RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 AOC2O75106 756 aa33.69■■■□□ 2.98
SMAD4-213ENST00000591914 MRIQ9BWK5 157 aa33.69■■■□□ 2.98
SMAD4-213ENST00000591914 PPP2R3BQ9Y5P8 575 aa33.69■■■□□ 2.98
SMAD4-213ENST00000591914 NF2P35240 595 aa33.68■■■□□ 2.98
SMAD4-213ENST00000591914 MVPQ14764 893 aaKnown RBP33.68■■■□□ 2.98
SMAD4-213ENST00000591914 SPDYE2Q495Y8 402 aa33.68■■■□□ 2.98
SMAD4-213ENST00000591914 XAGE2Q96GT9 111 aa33.68■■■□□ 2.98
SMAD4-213ENST00000591914 DENND2AQ9ULE3 1009 aa33.68■■■□□ 2.98
SMAD4-213ENST00000591914 MAST3O60307 1309 aa33.68■■■□□ 2.98
SMAD4-213ENST00000591914 TEKT1Q969V4 418 aa33.67■■■□□ 2.98
SMAD4-213ENST00000591914 FAM155AB1AL88 458 aaPredicted RBP33.66■■■□□ 2.98
SMAD4-213ENST00000591914 FOXN1O15353 648 aa33.66■■■□□ 2.98
SMAD4-213ENST00000591914 NOGQ13253 232 aa33.66■■■□□ 2.98
SMAD4-213ENST00000591914 CEP85Q6P2H3 762 aa33.66■■■□□ 2.98
SMAD4-213ENST00000591914 TDRD3Q9H7E2 651 aaKnown RBP33.66■■■□□ 2.98
SMAD4-213ENST00000591914 VEZTQ9HBM0 779 aa33.66■■■□□ 2.98
SMAD4-213ENST00000591914 SALL1Q9NSC2 1324 aa33.66■■■□□ 2.98
SMAD4-213ENST00000591914 ZNF70Q9UC06 446 aaPredicted RBP33.66■■■□□ 2.98
SMAD4-213ENST00000591914 ZNF157P51786 506 aaPredicted RBP33.65■■■□□ 2.98
SMAD4-213ENST00000591914 MOB2Q70IA6 237 aa33.65■■■□□ 2.98
SMAD4-213ENST00000591914 CCDC102AQ96A19 550 aa33.65■■■□□ 2.98
SMAD4-213ENST00000591914 AIDAQ96BJ3 306 aa33.65■■■□□ 2.98
SMAD4-213ENST00000591914 ZDHHC15Q96MV8 337 aa33.65■■■□□ 2.98
SMAD4-213ENST00000591914 NOP58Q9Y2X3 529 aaKnown RBP33.65■■■□□ 2.98
SMAD4-213ENST00000591914 DDX19BQ9UMR2 479 aa33.64■■■□□ 2.98
SMAD4-213ENST00000591914 COG6Q9Y2V7 657 aa33.64■■■□□ 2.98
SMAD4-213ENST00000591914 PDS5AQ29RF7 1337 aaKnown RBP33.63■■■□□ 2.97
SMAD4-213ENST00000591914 SURF6O75683 361 aaKnown RBP33.63■■■□□ 2.97
SMAD4-213ENST00000591914 RASGRF1Q13972 1273 aa33.63■■■□□ 2.97
SMAD4-213ENST00000591914 NEUROD6Q96NK8 337 aa33.63■■■□□ 2.97
SMAD4-213ENST00000591914 TNFAIP1Q13829 316 aa33.62■■■□□ 2.97
SMAD4-213ENST00000591914 HHIPL2Q6UWX4 724 aa33.62■■■□□ 2.97
SMAD4-213ENST00000591914 GPR108Q9NPR9 543 aa33.62■■■□□ 2.97
SMAD4-213ENST00000591914 SSC5DA1L4H1 1573 aa33.61■■■□□ 2.97
SMAD4-213ENST00000591914 UBE2Q2LH0YL09 131 aa33.61■■■□□ 2.97
SMAD4-213ENST00000591914 SLC10A3P09131 477 aa33.61■■■□□ 2.97
SMAD4-213ENST00000591914 PRDX5P30044 214 aa33.61■■■□□ 2.97
SMAD4-213ENST00000591914 RASA3Q14644 834 aa33.61■■■□□ 2.97
SMAD4-213ENST00000591914 OS9Q13438 667 aaPredicted RBP33.6■■■□□ 2.97
SMAD4-213ENST00000591914 TTLL12Q14166 644 aaPredicted RBP33.6■■■□□ 2.97
SMAD4-213ENST00000591914 APOBEC3HQ6NTF7 200 aaKnown RBP33.6■■■□□ 2.97
SMAD4-213ENST00000591914 ZIC5Q96T25 663 aa33.6■■■□□ 2.97
SMAD4-213ENST00000591914 LDHBP07195 334 aaKnown RBP33.59■■■□□ 2.97
SMAD4-213ENST00000591914 ZBTB40Q9NUA8 1239 aa33.59■■■□□ 2.97
SMAD4-213ENST00000591914 CTCFP49711 727 aaPredicted RBP33.58■■■□□ 2.97
SMAD4-213ENST00000591914 PDE3AQ14432 1141 aa33.58■■■□□ 2.97
SMAD4-213ENST00000591914 ARMC9Q7Z3E5 817 aa33.58■■■□□ 2.97
SMAD4-213ENST00000591914 RASAL3Q86YV0 1011 aa33.58■■■□□ 2.97
SMAD4-213ENST00000591914 SUPT20HL1Q3ZLR7 823 aa33.57■■■□□ 2.96
SMAD4-213ENST00000591914 TNNI3KQ59H18 835 aa33.57■■■□□ 2.96
SMAD4-213ENST00000591914 GORABQ5T7V8 394 aa33.57■■■□□ 2.96
SMAD4-213ENST00000591914 COL13A1Q5TAT6 717 aaPredicted RBP33.57■■■□□ 2.96
SMAD4-213ENST00000591914 ZGPATQ8N5A5 531 aaKnown RBP33.57■■■□□ 2.96
SMAD4-213ENST00000591914 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.57■■■□□ 2.96
SMAD4-213ENST00000591914 FPGT-TNNI3KV9GXZ4 949 aa33.57■■■□□ 2.96
SMAD4-213ENST00000591914 PRKG1Q13976 671 aa33.56■■■□□ 2.96
SMAD4-213ENST00000591914 NBPF12Q5TAG4 269 aaPredicted RBP33.56■■■□□ 2.96
SMAD4-213ENST00000591914 C20orf194Q5TEA3 1177 aa33.56■■■□□ 2.96
SMAD4-213ENST00000591914 BEGAINQ9BUH8 593 aa33.56■■■□□ 2.96
SMAD4-213ENST00000591914 TCP10L2B9ZVM9 353 aa33.55■■■□□ 2.96
SMAD4-213ENST00000591914 ARID4AP29374 1257 aaPredicted RBP33.55■■■□□ 2.96
SMAD4-213ENST00000591914 DIXDC1Q155Q3 683 aa33.55■■■□□ 2.96
SMAD4-213ENST00000591914 MAP3K11Q16584 847 aa33.55■■■□□ 2.96
SMAD4-213ENST00000591914 LDLRAD1Q5T700 205 aa33.55■■■□□ 2.96
SMAD4-213ENST00000591914 CHMP4BQ9H444 224 aaKnown RBP33.55■■■□□ 2.96
SMAD4-213ENST00000591914 DAGLAQ9Y4D2 1042 aa33.55■■■□□ 2.96
SMAD4-213ENST00000591914 TNNI2P48788 182 aa33.54■■■□□ 2.96
SMAD4-213ENST00000591914 TEPSINQ96N21 525 aa33.54■■■□□ 2.96
SMAD4-213ENST00000591914 HMG20BQ9P0W2 317 aa33.54■■■□□ 2.96
SMAD4-213ENST00000591914 ANGEL1Q9UNK9 670 aaKnown RBP33.54■■■□□ 2.96
SMAD4-213ENST00000591914 KIF23Q02241 960 aaPredicted RBP33.53■■■□□ 2.96
SMAD4-213ENST00000591914 FKBP1CQ5VVH2 108 aa33.53■■■□□ 2.96
SMAD4-213ENST00000591914 RPAP2Q8IXW5 612 aaPredicted RBP33.53■■■□□ 2.96
SMAD4-213ENST00000591914 FZD1Q9UP38 647 aa33.53■■■□□ 2.96
SMAD4-213ENST00000591914 PPP1R12BO60237 982 aaPredicted RBP33.52■■■□□ 2.96
SMAD4-213ENST00000591914 HSPA8P11142 646 aaKnown RBP33.52■■■□□ 2.96
SMAD4-213ENST00000591914 CACNB3P54284 484 aa33.52■■■□□ 2.96
SMAD4-213ENST00000591914 SPATA5Q8NB90 893 aa33.52■■■□□ 2.96
SMAD4-213ENST00000591914 TMEM39BQ9GZU3 492 aa33.52■■■□□ 2.96
SMAD4-213ENST00000591914 PRDM10Q9NQV6 1147 aa33.52■■■□□ 2.96
SMAD4-213ENST00000591914 TMOD2Q9NZR1 351 aa33.52■■■□□ 2.96
SMAD4-213ENST00000591914 CA12O43570 354 aa33.51■■■□□ 2.95
SMAD4-213ENST00000591914 ABCF2Q9UG63 623 aa33.51■■■□□ 2.95
SMAD4-213ENST00000591914 UQCRFS1P1P0C7P4 283 aa33.5■■■□□ 2.95
SMAD4-213ENST00000591914 SPTY2D1Q68D10 685 aaPredicted RBP33.5■■■□□ 2.95
SMAD4-213ENST00000591914 PI16Q6UXB8 463 aa33.5■■■□□ 2.95
SMAD4-213ENST00000591914 FAM83AQ86UY5 434 aa33.5■■■□□ 2.95
SMAD4-213ENST00000591914 CDAN1Q8IWY9 1227 aa33.5■■■□□ 2.95
SMAD4-213ENST00000591914 DBNDD2Q9BQY9 259 aa33.5■■■□□ 2.95
SMAD4-213ENST00000591914 EXOC6BQ9Y2D4 811 aa33.5■■■□□ 2.95
SMAD4-213ENST00000591914 MCAMP43121 646 aa33.49■■■□□ 2.95
SMAD4-213ENST00000591914 LBX1P52954 281 aa33.49■■■□□ 2.95
SMAD4-213ENST00000591914 ERC1Q8IUD2 1116 aa33.49■■■□□ 2.95
SMAD4-213ENST00000591914 SIRT2Q8IXJ6 389 aa33.49■■■□□ 2.95
SMAD4-213ENST00000591914 UNCXA6NJT0 531 aa33.48■■■□□ 2.95
SMAD4-213ENST00000591914 MYH2Q9UKX2 1941 aa33.47■■■□□ 2.95
SMAD4-213ENST00000591914 USP2O75604 605 aaPredicted RBP33.47■■■□□ 2.95
SMAD4-213ENST00000591914 CDC42EP5Q6NZY7 148 aa33.47■■■□□ 2.95
SMAD4-213ENST00000591914 DZIP1Q86YF9 867 aaKnown RBP33.47■■■□□ 2.95
SMAD4-213ENST00000591914 CSRNP1Q96S65 589 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms