RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 GMPSP49915 693 aaPredicted RBP18.37■□□□□ 0.53
ATG4D-211ENST00000589753 MECOMQ03112 1051 aa18.37■□□□□ 0.53
ATG4D-211ENST00000589753 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
ATG4D-211ENST00000589753 SLC9C2Q5TAH2 1124 aa18.37■□□□□ 0.53
ATG4D-211ENST00000589753 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
ATG4D-211ENST00000589753 NSUN4Q96CB9 384 aaKnown RBP18.37■□□□□ 0.53
ATG4D-211ENST00000589753 MAST2Q6P0Q8 1798 aa18.37■□□□□ 0.53
ATG4D-211ENST00000589753 MYO5AQ9Y4I1 1855 aaKnown RBP18.37■□□□□ 0.53
ATG4D-211ENST00000589753 AK9Q5TCS8 1911 aa18.37■□□□□ 0.53
ATG4D-211ENST00000589753 GLTPD2A6NH11 291 aa18.36■□□□□ 0.53
ATG4D-211ENST00000589753 USP17L8P0C7I0 530 aa18.36■□□□□ 0.53
ATG4D-211ENST00000589753 GSTO1P78417 241 aa18.36■□□□□ 0.53
ATG4D-211ENST00000589753 RFX7Q2KHR2 1363 aa18.36■□□□□ 0.53
ATG4D-211ENST00000589753 TICAM2Q86XR7 235 aa18.36■□□□□ 0.53
ATG4D-211ENST00000589753 MAGEB6Q8N7X4 407 aa18.36■□□□□ 0.53
ATG4D-211ENST00000589753 DPF2Q92785 391 aa18.36■□□□□ 0.53
ATG4D-211ENST00000589753 HDAC9Q9UKV0 1011 aa18.36■□□□□ 0.53
ATG4D-211ENST00000589753 RNF113AO15541 343 aaKnown RBP18.35■□□□□ 0.53
ATG4D-211ENST00000589753 ZFYP08048 801 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-211ENST00000589753 PDE6AP16499 860 aa18.35■□□□□ 0.53
ATG4D-211ENST00000589753 ADD2P35612 726 aa18.35■□□□□ 0.53
ATG4D-211ENST00000589753 SCNN1DP51172 638 aa18.35■□□□□ 0.53
ATG4D-211ENST00000589753 NAA16Q6N069 864 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-211ENST00000589753 TMED8Q6PL24 325 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-211ENST00000589753 SLF2Q8IX21 1173 aa18.35■□□□□ 0.53
ATG4D-211ENST00000589753 OGFOD1Q8N543 542 aa18.35■□□□□ 0.53
ATG4D-211ENST00000589753 ZNF532Q9HCE3 1301 aa18.34■□□□□ 0.53
ATG4D-211ENST00000589753 MMP14P50281 582 aa18.34■□□□□ 0.53
ATG4D-211ENST00000589753 HDLBPQ00341 1268 aaKnown RBP18.34■□□□□ 0.53
ATG4D-211ENST00000589753 DIXDC1Q155Q3 683 aa18.34■□□□□ 0.53
ATG4D-211ENST00000589753 ZNF384Q8TF68 577 aa18.34■□□□□ 0.53
ATG4D-211ENST00000589753 MYH7P12883 1935 aa18.33■□□□□ 0.53
ATG4D-211ENST00000589753 HIP1O00291 1037 aa18.33■□□□□ 0.52
ATG4D-211ENST00000589753 LDHCP07864 332 aa18.33■□□□□ 0.52
ATG4D-211ENST00000589753 CYP7A1P22680 504 aa18.33■□□□□ 0.52
ATG4D-211ENST00000589753 UBE3CQ15386 1083 aa18.33■□□□□ 0.52
ATG4D-211ENST00000589753 MICALL2Q8IY33 904 aa18.33■□□□□ 0.52
ATG4D-211ENST00000589753 TEKT1Q969V4 418 aa18.33■□□□□ 0.52
ATG4D-211ENST00000589753 MRIQ9BWK5 157 aa18.33■□□□□ 0.52
ATG4D-211ENST00000589753 GPRC5DQ9NZD1 345 aa18.33■□□□□ 0.52
ATG4D-211ENST00000589753 CNOT7Q9UIV1 285 aaKnown RBP18.33■□□□□ 0.52
ATG4D-211ENST00000589753 SERPINA10Q9UK55 444 aa18.33■□□□□ 0.52
ATG4D-211ENST00000589753 MROH7-TTC4A0A0A0MT08 1334 aa18.32■□□□□ 0.52
ATG4D-211ENST00000589753 TCRBV5S4A2TA0A5A2 114 aa18.32■□□□□ 0.52
ATG4D-211ENST00000589753 CHGBP05060 677 aa18.32■□□□□ 0.52
ATG4D-211ENST00000589753 LMOD1P29536 600 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-211ENST00000589753 CRKP46108 304 aa18.32■□□□□ 0.52
ATG4D-211ENST00000589753 ZNF280AP59817 542 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-211ENST00000589753 SLFNL1Q499Z3 407 aa18.32■□□□□ 0.52
ATG4D-211ENST00000589753 HHIPL2Q6UWX4 724 aa18.32■□□□□ 0.52
ATG4D-211ENST00000589753 L3MBTL3Q96JM7 780 aaPredicted RBP18.32■□□□□ 0.52
ATG4D-211ENST00000589753 DIAPH3Q9NSV4 1193 aa18.32■□□□□ 0.52
ATG4D-211ENST00000589753 GAKO14976 1311 aa18.31■□□□□ 0.52
ATG4D-211ENST00000589753 SHTN1A0MZ66 631 aa18.31■□□□□ 0.52
ATG4D-211ENST00000589753 H7C1D1 291 aa18.31■□□□□ 0.52
ATG4D-211ENST00000589753 CDC45O75419 566 aa18.31■□□□□ 0.52
ATG4D-211ENST00000589753 RBM5P52756 815 aaKnown RBP eCLIP18.31■□□□□ 0.52
ATG4D-211ENST00000589753 ADGRA1Q86SQ6 560 aa18.31■□□□□ 0.52
ATG4D-211ENST00000589753 APPBP2Q92624 585 aa18.31■□□□□ 0.52
ATG4D-211ENST00000589753 FAM163AQ96GL9 167 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-211ENST00000589753 DAGLAQ9Y4D2 1042 aa18.31■□□□□ 0.52
ATG4D-211ENST00000589753 MYH2Q9UKX2 1941 aa18.3■□□□□ 0.52
ATG4D-211ENST00000589753 CHMLP26374 656 aa18.3■□□□□ 0.52
ATG4D-211ENST00000589753 NMIQ13287 307 aaPredicted RBP18.3■□□□□ 0.52
ATG4D-211ENST00000589753 CFAP100Q494V2 611 aa18.3■□□□□ 0.52
ATG4D-211ENST00000589753 ZMYM1Q5SVZ6 1142 aa18.3■□□□□ 0.52
ATG4D-211ENST00000589753 ZDHHC15Q96MV8 337 aa18.3■□□□□ 0.52
ATG4D-211ENST00000589753 MYOZ2Q9NPC6 264 aa18.3■□□□□ 0.52
ATG4D-211ENST00000589753 UTRNP46939 3433 aa18.3■□□□□ 0.52
ATG4D-211ENST00000589753 ADAMTSL1Q8N6G6 1762 aa18.3■□□□□ 0.52
ATG4D-211ENST00000589753 EPS15P42566 896 aa18.29■□□□□ 0.52
ATG4D-211ENST00000589753 DLGAP5Q15398 846 aa18.29■□□□□ 0.52
ATG4D-211ENST00000589753 CASC1Q6TDU7 716 aa18.29■□□□□ 0.52
ATG4D-211ENST00000589753 FAM227BQ96M60 508 aa18.29■□□□□ 0.52
ATG4D-211ENST00000589753 NOL10Q9BSC4 688 aaKnown RBP18.29■□□□□ 0.52
ATG4D-211ENST00000589753 HELLSQ9NRZ9 838 aa18.29■□□□□ 0.52
ATG4D-211ENST00000589753 WDR90Q96KV7 1748 aa18.29■□□□□ 0.52
ATG4D-211ENST00000589753 GPR75-ASB3A0A0A6YYF3 556 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 BAG3O95817 575 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 BTDP43251 543 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 CWC27Q6UX04 472 aaKnown RBP18.28■□□□□ 0.52
ATG4D-211ENST00000589753 SAMD7Q7Z3H4 446 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 MIGA1Q8NAN2 632 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 MTMR14Q8NCE2 650 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 RUFY2Q8WXA3 655 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 OSBP2Q969R2 916 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 SEC62Q99442 399 aaKnown RBP18.28■□□□□ 0.52
ATG4D-211ENST00000589753 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
ATG4D-211ENST00000589753 HACL1Q9UJ83 578 aa18.28■□□□□ 0.52
ATG4D-211ENST00000589753 MAGEB6P1A0A0J9YX57 407 aa18.27■□□□□ 0.52
ATG4D-211ENST00000589753 IQCA1LA6NCM1 817 aa18.27■□□□□ 0.52
ATG4D-211ENST00000589753 SPDYE2BA6NHP3 402 aa18.27■□□□□ 0.52
ATG4D-211ENST00000589753 SPDYE6P0CI01 402 aa18.27■□□□□ 0.52
ATG4D-211ENST00000589753 KIF4BQ2VIQ3 1234 aa18.27■□□□□ 0.52
ATG4D-211ENST00000589753 MCMDC2Q4G0Z9 681 aa18.27■□□□□ 0.52
ATG4D-211ENST00000589753 TBC1D10BQ4KMP7 808 aaPredicted RBP18.27■□□□□ 0.52
ATG4D-211ENST00000589753 RBM26Q5T8P6 1007 aaKnown RBP18.27■□□□□ 0.52
ATG4D-211ENST00000589753 APOBEC3HQ6NTF7 200 aaKnown RBP18.27■□□□□ 0.52
ATG4D-211ENST00000589753 AATFQ9NY61 560 aaKnown RBP eCLIP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms