RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 CACNA1FO60840 1977 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 GNAI3P08754 354 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 ZBTB48P10074 688 aaPredicted RBP9.48□□□□□ -0.89
NPC1-208ENST00000590301 SLC5A1P13866 664 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 FGFR2P21802 821 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 TM4SF4P48230 202 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 RFX5P48382 616 aaPredicted RBP9.48□□□□□ -0.89
NPC1-208ENST00000590301 TNNI2P48788 182 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 INHBEP58166 350 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 PTPN12Q05209 780 aaKnown RBP9.48□□□□□ -0.89
NPC1-208ENST00000590301 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 MOB2Q70IA6 237 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 ERICH6Q7L0X2 663 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 SPRYD3Q8NCJ5 442 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 VEZTQ9HBM0 779 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 ANGEL1Q9UNK9 670 aaKnown RBP9.48□□□□□ -0.89
NPC1-208ENST00000590301 SCAF8Q9UPN6 1271 aaKnown RBP9.48□□□□□ -0.89
NPC1-208ENST00000590301 JAG2Q9Y219 1238 aa9.48□□□□□ -0.89
NPC1-208ENST00000590301 PSME4Q14997 1843 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 CLRN2A0PK11 232 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 MANSC4A6NHS7 340 aaPredicted RBP9.47□□□□□ -0.89
NPC1-208ENST00000590301 ALDH1A1P00352 501 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 IL15P40933 162 aaPredicted RBP9.47□□□□□ -0.89
NPC1-208ENST00000590301 CRKP46108 304 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 IREB2P48200 963 aaKnown RBP9.47□□□□□ -0.89
NPC1-208ENST00000590301 RASA3Q14644 834 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 FKBP1CQ5VVH2 108 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 SPRYD7Q5W111 196 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 INTS3Q68E01 1043 aaKnown RBP9.47□□□□□ -0.89
NPC1-208ENST00000590301 DZIP1LQ8IYY4 767 aaKnown RBP9.47□□□□□ -0.89
NPC1-208ENST00000590301 KLHDC4Q8TBB5 520 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 WDR66Q8TBY9 1149 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 TEKT1Q969V4 418 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 HOOK2Q96ED9 719 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 SLC10A4Q96EP9 437 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 CFHR5Q9BXR6 569 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 MCOLN1Q9GZU1 580 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 GNL3LQ9NVN8 582 aaKnown RBP9.47□□□□□ -0.89
NPC1-208ENST00000590301 CEP126Q9P2H0 1117 aa9.47□□□□□ -0.89
NPC1-208ENST00000590301 ZNF70Q9UC06 446 aaPredicted RBP9.47□□□□□ -0.89
NPC1-208ENST00000590301 SEMA3EO15041 775 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 BCAMP50895 628 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 CHAF1AQ13111 956 aaPredicted RBP9.46□□□□□ -0.9
NPC1-208ENST00000590301 DGKZQ13574 1117 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 NBR1Q14596 966 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 ATP2B3Q16720 1220 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 ATG9AQ7Z3C6 839 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 ANKRD13AQ8IZ07 590 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 ZDHHC15Q96MV8 337 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 COPRSQ9NQ92 184 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 TMOD2Q9NZR1 351 aa9.46□□□□□ -0.9
NPC1-208ENST00000590301 MTX1Q13505 466 aa9.45□□□□□ -0.9
NPC1-208ENST00000590301 PRKG1Q13976 671 aa9.45□□□□□ -0.9
NPC1-208ENST00000590301 PKN2Q16513 984 aaKnown RBP9.45□□□□□ -0.9
NPC1-208ENST00000590301 NBPF12Q5TAG4 269 aaPredicted RBP9.45□□□□□ -0.9
NPC1-208ENST00000590301 HHIPL2Q6UWX4 724 aa9.45□□□□□ -0.9
NPC1-208ENST00000590301 CTU1Q7Z7A3 348 aaKnown RBP9.45□□□□□ -0.9
NPC1-208ENST00000590301 FAM83AQ86UY5 434 aa9.45□□□□□ -0.9
NPC1-208ENST00000590301 TDRD3Q9H7E2 651 aaKnown RBP9.45□□□□□ -0.9
NPC1-208ENST00000590301 IQSEC3Q9UPP2 1182 aaPredicted RBP9.45□□□□□ -0.9
NPC1-208ENST00000590301 PCDHAC2Q9Y5I4 1007 aa9.45□□□□□ -0.9
NPC1-208ENST00000590301 LRRFIP2Q9Y608 721 aaKnown RBP9.45□□□□□ -0.9
NPC1-208ENST00000590301 CCDC85CA6NKD9 419 aa9.44□□□□□ -0.9
NPC1-208ENST00000590301 OTUD7BQ6GQQ9 843 aa9.44□□□□□ -0.9
NPC1-208ENST00000590301 ATF7IPQ6VMQ6 1270 aa9.44□□□□□ -0.9
NPC1-208ENST00000590301 SPOCK2Q92563 424 aa9.44□□□□□ -0.9
NPC1-208ENST00000590301 WNK4Q96J92 1243 aa9.44□□□□□ -0.9
NPC1-208ENST00000590301 MEIS3Q99687 375 aa9.44□□□□□ -0.9
NPC1-208ENST00000590301 AKAP2Q9Y2D5 859 aa9.44□□□□□ -0.9
NPC1-208ENST00000590301 SSC5DA1L4H1 1573 aa9.44□□□□□ -0.9
NPC1-208ENST00000590301 AOX1Q06278 1338 aa9.43□□□□□ -0.9
NPC1-208ENST00000590301 PDS5AQ29RF7 1337 aaKnown RBP9.43□□□□□ -0.9
NPC1-208ENST00000590301 SALL1Q9NSC2 1324 aa9.43□□□□□ -0.9
NPC1-208ENST00000590301 GPR25O00155 361 aa9.43□□□□□ -0.9
NPC1-208ENST00000590301 USP2O75604 605 aaPredicted RBP9.43□□□□□ -0.9
NPC1-208ENST00000590301 RGS19P49795 217 aa9.43□□□□□ -0.9
NPC1-208ENST00000590301 APOBEC3HQ6NTF7 200 aaKnown RBP9.43□□□□□ -0.9
NPC1-208ENST00000590301 ZGPATQ8N5A5 531 aaKnown RBP9.43□□□□□ -0.9
NPC1-208ENST00000590301 TEPSINQ96N21 525 aa9.43□□□□□ -0.9
NPC1-208ENST00000590301 SIL1Q9H173 461 aa9.43□□□□□ -0.9
NPC1-208ENST00000590301 DENND2AQ9ULE3 1009 aa9.43□□□□□ -0.9
NPC1-208ENST00000590301 ZNF646O15015 1829 aaPredicted RBP9.42□□□□□ -0.9
NPC1-208ENST00000590301 SPEF2Q9C093 1822 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 RPAP1Q9BWH6 1393 aaPredicted RBP9.42□□□□□ -0.9
NPC1-208ENST00000590301 TCP10L2B9ZVM9 353 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 SRGAP3O43295 1099 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 TBC1D8O95759 1140 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 GNAI2P04899 355 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 LDHBP07195 334 aaKnown RBP9.42□□□□□ -0.9
NPC1-208ENST00000590301 TRIM27P14373 513 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 MAP3K9P80192 1104 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 MKRN3Q13064 507 aaKnown RBP9.42□□□□□ -0.9
NPC1-208ENST00000590301 MVPQ14764 893 aaKnown RBP9.42□□□□□ -0.9
NPC1-208ENST00000590301 GRIK5Q16478 980 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 DCAF15Q66K64 600 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 IFNL1Q8IU54 200 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 ZNF296Q8WUU4 475 aaPredicted RBP9.42□□□□□ -0.9
NPC1-208ENST00000590301 CLMNQ96JQ2 1002 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 TMEM39BQ9GZU3 492 aa9.42□□□□□ -0.9
NPC1-208ENST00000590301 CSADQ9Y600 493 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms