000592023 ATP8B2P98198 1209 aa18.77■□□□□ 0.6
ERCC1-213ENST00000592023 MKRN3Q13064 507 aaKnown RBP18.77■□□□□ 0.6
ERCC1-213ENST00000592023 DIXDC1Q155Q3 683 aa18.77■□□□□ 0.6
ERCC1-213ENST00000592023 SUPT20HL1Q3ZLR7 823 aa18.77■□□□□ 0.6
ERCC1-213ENST00000592023 CDAN1Q8IWY9 1227 aa18.77■□□□□ 0.6
ERCC1-213ENST00000592023 TMOD2Q9NZR1 351 aa18.77■□□□□ 0.6
ERCC1-213ENST00000592023 PPP1R12BO60237 982 aaPredicted RBP18.76■□□□□ 0.59
ERCC1-213ENST00000592023 LDHBP07195 334 aaKnown RBP18.76■□□□□ 0.59
ERCC1-213ENST00000592023 TNNI2P48788 182 aa18.76■□□□□ 0.59
ERCC1-213ENST00000592023 GORABQ5T7V8 394 aa18.76■□□□□ 0.59
ERCC1-213ENST00000592023 HHIPL2Q6UWX4 724 aa18.76■□□□□ 0.59
ERCC1-213ENST00000592023 TMEM39BQ9GZU3 492 aa18.76■□□□□ 0.59
ERCC1-213ENST00000592023 AKAP11Q9UKA4 1901 aa18.76■□□□□ 0.59
ERCC1-213ENST00000592023 SURF6O75683 361 aaKnown RBP18.75■□□□□ 0.59
ERCC1-213ENST00000592023 MS4A1P11836 297 aa18.75■□□□□ 0.59
ERCC1-213ENST00000592023 LDLRAD1Q5T700 205 aa18.75■□□□□ 0.59
ERCC1-213ENST00000592023 APOBEC3HQ6NTF7 200 aaKnown RBP18.75■□□□□ 0.59
ERCC1-213ENST00000592023 CEP85Q6P2H3 762 aa18.75■□□□□ 0.59
ERCC1-213ENST00000592023 CSRNP1Q96S65 589 aa18.75■□□□□ 0.59
ERCC1-213ENST00000592023 MRIQ9BWK5 157 aa18.75■□□□□ 0.59
ERCC1-213ENST00000592023 DAGLAQ9Y4D2 1042 aa18.75■□□□□ 0.59
ERCC1-213ENST00000592023 MAP3K11Q16584 847 aa18.74■□□□□ 0.59
ERCC1-213ENST00000592023 ZGPATQ8N5A5 531 aaKnown RBP18.74■□□□□ 0.59
ERCC1-213ENST00000592023 CLMNQ96JQ2 1002 aa18.74■□□□□ 0.59
ERCC1-213ENST00000592023 TEPSINQ96N21 525 aa18.74■□□□□ 0.59
ERCC1-213ENST00000592023 ABCF2Q9UG63 623 aa18.74■□□□□ 0.59
ERCC1-213ENST00000592023 COG6Q9Y2V7 657 aa18.74■□□□□ 0.59
ERCC1-213ENST00000592023 PDS5AQ29RF7 1337 aaKnown RBP18.74■□□□□ 0.59
ERCC1-213ENST00000592023 MYH2Q9UKX2 1941 aa18.73■□□□□ 0.59
ERCC1-213ENST00000592023 ZBTB22O15209 634 aa18.73■□□□□ 0.59
ERCC1-213ENST00000592023 IREB2P48200 963 aaKnown RBP18.73■□□□□ 0.59
ERCC1-213ENST00000592023 TNNI3KQ59H18 835 aa18.73■□□□□ 0.59
ERCC1-213ENST00000592023 DZIP1Q86YF9 867 aaKnown RBP18.73■□□□□ 0.59
ERCC1-213ENST00000592023 FPGT-TNNI3KV9GXZ4 949 aa18.73■□□□□ 0.59
ERCC1-213ENST00000592023 PI16Q6UXB8 463 aa18.72■□□□□ 0.59
ERCC1-213ENST00000592023 RNF186Q9NXI6 227 aa18.72■□□□□ 0.59
ERCC1-213ENST00000592023 SAGE1Q9NXZ1 904 aa18.72■□□□□ 0.59
ERCC1-213ENST00000592023 USP2O75604 605 aaPredicted RBP18.71■□□□□ 0.59
ERCC1-213ENST00000592023 TRPA1O75762 1119 aa18.71■□□□□ 0.59
ERCC1-213ENST00000592023 CAPN15O75808 1086 aa18.71■□□□□ 0.59
ERCC1-213ENST00000592023 ARID4AP29374 1257 aaPredicted RBP18.71■□□□□ 0.59
ERCC1-213ENST00000592023 SPRYD7Q5W111 196 aa18.71■□□□□ 0.59
ERCC1-213ENST00000592023 REM2Q8IYK8 340 aaPredicted RBP18.71■□□□□ 0.59
ERCC1-213ENST00000592023 HMG20BQ9P0W2 317 aa18.71■□□□□ 0.59
ERCC1-213ENST00000592023 DDX19BQ9UMR2 479 aa18.71■□□□□ 0.59
ERCC1-213ENST00000592023 LAMB1P07942 1786 aa18.7■□□□□ 0.58
ERCC1-213ENST00000592023 MAST2Q6P0Q8 1798 aa18.7■□□□□ 0.58
ERCC1-213ENST00000592023 RPAP1Q9BWH6 1393 aaPredicted RBP18.7■□□□□ 0.58
ERCC1-213ENST00000592023 CDC42EP5Q6NZY7 148 aa18.7■□□□□ 0.58
ERCC1-213ENST00000592023 FAM83AQ86UY5 434 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms