RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 GNAI2P04899 355 aa17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 ADORA1P30542 326 aa17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 NF2P35240 595 aa17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 TIMM10P62072 90 aa17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 MKRN3Q13064 507 aaKnown RBP17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 NBPF12Q5TAG4 269 aaPredicted RBP17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 DZIP1LQ8IYY4 767 aaKnown RBP17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 CSRNP1Q96S65 589 aa17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 ZNF70Q9UC06 446 aaPredicted RBP17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 SERPINA10Q9UK55 444 aa17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 ANGEL1Q9UNK9 670 aaKnown RBP17.09■□□□□ 0.33
NEDD4L-228ENST00000590248 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
NEDD4L-228ENST00000590248 RLBP1P12271 317 aa17.08■□□□□ 0.32
NEDD4L-228ENST00000590248 RASA3Q14644 834 aa17.08■□□□□ 0.32
NEDD4L-228ENST00000590248 TBC1D22AQ8WUA7 517 aa17.08■□□□□ 0.32
NEDD4L-228ENST00000590248 C1orf115Q9H7X2 142 aa17.08■□□□□ 0.32
NEDD4L-228ENST00000590248 TCP10L2B9ZVM9 353 aa17.07■□□□□ 0.32
NEDD4L-228ENST00000590248 PHKA1P46020 1223 aa17.07■□□□□ 0.32
NEDD4L-228ENST00000590248 TFCP2Q12800 502 aa17.07■□□□□ 0.32
NEDD4L-228ENST00000590248 MTX1Q13505 466 aa17.07■□□□□ 0.32
NEDD4L-228ENST00000590248 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
NEDD4L-228ENST00000590248 ARMC9Q7Z3E5 817 aa17.07■□□□□ 0.32
NEDD4L-228ENST00000590248 CDAN1Q8IWY9 1227 aa17.07■□□□□ 0.32
NEDD4L-228ENST00000590248 SSC5DA1L4H1 1573 aa17.06■□□□□ 0.32
NEDD4L-228ENST00000590248 AK9Q5TCS8 1911 aa17.06■□□□□ 0.32
NEDD4L-228ENST00000590248 CACNB3P54284 484 aa17.06■□□□□ 0.32
NEDD4L-228ENST00000590248 MYH2Q9UKX2 1941 aa17.06■□□□□ 0.32
NEDD4L-228ENST00000590248 TRPA1O75762 1119 aa17.05■□□□□ 0.32
NEDD4L-228ENST00000590248 CCDC102BQ68D86 513 aa17.05■□□□□ 0.32
NEDD4L-228ENST00000590248 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
NEDD4L-228ENST00000590248 FTSJ3Q8IY81 847 aaKnown RBP17.05■□□□□ 0.32
NEDD4L-228ENST00000590248 TEKT1Q969V4 418 aa17.05■□□□□ 0.32
NEDD4L-228ENST00000590248 RNF186Q9NXI6 227 aa17.05■□□□□ 0.32
NEDD4L-228ENST00000590248 A0A1B0GUL7 405 aa17.04■□□□□ 0.32
NEDD4L-228ENST00000590248 LDLRAD1Q5T700 205 aa17.04■□□□□ 0.32
NEDD4L-228ENST00000590248 CLMNQ96JQ2 1002 aa17.04■□□□□ 0.32
NEDD4L-228ENST00000590248 TMEM39BQ9GZU3 492 aa17.04■□□□□ 0.32
NEDD4L-228ENST00000590248 PPP2R3BQ9Y5P8 575 aa17.04■□□□□ 0.32
NEDD4L-228ENST00000590248 ZBTB7BO15156 539 aaPredicted RBP17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 CA12O43570 354 aa17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 USP2O75604 605 aaPredicted RBP17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 PRDX5P30044 214 aa17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 HDLBPQ00341 1268 aaKnown RBP17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 APOBEC3HQ6NTF7 200 aaKnown RBP17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 WDR66Q8TBY9 1149 aa17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 XAGE2Q96GT9 111 aa17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 TEPSINQ96N21 525 aa17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 GNL3LQ9NVN8 582 aaKnown RBP17.03■□□□□ 0.32
NEDD4L-228ENST00000590248 PPP1R12BO60237 982 aaPredicted RBP17.02■□□□□ 0.32
NEDD4L-228ENST00000590248 G3BP1Q13283 466 aaKnown RBP eCLIP17.02■□□□□ 0.322e-6■□□□□ 9.7
NEDD4L-228ENST00000590248 DIXDC1Q155Q3 683 aa17.02■□□□□ 0.32
NEDD4L-228ENST00000590248 ZDHHC15Q96MV8 337 aa17.02■□□□□ 0.32
NEDD4L-228ENST00000590248 OTOFQ9HC10 1997 aa17.02■□□□□ 0.31
NEDD4L-228ENST00000590248 ATP8B2P98198 1209 aa17.01■□□□□ 0.31
NEDD4L-228ENST00000590248 TNFAIP1Q13829 316 aa17.01■□□□□ 0.31
NEDD4L-228ENST00000590248 HHIPL2Q6UWX4 724 aa17.01■□□□□ 0.31
NEDD4L-228ENST00000590248 SLC10A4Q96EP9 437 aa17.01■□□□□ 0.31
NEDD4L-228ENST00000590248 MRIQ9BWK5 157 aa17.01■□□□□ 0.31
NEDD4L-228ENST00000590248 DENND2AQ9ULE3 1009 aa17.01■□□□□ 0.31
NEDD4L-228ENST00000590248 SUGT1Q9Y2Z0 365 aa17.01■□□□□ 0.31
NEDD4L-228ENST00000590248 LDHBP07195 334 aaKnown RBP17■□□□□ 0.31
NEDD4L-228ENST00000590248 RASGRF1Q13972 1273 aa17■□□□□ 0.31
NEDD4L-228ENST00000590248 POLA2Q14181 598 aa17■□□□□ 0.31
NEDD4L-228ENST00000590248 MAP3K11Q16584 847 aa17■□□□□ 0.31
NEDD4L-228ENST00000590248 AKAP2Q9Y2D5 859 aa17■□□□□ 0.31
NEDD4L-228ENST00000590248 MAST3O60307 1309 aa16.99■□□□□ 0.31
NEDD4L-228ENST00000590248 TNNI2P48788 182 aa16.99■□□□□ 0.31
NEDD4L-228ENST00000590248 SPRYD7Q5W111 196 aa16.99■□□□□ 0.31
NEDD4L-228ENST00000590248 ABCF2Q9UG63 623 aa16.99■□□□□ 0.31
NEDD4L-228ENST00000590248 DAGLAQ9Y4D2 1042 aa16.99■□□□□ 0.31
NEDD4L-228ENST00000590248 SEMA3EO15041 775 aa16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 SURF6O75683 361 aaKnown RBP16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 IREB2P48200 963 aaKnown RBP16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 TM4SF4P48230 202 aa16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 REM2Q8IYK8 340 aaPredicted RBP16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 SSH3Q8TE77 659 aa16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 SAGE1Q9NXZ1 904 aa16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 TMOD2Q9NZR1 351 aa16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 MYO5AQ9Y4I1 1855 aaKnown RBP16.98■□□□□ 0.31
NEDD4L-228ENST00000590248 SALL1Q9NSC2 1324 aa16.97■□□□□ 0.31
NEDD4L-228ENST00000590248 TCP10Q12799 353 aa16.97■□□□□ 0.31
NEDD4L-228ENST00000590248 MVPQ14764 893 aaKnown RBP16.97■□□□□ 0.31
NEDD4L-228ENST00000590248 CDC42EP5Q6NZY7 148 aa16.97■□□□□ 0.31
NEDD4L-228ENST00000590248 PI16Q6UXB8 463 aa16.97■□□□□ 0.31
NEDD4L-228ENST00000590248 WNK4Q96J92 1243 aa16.97■□□□□ 0.31
NEDD4L-228ENST00000590248 ELP3Q9H9T3 547 aa16.97■□□□□ 0.31
NEDD4L-228ENST00000590248 GJA5P36382 358 aa16.96■□□□□ 0.31
NEDD4L-228ENST00000590248 NFIAQ12857 509 aa16.96■□□□□ 0.31
NEDD4L-228ENST00000590248 OS9Q13438 667 aaPredicted RBP16.96■□□□□ 0.31
NEDD4L-228ENST00000590248 GORABQ5T7V8 394 aa16.96■□□□□ 0.31
NEDD4L-228ENST00000590248 TBC1D9Q6ZT07 1266 aa16.96■□□□□ 0.31
NEDD4L-228ENST00000590248 ANKRD13AQ8IZ07 590 aa16.96■□□□□ 0.31
NEDD4L-228ENST00000590248 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.31
NEDD4L-228ENST00000590248 ABHD8Q96I13 439 aa16.96■□□□□ 0.31
NEDD4L-228ENST00000590248 USP40Q9NVE5 1235 aa16.96■□□□□ 0.31
NEDD4L-228ENST00000590248 HMG20BQ9P0W2 317 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms