RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
VPS4B-207ENST00000591519 MCOLN1Q9GZU1 580 aa13.19□□□□□ -0.3
VPS4B-207ENST00000591519 HDAC9Q9UKV0 1011 aa13.19□□□□□ -0.3
VPS4B-207ENST00000591519 PAPPA2Q9BXP8 1791 aa13.19□□□□□ -0.3
VPS4B-207ENST00000591519 AKAP11Q9UKA4 1901 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 UBE2Q2LH0YL09 131 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 SNAP23O00161 211 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 TRPA1O75762 1119 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 PRAMEF18Q5VWM3 479 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 LDHAL6AQ6ZMR3 332 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 KIAA0825Q8IV33 1275 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
VPS4B-207ENST00000591519 FBXW7Q969H0 707 aa13.18□□□□□ -0.3
VPS4B-207ENST00000591519 SCAF8Q9UPN6 1271 aaKnown RBP13.18□□□□□ -0.3
VPS4B-207ENST00000591519 SASH1O94885 1247 aa13.17□□□□□ -0.3
VPS4B-207ENST00000591519 NF2P35240 595 aa13.17□□□□□ -0.3
VPS4B-207ENST00000591519 TM4SF4P48230 202 aa13.17□□□□□ -0.3
VPS4B-207ENST00000591519 MOB2Q70IA6 237 aa13.17□□□□□ -0.3
VPS4B-207ENST00000591519 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
VPS4B-207ENST00000591519 CERS5Q8N5B7 392 aa13.17□□□□□ -0.3
VPS4B-207ENST00000591519 KAZALD1Q96I82 304 aa13.17□□□□□ -0.3
VPS4B-207ENST00000591519 SRCIN1Q9C0H9 1055 aa13.17□□□□□ -0.3
VPS4B-207ENST00000591519 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
VPS4B-207ENST00000591519 UTYO14607 1347 aa13.16□□□□□ -0.3
VPS4B-207ENST00000591519 DGKZQ13574 1117 aa13.16□□□□□ -0.3
VPS4B-207ENST00000591519 LDLRAD1Q5T700 205 aa13.16□□□□□ -0.3
VPS4B-207ENST00000591519 DIEXFQ68CQ4 756 aaKnown RBP13.16□□□□□ -0.3
VPS4B-207ENST00000591519 ZNF594Q96JF6 807 aaPredicted RBP13.16□□□□□ -0.3
VPS4B-207ENST00000591519 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
VPS4B-207ENST00000591519 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
VPS4B-207ENST00000591519 UBE4AQ14139 1066 aa13.15□□□□□ -0.3
VPS4B-207ENST00000591519 DLGAP5Q15398 846 aa13.15□□□□□ -0.3
VPS4B-207ENST00000591519 ZNF804AQ7Z570 1209 aa13.15□□□□□ -0.3
VPS4B-207ENST00000591519 DEFB129Q9H1M3 183 aa13.15□□□□□ -0.3
VPS4B-207ENST00000591519 FAM205AQ6ZU69 1335 aa13.14□□□□□ -0.31
VPS4B-207ENST00000591519 NBPF7P0C2Y1 421 aaPredicted RBP13.14□□□□□ -0.31
VPS4B-207ENST00000591519 PTPN12Q05209 780 aaKnown RBP13.14□□□□□ -0.31
VPS4B-207ENST00000591519 MAP3K11Q16584 847 aa13.14□□□□□ -0.31
VPS4B-207ENST00000591519 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
VPS4B-207ENST00000591519 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
VPS4B-207ENST00000591519 TAF7LQ5H9L4 462 aa13.14□□□□□ -0.31
VPS4B-207ENST00000591519 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
VPS4B-207ENST00000591519 ARMC9Q7Z3E5 817 aa13.14□□□□□ -0.31
VPS4B-207ENST00000591519 TDRD7Q8NHU6 1098 aaKnown RBP13.14□□□□□ -0.31
VPS4B-207ENST00000591519 CNNM1Q9NRU3 951 aa13.14□□□□□ -0.31
VPS4B-207ENST00000591519 RIPOR2Q9Y4F9 1068 aa13.14□□□□□ -0.31
VPS4B-207ENST00000591519 PPP2R3BQ9Y5P8 575 aa13.14□□□□□ -0.31
VPS4B-207ENST00000591519 A0A1B0GUL6 1792 aa13.14□□□□□ -0.31
VPS4B-207ENST00000591519 COL1A1P02452 1464 aaPredicted RBP13.13□□□□□ -0.31
VPS4B-207ENST00000591519 UNCXA6NJT0 531 aa13.13□□□□□ -0.31
VPS4B-207ENST00000591519 TTLL12Q14166 644 aaPredicted RBP13.13□□□□□ -0.31
VPS4B-207ENST00000591519 MRPL50Q8N5N7 158 aaKnown RBP13.13□□□□□ -0.31
VPS4B-207ENST00000591519 SUCLG2Q96I99 432 aa13.13□□□□□ -0.31
VPS4B-207ENST00000591519 PRMT6Q96LA8 375 aaPredicted RBP13.13□□□□□ -0.31
VPS4B-207ENST00000591519 CFHR5Q9BXR6 569 aa13.13□□□□□ -0.31
VPS4B-207ENST00000591519 MYO1BO43795 1136 aa13.12□□□□□ -0.31
VPS4B-207ENST00000591519 PLIN1O60240 522 aa13.12□□□□□ -0.31
VPS4B-207ENST00000591519 MLLT1Q03111 559 aaPredicted RBP13.12□□□□□ -0.31
VPS4B-207ENST00000591519 CFAP100Q494V2 611 aa13.12□□□□□ -0.31
VPS4B-207ENST00000591519 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
VPS4B-207ENST00000591519 FBXO22Q8NEZ5 403 aa13.12□□□□□ -0.31
VPS4B-207ENST00000591519 FAM84BQ96KN1 310 aaPredicted RBP13.12□□□□□ -0.31
VPS4B-207ENST00000591519 PUS3Q9BZE2 481 aaKnown RBP13.12□□□□□ -0.31
VPS4B-207ENST00000591519 PTPRCP08575 1304 aa13.12□□□□□ -0.31
VPS4B-207ENST00000591519 MROH5Q6ZUA9 1318 aa13.12□□□□□ -0.31
VPS4B-207ENST00000591519 E9PSI1 815 aa13.11□□□□□ -0.31
VPS4B-207ENST00000591519 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
VPS4B-207ENST00000591519 HIBADHP31937 336 aaKnown RBP13.11□□□□□ -0.31
VPS4B-207ENST00000591519 INHBEP58166 350 aa13.11□□□□□ -0.31
VPS4B-207ENST00000591519 SUPT20HL1Q3ZLR7 823 aa13.11□□□□□ -0.31
VPS4B-207ENST00000591519 SPRYD7Q5W111 196 aa13.11□□□□□ -0.31
VPS4B-207ENST00000591519 CTU1Q7Z7A3 348 aaKnown RBP13.11□□□□□ -0.31
VPS4B-207ENST00000591519 ANGEL1Q9UNK9 670 aaKnown RBP13.11□□□□□ -0.31
VPS4B-207ENST00000591519 PCDHAC2Q9Y5I4 1007 aa13.11□□□□□ -0.31
VPS4B-207ENST00000591519 STK25O00506 426 aa13.1□□□□□ -0.31
VPS4B-207ENST00000591519 PPP1R12BO60237 982 aaPredicted RBP13.1□□□□□ -0.31
VPS4B-207ENST00000591519 SLFN5Q08AF3 891 aa13.1□□□□□ -0.31
VPS4B-207ENST00000591519 SREBF2Q12772 1141 aa13.1□□□□□ -0.31
VPS4B-207ENST00000591519 PKN2Q16513 984 aaKnown RBP13.1□□□□□ -0.31
VPS4B-207ENST00000591519 FBXO33Q7Z6M2 555 aa13.1□□□□□ -0.31
VPS4B-207ENST00000591519 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
VPS4B-207ENST00000591519 USP44Q9H0E7 712 aa13.1□□□□□ -0.31
VPS4B-207ENST00000591519 SERPINA10Q9UK55 444 aa13.1□□□□□ -0.31
VPS4B-207ENST00000591519 ECM29Q5VYK3 1845 aa13.09□□□□□ -0.31
VPS4B-207ENST00000591519 F8W031 263 aaPredicted RBP13.09□□□□□ -0.31
VPS4B-207ENST00000591519 TBC1D8O95759 1140 aa13.09□□□□□ -0.31
VPS4B-207ENST00000591519 GYG1P46976 350 aa13.09□□□□□ -0.31
VPS4B-207ENST00000591519 PRKG1Q13976 671 aa13.09□□□□□ -0.31
VPS4B-207ENST00000591519 MFSD14BQ5SR56 506 aa13.09□□□□□ -0.31
VPS4B-207ENST00000591519 ZNF296Q8WUU4 475 aaPredicted RBP13.09□□□□□ -0.31
VPS4B-207ENST00000591519 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
VPS4B-207ENST00000591519 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
VPS4B-207ENST00000591519 MRIQ9BWK5 157 aa13.09□□□□□ -0.31
VPS4B-207ENST00000591519 MFRPQ9BY79 579 aa13.09□□□□□ -0.31
VPS4B-207ENST00000591519 BICC1Q9H694 974 aaKnown RBP13.09□□□□□ -0.31
VPS4B-207ENST00000591519 CLRN2A0PK11 232 aa13.08□□□□□ -0.32
VPS4B-207ENST00000591519 GPR25O00155 361 aa13.08□□□□□ -0.32
VPS4B-207ENST00000591519 PDE8BO95263 885 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 412.8 ms