RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 PAPPA2Q9BXP8 1791 aa20.32■□□□□ 0.84
GCDH-213ENST00000590627 AKAP11Q9UKA4 1901 aa20.32■□□□□ 0.84
GCDH-213ENST00000590627 PDE4AP27815 886 aa20.32■□□□□ 0.84
GCDH-213ENST00000590627 UBE4AQ14139 1066 aa20.32■□□□□ 0.84
GCDH-213ENST00000590627 DACT2Q5SW24 774 aa20.32■□□□□ 0.84
GCDH-213ENST00000590627 STRIP1Q5VSL9 837 aa20.32■□□□□ 0.84
GCDH-213ENST00000590627 AACSQ86V21 672 aa20.32■□□□□ 0.84
GCDH-213ENST00000590627 REM2Q8IYK8 340 aaPredicted RBP20.32■□□□□ 0.84
GCDH-213ENST00000590627 HELBQ8NG08 1087 aaPredicted RBP20.32■□□□□ 0.84
GCDH-213ENST00000590627 LPIN2Q92539 896 aa20.32■□□□□ 0.84
GCDH-213ENST00000590627 SALL3Q9BXA9 1300 aa20.31■□□□□ 0.84
GCDH-213ENST00000590627 WTIPA6NIX2 430 aaPredicted RBP20.31■□□□□ 0.84
GCDH-213ENST00000590627 TAF5LO75529 589 aa20.31■□□□□ 0.84
GCDH-213ENST00000590627 DGKZQ13574 1117 aa20.31■□□□□ 0.84
GCDH-213ENST00000590627 ATP2B3Q16720 1220 aa20.31■□□□□ 0.84
GCDH-213ENST00000590627 OGFOD1Q8N543 542 aa20.31■□□□□ 0.84
GCDH-213ENST00000590627 A0A1B0GUL7 405 aa20.3■□□□□ 0.84
GCDH-213ENST00000590627 IFIT2P09913 472 aaKnown RBP20.3■□□□□ 0.84
GCDH-213ENST00000590627 RNF186Q9NXI6 227 aa20.3■□□□□ 0.84
GCDH-213ENST00000590627 TIMM10P62072 90 aa20.29■□□□□ 0.84
GCDH-213ENST00000590627 RASAL3Q86YV0 1011 aa20.29■□□□□ 0.84
GCDH-213ENST00000590627 PLEKHM2Q8IWE5 1019 aa20.29■□□□□ 0.84
GCDH-213ENST00000590627 OTUD7AQ8TE49 926 aaPredicted RBP20.29■□□□□ 0.84
GCDH-213ENST00000590627 CSRNP1Q96S65 589 aa20.29■□□□□ 0.84
GCDH-213ENST00000590627 STAP2Q9UGK3 403 aa20.29■□□□□ 0.84
GCDH-213ENST00000590627 DBNLQ9UJU6 430 aaKnown RBP20.29■□□□□ 0.84
GCDH-213ENST00000590627 A0A1B0GUL6 1792 aa20.29■□□□□ 0.84
GCDH-213ENST00000590627 ZNF804BA4D1E1 1349 aa20.28■□□□□ 0.84
GCDH-213ENST00000590627 SLC5A1P13866 664 aa20.28■□□□□ 0.84
GCDH-213ENST00000590627 MLLT1Q03111 559 aaPredicted RBP20.28■□□□□ 0.84
GCDH-213ENST00000590627 NBPF9Q3BBW0 867 aa20.28■□□□□ 0.84
GCDH-213ENST00000590627 CCDC8Q9H0W5 538 aaPredicted RBP20.28■□□□□ 0.84
GCDH-213ENST00000590627 OSBPL3Q9H4L5 887 aa20.28■□□□□ 0.84
GCDH-213ENST00000590627 WNT10BO00744 389 aa20.27■□□□□ 0.84
GCDH-213ENST00000590627 TRPA1O75762 1119 aa20.27■□□□□ 0.84
GCDH-213ENST00000590627 IFIT1P09914 478 aaKnown RBP20.27■□□□□ 0.84
GCDH-213ENST00000590627 MX1P20591 662 aa20.27■□□□□ 0.84
GCDH-213ENST00000590627 C15orf52Q6ZUT6 534 aaKnown RBP20.27■□□□□ 0.84
GCDH-213ENST00000590627 TXNRD3Q86VQ6 643 aa20.27■□□□□ 0.84
GCDH-213ENST00000590627 XAGE2Q96GT9 111 aa20.27■□□□□ 0.84
GCDH-213ENST00000590627 NEUROD6Q96NK8 337 aa20.27■□□□□ 0.84
GCDH-213ENST00000590627 DBNDD2Q9BQY9 259 aa20.27■□□□□ 0.84
GCDH-213ENST00000590627 AOX1Q06278 1338 aa20.27■□□□□ 0.83
GCDH-213ENST00000590627 PDE1AP54750 535 aa20.26■□□□□ 0.83
GCDH-213ENST00000590627 TTLL5Q6EMB2 1281 aa20.26■□□□□ 0.83
GCDH-213ENST00000590627 SKAP1Q86WV1 359 aa20.26■□□□□ 0.83
GCDH-213ENST00000590627 MXD3Q9BW11 206 aa20.26■□□□□ 0.83
GCDH-213ENST00000590627 TLR7Q9NYK1 1049 aaKnown RBP20.26■□□□□ 0.83
GCDH-213ENST00000590627 TTC41PQ6P2S7 1318 aa20.26■□□□□ 0.83
GCDH-213ENST00000590627 IRS2Q9Y4H2 1338 aa20.26■□□□□ 0.83
GCDH-213ENST00000590627 SNAP23O00161 211 aa20.25■□□□□ 0.83
GCDH-213ENST00000590627 KCNJ4P48050 445 aa20.25■□□□□ 0.83
GCDH-213ENST00000590627 FBXW7Q969H0 707 aa20.25■□□□□ 0.83
GCDH-213ENST00000590627 GPATCH3Q96I76 525 aa20.25■□□□□ 0.83
GCDH-213ENST00000590627 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
GCDH-213ENST00000590627 ECHDC1Q9NTX5 307 aa20.25■□□□□ 0.83
GCDH-213ENST00000590627 HDAC9Q9UKV0 1011 aa20.25■□□□□ 0.83
GCDH-213ENST00000590627 ADORA1P30542 326 aa20.24■□□□□ 0.83
GCDH-213ENST00000590627 NF2P35240 595 aa20.24■□□□□ 0.83
GCDH-213ENST00000590627 ZBTB22O15209 634 aa20.23■□□□□ 0.83
GCDH-213ENST00000590627 KLRK1P26718 216 aa20.23■□□□□ 0.83
GCDH-213ENST00000590627 RGS3P49796 1198 aa20.23■□□□□ 0.83
GCDH-213ENST00000590627 ZNF512BQ96KM6 892 aaPredicted RBP20.23■□□□□ 0.83
GCDH-213ENST00000590627 SCAF8Q9UPN6 1271 aaKnown RBP20.23■□□□□ 0.83
GCDH-213ENST00000590627 ARAP2Q8WZ64 1704 aa20.22■□□□□ 0.83
GCDH-213ENST00000590627 UBE2Q2LH0YL09 131 aa20.22■□□□□ 0.83
GCDH-213ENST00000590627 ATP5JP18859 108 aa20.22■□□□□ 0.83
GCDH-213ENST00000590627 GTF2IP78347 998 aa20.22■□□□□ 0.83
GCDH-213ENST00000590627 MOB2Q70IA6 237 aa20.22■□□□□ 0.83
GCDH-213ENST00000590627 FBXO33Q7Z6M2 555 aa20.22■□□□□ 0.83
GCDH-213ENST00000590627 APOBEC3FQ8IUX4 373 aaKnown RBP20.22■□□□□ 0.83
GCDH-213ENST00000590627 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
GCDH-213ENST00000590627 ERC2O15083 957 aa20.21■□□□□ 0.83
GCDH-213ENST00000590627 CCDC158Q5M9N0 1113 aa20.21■□□□□ 0.83
GCDH-213ENST00000590627 GORABQ5T7V8 394 aa20.21■□□□□ 0.83
GCDH-213ENST00000590627 PRAMEF18Q5VWM3 479 aa20.21■□□□□ 0.83
GCDH-213ENST00000590627 KIAA0825Q8IV33 1275 aa20.21■□□□□ 0.83
GCDH-213ENST00000590627 PI4K2BQ8TCG2 481 aa20.21■□□□□ 0.83
GCDH-213ENST00000590627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.21■□□□□ 0.83
GCDH-213ENST00000590627 ZBED3Q96IU2 234 aaPredicted RBP20.21■□□□□ 0.83
GCDH-213ENST00000590627 FAM84BQ96KN1 310 aaPredicted RBP20.21■□□□□ 0.83
GCDH-213ENST00000590627 GLRX3O76003 335 aaKnown RBP20.2■□□□□ 0.82
GCDH-213ENST00000590627 TTLL12Q14166 644 aaPredicted RBP20.2■□□□□ 0.82
GCDH-213ENST00000590627 CAVIN4Q5BKX8 364 aa20.2■□□□□ 0.82
GCDH-213ENST00000590627 CCDC102BQ68D86 513 aa20.2■□□□□ 0.82
GCDH-213ENST00000590627 COL1A1P02452 1464 aaPredicted RBP20.19■□□□□ 0.82
GCDH-213ENST00000590627 UQCRFS1P1P0C7P4 283 aa20.19■□□□□ 0.82
GCDH-213ENST00000590627 ARID4AP29374 1257 aaPredicted RBP20.19■□□□□ 0.82
GCDH-213ENST00000590627 PHKA1P46020 1223 aa20.19■□□□□ 0.82
GCDH-213ENST00000590627 BCAMP50895 628 aa20.19■□□□□ 0.82
GCDH-213ENST00000590627 TSHZ3Q63HK5 1081 aa20.19■□□□□ 0.82
GCDH-213ENST00000590627 CTU1Q7Z7A3 348 aaKnown RBP20.19■□□□□ 0.82
GCDH-213ENST00000590627 HIBADHP31937 336 aaKnown RBP20.18■□□□□ 0.82
GCDH-213ENST00000590627 GYG1P46976 350 aa20.18■□□□□ 0.82
GCDH-213ENST00000590627 TM4SF4P48230 202 aa20.18■□□□□ 0.82
GCDH-213ENST00000590627 TTC39AQ5SRH9 613 aa20.18■□□□□ 0.82
GCDH-213ENST00000590627 TTC22Q5TAA0 569 aa20.18■□□□□ 0.82
GCDH-213ENST00000590627 ARMC9Q7Z3E5 817 aa20.18■□□□□ 0.82
GCDH-213ENST00000590627 MTMR14Q8NCE2 650 aa20.18■□□□□ 0.82
GCDH-213ENST00000590627 FKBP1AP62942 108 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms