RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 VEZTQ9HBM0 779 aa26.48■■□□□ 1.83
LRP3-202ENST00000590275 PRDX5P30044 214 aa26.47■■□□□ 1.83
LRP3-202ENST00000590275 COG6Q9Y2V7 657 aa26.47■■□□□ 1.83
LRP3-202ENST00000590275 PAPPA2Q9BXP8 1791 aa26.46■■□□□ 1.83
LRP3-202ENST00000590275 MAP2K2P36507 400 aa26.46■■□□□ 1.83
LRP3-202ENST00000590275 RASGRF1Q13972 1273 aa26.46■■□□□ 1.83
LRP3-202ENST00000590275 PRKG1Q13976 671 aa26.46■■□□□ 1.83
LRP3-202ENST00000590275 APOBEC3HQ6NTF7 200 aaKnown RBP26.46■■□□□ 1.83
LRP3-202ENST00000590275 ZNF157P51786 506 aaPredicted RBP26.45■■□□□ 1.82
LRP3-202ENST00000590275 CACNB3P54284 484 aa26.45■■□□□ 1.82
LRP3-202ENST00000590275 G3BP1Q13283 466 aaKnown RBP eCLIP26.45■■□□□ 1.82
LRP3-202ENST00000590275 RASA3Q14644 834 aa26.45■■□□□ 1.82
LRP3-202ENST00000590275 NBPF12Q5TAG4 269 aaPredicted RBP26.45■■□□□ 1.82
LRP3-202ENST00000590275 RASAL3Q86YV0 1011 aa26.45■■□□□ 1.82
LRP3-202ENST00000590275 WDR66Q8TBY9 1149 aa26.45■■□□□ 1.82
LRP3-202ENST00000590275 ZBTB22O15209 634 aa26.44■■□□□ 1.82
LRP3-202ENST00000590275 SLC10A3P09131 477 aa26.44■■□□□ 1.82
LRP3-202ENST00000590275 FKBP1BP68106 108 aa26.44■■□□□ 1.82
LRP3-202ENST00000590275 HDLBPQ00341 1268 aaKnown RBP26.44■■□□□ 1.82
LRP3-202ENST00000590275 MVPQ14764 893 aaKnown RBP26.44■■□□□ 1.82
LRP3-202ENST00000590275 DIXDC1Q155Q3 683 aa26.44■■□□□ 1.82
LRP3-202ENST00000590275 NOP58Q9Y2X3 529 aaKnown RBP26.44■■□□□ 1.82
LRP3-202ENST00000590275 HSPA8P11142 646 aaKnown RBP26.43■■□□□ 1.82
LRP3-202ENST00000590275 MAP2K1Q02750 393 aaPredicted RBP26.43■■□□□ 1.82
LRP3-202ENST00000590275 PI16Q6UXB8 463 aa26.43■■□□□ 1.82
LRP3-202ENST00000590275 TEKT1Q969V4 418 aa26.43■■□□□ 1.82
LRP3-202ENST00000590275 ZDHHC15Q96MV8 337 aa26.43■■□□□ 1.82
LRP3-202ENST00000590275 TEPSINQ96N21 525 aa26.43■■□□□ 1.82
LRP3-202ENST00000590275 NEUROD6Q96NK8 337 aa26.43■■□□□ 1.82
LRP3-202ENST00000590275 MRIQ9BWK5 157 aa26.43■■□□□ 1.82
LRP3-202ENST00000590275 AKAP2Q9Y2D5 859 aa26.43■■□□□ 1.82
LRP3-202ENST00000590275 SUGT1Q9Y2Z0 365 aa26.43■■□□□ 1.82
LRP3-202ENST00000590275 TCP10L2B9ZVM9 353 aa26.42■■□□□ 1.82
LRP3-202ENST00000590275 MYO1BO43795 1136 aa26.42■■□□□ 1.82
LRP3-202ENST00000590275 SURF6O75683 361 aaKnown RBP26.42■■□□□ 1.82
LRP3-202ENST00000590275 SIRT2Q8IXJ6 389 aa26.42■■□□□ 1.82
LRP3-202ENST00000590275 TSKSQ9UJT2 592 aa26.42■■□□□ 1.82
LRP3-202ENST00000590275 DENND2AQ9ULE3 1009 aa26.42■■□□□ 1.82
LRP3-202ENST00000590275 SALL1Q9NSC2 1324 aa26.41■■□□□ 1.82
LRP3-202ENST00000590275 KIF23Q02241 960 aaPredicted RBP26.41■■□□□ 1.82
LRP3-202ENST00000590275 NOGQ13253 232 aa26.41■■□□□ 1.82
LRP3-202ENST00000590275 ZBTB40Q9NUA8 1239 aa26.41■■□□□ 1.82
LRP3-202ENST00000590275 GNL3LQ9NVN8 582 aaKnown RBP26.41■■□□□ 1.82
LRP3-202ENST00000590275 ECM29Q5VYK3 1845 aa26.41■■□□□ 1.82
LRP3-202ENST00000590275 SEMA3EO15041 775 aa26.4■■□□□ 1.82
LRP3-202ENST00000590275 LBX1P52954 281 aa26.4■■□□□ 1.82
LRP3-202ENST00000590275 LDLRAD1Q5T700 205 aa26.4■■□□□ 1.82
LRP3-202ENST00000590275 HHIPL2Q6UWX4 724 aa26.4■■□□□ 1.82
LRP3-202ENST00000590275 TMEM39BQ9GZU3 492 aa26.4■■□□□ 1.82
LRP3-202ENST00000590275 DAGLAQ9Y4D2 1042 aa26.4■■□□□ 1.82
LRP3-202ENST00000590275 PPP2R3BQ9Y5P8 575 aa26.4■■□□□ 1.82
LRP3-202ENST00000590275 TTLL12Q14166 644 aaPredicted RBP26.39■■□□□ 1.82
LRP3-202ENST00000590275 TNNI3KQ59H18 835 aa26.39■■□□□ 1.82
LRP3-202ENST00000590275 ZNF384Q8TF68 577 aa26.39■■□□□ 1.82
LRP3-202ENST00000590275 CCDC102AQ96A19 550 aa26.39■■□□□ 1.82
LRP3-202ENST00000590275 AIDAQ96BJ3 306 aa26.39■■□□□ 1.82
LRP3-202ENST00000590275 HMG20BQ9P0W2 317 aa26.39■■□□□ 1.82
LRP3-202ENST00000590275 FPGT-TNNI3KV9GXZ4 949 aa26.39■■□□□ 1.82
LRP3-202ENST00000590275 CTCFP49711 727 aaPredicted RBP26.38■■□□□ 1.81
LRP3-202ENST00000590275 DBNDD2Q9BQY9 259 aa26.38■■□□□ 1.81
LRP3-202ENST00000590275 TLR7Q9NYK1 1049 aaKnown RBP26.38■■□□□ 1.81
LRP3-202ENST00000590275 ANGEL1Q9UNK9 670 aaKnown RBP26.38■■□□□ 1.81
LRP3-202ENST00000590275 CLMNQ96JQ2 1002 aa26.37■■□□□ 1.81
LRP3-202ENST00000590275 CSRNP1Q96S65 589 aa26.37■■□□□ 1.81
LRP3-202ENST00000590275 EXOC6BQ9Y2D4 811 aa26.37■■□□□ 1.81
LRP3-202ENST00000590275 PDS5AQ29RF7 1337 aaKnown RBP26.37■■□□□ 1.81
LRP3-202ENST00000590275 USP2O75604 605 aaPredicted RBP26.36■■□□□ 1.81
LRP3-202ENST00000590275 LDHBP07195 334 aaKnown RBP26.36■■□□□ 1.81
LRP3-202ENST00000590275 MS4A1P11836 297 aa26.36■■□□□ 1.81
LRP3-202ENST00000590275 ARID4AP29374 1257 aaPredicted RBP26.36■■□□□ 1.81
LRP3-202ENST00000590275 NF2P35240 595 aa26.36■■□□□ 1.81
LRP3-202ENST00000590275 MCAMP43121 646 aa26.36■■□□□ 1.81
LRP3-202ENST00000590275 MAP3K11Q16584 847 aa26.36■■□□□ 1.81
LRP3-202ENST00000590275 TBC1D9Q6ZT07 1266 aa26.36■■□□□ 1.81
LRP3-202ENST00000590275 GPR108Q9NPR9 543 aa26.36■■□□□ 1.81
LRP3-202ENST00000590275 MAST3O60307 1309 aa26.36■■□□□ 1.81
LRP3-202ENST00000590275 OS9Q13438 667 aaPredicted RBP26.35■■□□□ 1.81
LRP3-202ENST00000590275 CDC42EP5Q6NZY7 148 aa26.35■■□□□ 1.81
LRP3-202ENST00000590275 EAF2Q96CJ1 260 aaPredicted RBP26.35■■□□□ 1.81
LRP3-202ENST00000590275 DDX19BQ9UMR2 479 aa26.35■■□□□ 1.81
LRP3-202ENST00000590275 MYH13Q9UKX3 1938 aa26.34■■□□□ 1.81
LRP3-202ENST00000590275 MKRN3Q13064 507 aaKnown RBP26.34■■□□□ 1.81
LRP3-202ENST00000590275 ARMC9Q7Z3E5 817 aa26.34■■□□□ 1.81
LRP3-202ENST00000590275 YTHDC1Q96MU7 727 aaKnown RBP26.34■■□□□ 1.81
LRP3-202ENST00000590275 DBNLQ9UJU6 430 aaKnown RBP26.34■■□□□ 1.81
LRP3-202ENST00000590275 NFIAQ12857 509 aa26.33■■□□□ 1.81
LRP3-202ENST00000590275 SPATA5Q8NB90 893 aa26.33■■□□□ 1.81
LRP3-202ENST00000590275 CCDC8Q9H0W5 538 aaPredicted RBP26.33■■□□□ 1.81
LRP3-202ENST00000590275 PRDM10Q9NQV6 1147 aa26.33■■□□□ 1.81
LRP3-202ENST00000590275 ABCF2Q9UG63 623 aa26.33■■□□□ 1.81
LRP3-202ENST00000590275 TNFAIP1Q13829 316 aa26.32■■□□□ 1.8
LRP3-202ENST00000590275 PDE3AQ14432 1141 aa26.32■■□□□ 1.8
LRP3-202ENST00000590275 SUPT20HL1Q3ZLR7 823 aa26.32■■□□□ 1.8
LRP3-202ENST00000590275 GAKO14976 1311 aa26.32■■□□□ 1.8
LRP3-202ENST00000590275 GORABQ5T7V8 394 aa26.31■■□□□ 1.8
LRP3-202ENST00000590275 ZFPM1Q8IX07 1006 aa26.31■■□□□ 1.8
LRP3-202ENST00000590275 SNRKQ9NRH2 765 aa26.31■■□□□ 1.8
LRP3-202ENST00000590275 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.31■■□□□ 1.8
LRP3-202ENST00000590275 FAM198AQ9UFP1 575 aa26.31■■□□□ 1.8
LRP3-202ENST00000590275 GJA5P36382 358 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms