RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 MVPQ14764 893 aaKnown RBP17.26■□□□□ 0.35
CLIP3-205ENST00000592017 LPIN2Q92539 896 aa17.26■□□□□ 0.35
CLIP3-205ENST00000592017 CSRNP1Q96S65 589 aa17.26■□□□□ 0.35
CLIP3-205ENST00000592017 SERPINA10Q9UK55 444 aa17.26■□□□□ 0.35
CLIP3-205ENST00000592017 NF2P35240 595 aa17.25■□□□□ 0.35
CLIP3-205ENST00000592017 PRKG1Q13976 671 aa17.25■□□□□ 0.35
CLIP3-205ENST00000592017 VEZTQ9HBM0 779 aa17.25■□□□□ 0.35
CLIP3-205ENST00000592017 FZD1Q9UP38 647 aa17.25■□□□□ 0.35
CLIP3-205ENST00000592017 MYO1BO43795 1136 aa17.24■□□□□ 0.35
CLIP3-205ENST00000592017 CRKP46108 304 aa17.24■□□□□ 0.35
CLIP3-205ENST00000592017 LDLRAD1Q5T700 205 aa17.24■□□□□ 0.35
CLIP3-205ENST00000592017 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
CLIP3-205ENST00000592017 ZNF70Q9UC06 446 aaPredicted RBP17.24■□□□□ 0.35
CLIP3-205ENST00000592017 DDX19BQ9UMR2 479 aa17.24■□□□□ 0.35
CLIP3-205ENST00000592017 ATP8B2P98198 1209 aa17.23■□□□□ 0.35
CLIP3-205ENST00000592017 TFCP2Q12800 502 aa17.23■□□□□ 0.35
CLIP3-205ENST00000592017 G3BP1Q13283 466 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLIP3-205ENST00000592017 OS9Q13438 667 aaPredicted RBP17.23■□□□□ 0.35
CLIP3-205ENST00000592017 RASA3Q14644 834 aa17.23■□□□□ 0.35
CLIP3-205ENST00000592017 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
CLIP3-205ENST00000592017 TBC1D22AQ8WUA7 517 aa17.23■□□□□ 0.35
CLIP3-205ENST00000592017 TDRD3Q9H7E2 651 aaKnown RBP17.23■□□□□ 0.35
CLIP3-205ENST00000592017 RNF186Q9NXI6 227 aa17.23■□□□□ 0.35
CLIP3-205ENST00000592017 PPP2R3BQ9Y5P8 575 aa17.23■□□□□ 0.35
CLIP3-205ENST00000592017 PAPPA2Q9BXP8 1791 aa17.23■□□□□ 0.35
CLIP3-205ENST00000592017 POLA2Q14181 598 aa17.22■□□□□ 0.35
CLIP3-205ENST00000592017 NBPF12Q5TAG4 269 aaPredicted RBP17.22■□□□□ 0.35
CLIP3-205ENST00000592017 CEP85Q6P2H3 762 aa17.22■□□□□ 0.35
CLIP3-205ENST00000592017 ARMC9Q7Z3E5 817 aa17.22■□□□□ 0.35
CLIP3-205ENST00000592017 ANGEL1Q9UNK9 670 aaKnown RBP17.22■□□□□ 0.35
CLIP3-205ENST00000592017 SSC5DA1L4H1 1573 aa17.21■□□□□ 0.35
CLIP3-205ENST00000592017 TRPA1O75762 1119 aa17.21■□□□□ 0.35
CLIP3-205ENST00000592017 ADORA1P30542 326 aa17.21■□□□□ 0.35
CLIP3-205ENST00000592017 HDLBPQ00341 1268 aaKnown RBP17.21■□□□□ 0.35
CLIP3-205ENST00000592017 SSH3Q8TE77 659 aa17.21■□□□□ 0.35
CLIP3-205ENST00000592017 AKAP2Q9Y2D5 859 aa17.21■□□□□ 0.35
CLIP3-205ENST00000592017 COL1A1P02452 1464 aaPredicted RBP17.2■□□□□ 0.34
CLIP3-205ENST00000592017 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
CLIP3-205ENST00000592017 SURF6O75683 361 aaKnown RBP17.2■□□□□ 0.34
CLIP3-205ENST00000592017 TIMM10P62072 90 aa17.2■□□□□ 0.34
CLIP3-205ENST00000592017 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
CLIP3-205ENST00000592017 SUPT20HL1Q3ZLR7 823 aa17.2■□□□□ 0.34
CLIP3-205ENST00000592017 CDAN1Q8IWY9 1227 aa17.2■□□□□ 0.34
CLIP3-205ENST00000592017 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
CLIP3-205ENST00000592017 SAGE1Q9NXZ1 904 aa17.2■□□□□ 0.34
CLIP3-205ENST00000592017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.2■□□□□ 0.34
CLIP3-205ENST00000592017 PHKA1P46020 1223 aa17.19■□□□□ 0.34
CLIP3-205ENST00000592017 PDE3AQ14432 1141 aa17.19■□□□□ 0.34
CLIP3-205ENST00000592017 MAP3K11Q16584 847 aa17.19■□□□□ 0.34
CLIP3-205ENST00000592017 APOBEC3HQ6NTF7 200 aaKnown RBP17.19■□□□□ 0.34
CLIP3-205ENST00000592017 REM2Q8IYK8 340 aaPredicted RBP17.19■□□□□ 0.34
CLIP3-205ENST00000592017 TEKT1Q969V4 418 aa17.19■□□□□ 0.34
CLIP3-205ENST00000592017 CLMNQ96JQ2 1002 aa17.19■□□□□ 0.34
CLIP3-205ENST00000592017 ZDHHC15Q96MV8 337 aa17.19■□□□□ 0.34
CLIP3-205ENST00000592017 TEPSINQ96N21 525 aa17.19■□□□□ 0.34
CLIP3-205ENST00000592017 NEUROD6Q96NK8 337 aa17.19■□□□□ 0.34
CLIP3-205ENST00000592017 GNL3LQ9NVN8 582 aaKnown RBP17.19■□□□□ 0.34
CLIP3-205ENST00000592017 SUGT1Q9Y2Z0 365 aa17.19■□□□□ 0.34
CLIP3-205ENST00000592017 TCP10L2B9ZVM9 353 aa17.18■□□□□ 0.34
CLIP3-205ENST00000592017 PPP1R12BO60237 982 aaPredicted RBP17.18■□□□□ 0.34
CLIP3-205ENST00000592017 USP2O75604 605 aaPredicted RBP17.18■□□□□ 0.34
CLIP3-205ENST00000592017 WDR66Q8TBY9 1149 aa17.18■□□□□ 0.34
CLIP3-205ENST00000592017 CHMP4BQ9H444 224 aaKnown RBP17.18■□□□□ 0.34
CLIP3-205ENST00000592017 TM4SF4P48230 202 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 CACNB3P54284 484 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 GORABQ5T7V8 394 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 SPRYD7Q5W111 196 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 CCDC102BQ68D86 513 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 SLC10A4Q96EP9 437 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 XAGE2Q96GT9 111 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 ABHD8Q96I13 439 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 TMEM39BQ9GZU3 492 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 ZBTB40Q9NUA8 1239 aa17.17■□□□□ 0.34
CLIP3-205ENST00000592017 RRP1P56182 461 aaKnown RBP17.16■□□□□ 0.34
CLIP3-205ENST00000592017 TNFAIP1Q13829 316 aa17.16■□□□□ 0.34
CLIP3-205ENST00000592017 HHIPL2Q6UWX4 724 aa17.16■□□□□ 0.34
CLIP3-205ENST00000592017 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.16■□□□□ 0.34
CLIP3-205ENST00000592017 EXOC6BQ9Y2D4 811 aa17.16■□□□□ 0.34
CLIP3-205ENST00000592017 DENND2AQ9ULE3 1009 aa17.15■□□□□ 0.34
CLIP3-205ENST00000592017 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
CLIP3-205ENST00000592017 SEMA3EO15041 775 aa17.14■□□□□ 0.33
CLIP3-205ENST00000592017 ZBTB22O15209 634 aa17.14■□□□□ 0.33
CLIP3-205ENST00000592017 HMMRO75330 724 aa17.14■□□□□ 0.33
CLIP3-205ENST00000592017 PRDX5P30044 214 aa17.14■□□□□ 0.33
CLIP3-205ENST00000592017 DIXDC1Q155Q3 683 aa17.14■□□□□ 0.33
CLIP3-205ENST00000592017 RPAP2Q8IXW5 612 aaPredicted RBP17.14■□□□□ 0.33
CLIP3-205ENST00000592017 WNK4Q96J92 1243 aa17.14■□□□□ 0.33
CLIP3-205ENST00000592017 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
CLIP3-205ENST00000592017 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
CLIP3-205ENST00000592017 MAST3O60307 1309 aa17.14■□□□□ 0.33
CLIP3-205ENST00000592017 UNCXA6NJT0 531 aa17.13■□□□□ 0.33
CLIP3-205ENST00000592017 APBB1O00213 710 aa17.13■□□□□ 0.33
CLIP3-205ENST00000592017 GJA5P36382 358 aa17.13■□□□□ 0.33
CLIP3-205ENST00000592017 IREB2P48200 963 aaKnown RBP17.13■□□□□ 0.33
CLIP3-205ENST00000592017 TNNI2P48788 182 aa17.13■□□□□ 0.33
CLIP3-205ENST00000592017 RASGRF1Q13972 1273 aa17.13■□□□□ 0.33
CLIP3-205ENST00000592017 TNNI3KQ59H18 835 aa17.13■□□□□ 0.33
CLIP3-205ENST00000592017 FKBP1CQ5VVH2 108 aa17.13■□□□□ 0.33
CLIP3-205ENST00000592017 DAGLAQ9Y4D2 1042 aa17.13■□□□□ 0.33
CLIP3-205ENST00000592017 FPGT-TNNI3KV9GXZ4 949 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms