RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 TDRD3Q9H7E2 651 aaKnown RBP17.93■□□□□ 0.46
MBD1-220ENST00000589758 ZNF70Q9UC06 446 aaPredicted RBP17.93■□□□□ 0.46
MBD1-220ENST00000589758 SUGT1Q9Y2Z0 365 aa17.93■□□□□ 0.46
MBD1-220ENST00000589758 IREB2P48200 963 aaKnown RBP17.92■□□□□ 0.46
MBD1-220ENST00000589758 TNNI2P48788 182 aa17.92■□□□□ 0.46
MBD1-220ENST00000589758 INHBEP58166 350 aa17.92■□□□□ 0.46
MBD1-220ENST00000589758 MKRN3Q13064 507 aaKnown RBP17.92■□□□□ 0.46
MBD1-220ENST00000589758 SPRYD7Q5W111 196 aa17.92■□□□□ 0.46
MBD1-220ENST00000589758 MRIQ9BWK5 157 aa17.92■□□□□ 0.46
MBD1-220ENST00000589758 MANSC4A6NHS7 340 aaPredicted RBP17.91■□□□□ 0.46
MBD1-220ENST00000589758 CIAO1O76071 339 aa17.91■□□□□ 0.46
MBD1-220ENST00000589758 ZBTB48P10074 688 aaPredicted RBP17.91■□□□□ 0.46
MBD1-220ENST00000589758 ATG9AQ7Z3C6 839 aa17.91■□□□□ 0.46
MBD1-220ENST00000589758 TEKT1Q969V4 418 aa17.91■□□□□ 0.46
MBD1-220ENST00000589758 FZD1Q9UP38 647 aa17.91■□□□□ 0.46
MBD1-220ENST00000589758 MAST3O60307 1309 aa17.91■□□□□ 0.46
MBD1-220ENST00000589758 AOX1Q06278 1338 aa17.91■□□□□ 0.46
MBD1-220ENST00000589758 SSC5DA1L4H1 1573 aa17.91■□□□□ 0.46
MBD1-220ENST00000589758 USP2O75604 605 aaPredicted RBP17.9■□□□□ 0.46
MBD1-220ENST00000589758 TBC1D8O95759 1140 aa17.9■□□□□ 0.46
MBD1-220ENST00000589758 ALDH1A1P00352 501 aa17.9■□□□□ 0.46
MBD1-220ENST00000589758 NOM1Q5C9Z4 860 aaKnown RBP17.9■□□□□ 0.46
MBD1-220ENST00000589758 CFHR5Q9BXR6 569 aa17.9■□□□□ 0.46
MBD1-220ENST00000589758 CEP126Q9P2H0 1117 aa17.9■□□□□ 0.46
MBD1-220ENST00000589758 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
MBD1-220ENST00000589758 SLC34A2O95436 690 aa17.89■□□□□ 0.45
MBD1-220ENST00000589758 IL15P40933 162 aaPredicted RBP17.89■□□□□ 0.45
MBD1-220ENST00000589758 GRIK5Q16478 980 aa17.89■□□□□ 0.45
MBD1-220ENST00000589758 INTS3Q68E01 1043 aaKnown RBP17.89■□□□□ 0.45
MBD1-220ENST00000589758 CTU1Q7Z7A3 348 aaKnown RBP17.89■□□□□ 0.45
MBD1-220ENST00000589758 ANKRD13AQ8IZ07 590 aa17.89■□□□□ 0.45
MBD1-220ENST00000589758 WDR66Q8TBY9 1149 aa17.89■□□□□ 0.45
MBD1-220ENST00000589758 WNK4Q96J92 1243 aa17.89■□□□□ 0.45
MBD1-220ENST00000589758 LRRFIP2Q9Y608 721 aaKnown RBP17.89■□□□□ 0.45
MBD1-220ENST00000589758 TCP10L2B9ZVM9 353 aa17.88■□□□□ 0.45
MBD1-220ENST00000589758 RGS19P49795 217 aa17.88■□□□□ 0.45
MBD1-220ENST00000589758 CLMNQ96JQ2 1002 aa17.88■□□□□ 0.45
MBD1-220ENST00000589758 ZDHHC15Q96MV8 337 aa17.88■□□□□ 0.45
MBD1-220ENST00000589758 SIL1Q9H173 461 aa17.88■□□□□ 0.45
MBD1-220ENST00000589758 TMOD2Q9NZR1 351 aa17.88■□□□□ 0.45
MBD1-220ENST00000589758 GPR25O00155 361 aa17.87■□□□□ 0.45
MBD1-220ENST00000589758 GNAI3P08754 354 aa17.87■□□□□ 0.45
MBD1-220ENST00000589758 PKN2Q16513 984 aaKnown RBP17.87■□□□□ 0.45
MBD1-220ENST00000589758 HHIPL2Q6UWX4 724 aa17.87■□□□□ 0.45
MBD1-220ENST00000589758 ZNF296Q8WUU4 475 aaPredicted RBP17.87■□□□□ 0.45
MBD1-220ENST00000589758 TEPSINQ96N21 525 aa17.87■□□□□ 0.45
MBD1-220ENST00000589758 MEIS3Q99687 375 aa17.87■□□□□ 0.45
MBD1-220ENST00000589758 COPRSQ9NQ92 184 aa17.87■□□□□ 0.45
MBD1-220ENST00000589758 GNL3LQ9NVN8 582 aaKnown RBP17.87■□□□□ 0.45
MBD1-220ENST00000589758 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.87■□□□□ 0.45
MBD1-220ENST00000589758 ATP2B3Q16720 1220 aa17.86■□□□□ 0.45
MBD1-220ENST00000589758 FKBP1CQ5VVH2 108 aa17.86■□□□□ 0.45
MBD1-220ENST00000589758 MYH13Q9UKX3 1938 aa17.86■□□□□ 0.45
MBD1-220ENST00000589758 LAMB1P07942 1786 aa17.85■□□□□ 0.45
MBD1-220ENST00000589758 OTUD7BQ6GQQ9 843 aa17.85■□□□□ 0.45
MBD1-220ENST00000589758 FAM83AQ86UY5 434 aa17.85■□□□□ 0.45
MBD1-220ENST00000589758 IFNL1Q8IU54 200 aa17.85■□□□□ 0.45
MBD1-220ENST00000589758 HOOK2Q96ED9 719 aa17.85■□□□□ 0.45
MBD1-220ENST00000589758 TMEM39BQ9GZU3 492 aa17.85■□□□□ 0.45
MBD1-220ENST00000589758 SEMA3EO15041 775 aa17.84■□□□□ 0.45
MBD1-220ENST00000589758 ZBTB22O15209 634 aa17.84■□□□□ 0.45
MBD1-220ENST00000589758 MLLT1Q03111 559 aaPredicted RBP17.84■□□□□ 0.45
MBD1-220ENST00000589758 APOBEC3HQ6NTF7 200 aaKnown RBP17.84■□□□□ 0.45
MBD1-220ENST00000589758 PA2G4Q9UQ80 394 aaKnown RBP17.84■□□□□ 0.45
MBD1-220ENST00000589758 FKTNO75072 461 aa17.83■□□□□ 0.44
MBD1-220ENST00000589758 MAP3K9P80192 1104 aa17.83■□□□□ 0.44
MBD1-220ENST00000589758 ATF7IPQ6VMQ6 1270 aa17.83■□□□□ 0.44
MBD1-220ENST00000589758 DENND2AQ9ULE3 1009 aa17.83■□□□□ 0.44
MBD1-220ENST00000589758 CSADQ9Y600 493 aa17.83■□□□□ 0.44
MBD1-220ENST00000589758 SRGAP3O43295 1099 aa17.82■□□□□ 0.44
MBD1-220ENST00000589758 MTX1Q13505 466 aa17.82■□□□□ 0.44
MBD1-220ENST00000589758 CDAN1Q8IWY9 1227 aa17.82■□□□□ 0.44
MBD1-220ENST00000589758 OPTNQ96CV9 577 aa17.82■□□□□ 0.44
MBD1-220ENST00000589758 ELP3Q9H9T3 547 aa17.82■□□□□ 0.44
MBD1-220ENST00000589758 SALL1Q9NSC2 1324 aa17.81■□□□□ 0.44
MBD1-220ENST00000589758 TESPA1A2RU30 521 aaPredicted RBP17.81■□□□□ 0.44
MBD1-220ENST00000589758 IGF2BP3O00425 579 aaKnown RBP eCLIP17.81■□□□□ 0.44
MBD1-220ENST00000589758 LDHBP07195 334 aaKnown RBP17.81■□□□□ 0.44
MBD1-220ENST00000589758 TRIM27P14373 513 aa17.81■□□□□ 0.44
MBD1-220ENST00000589758 GJA5P36382 358 aa17.81■□□□□ 0.44
MBD1-220ENST00000589758 CACNB3P54284 484 aa17.81■□□□□ 0.44
MBD1-220ENST00000589758 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.81■□□□□ 0.44
MBD1-220ENST00000589758 ZGPATQ8N5A5 531 aaKnown RBP17.81■□□□□ 0.44
MBD1-220ENST00000589758 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.81■□□□□ 0.44
MBD1-220ENST00000589758 FRAT1Q92837 279 aaPredicted RBP17.81■□□□□ 0.44
MBD1-220ENST00000589758 AKAP2Q9Y2D5 859 aa17.81■□□□□ 0.44
MBD1-220ENST00000589758 OTOFQ9HC10 1997 aa17.8■□□□□ 0.44
MBD1-220ENST00000589758 RPAP1Q9BWH6 1393 aaPredicted RBP17.8■□□□□ 0.44
MBD1-220ENST00000589758 BCAR3O75815 825 aa17.8■□□□□ 0.44
MBD1-220ENST00000589758 GNAI2P04899 355 aa17.8■□□□□ 0.44
MBD1-220ENST00000589758 PHKA1P46020 1223 aa17.8■□□□□ 0.44
MBD1-220ENST00000589758 VGLL4Q14135 290 aa17.8■□□□□ 0.44
MBD1-220ENST00000589758 DCAF15Q66K64 600 aa17.8■□□□□ 0.44
MBD1-220ENST00000589758 CCDC102BQ68D86 513 aa17.8■□□□□ 0.44
MBD1-220ENST00000589758 R3HDMLQ9H3Y0 253 aa17.8■□□□□ 0.44
MBD1-220ENST00000589758 PRDX5P30044 214 aa17.79■□□□□ 0.44
MBD1-220ENST00000589758 FAM151AQ8WW52 585 aa17.79■□□□□ 0.44
MBD1-220ENST00000589758 HPS5Q9UPZ3 1129 aa17.79■□□□□ 0.44
MBD1-220ENST00000589758 DAGLAQ9Y4D2 1042 aa17.79■□□□□ 0.44
MBD1-220ENST00000589758 GTF2A2P52657 109 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms