RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 PRR5LQ6MZQ0 368 aa7.43□□□□□ -1.22
LINC01539-202ENST00000589293 CCDC116Q8IYX3 515 aa7.43□□□□□ -1.22
LINC01539-202ENST00000589293 CCDC97Q96F63 343 aaPredicted RBP7.43□□□□□ -1.22
LINC01539-202ENST00000589293 MASTLQ96GX5 879 aa7.43□□□□□ -1.22
LINC01539-202ENST00000589293 TMX4Q9H1E5 349 aaPredicted RBP7.43□□□□□ -1.22
LINC01539-202ENST00000589293 PCDHB11Q9Y5F2 797 aa7.43□□□□□ -1.22
LINC01539-202ENST00000589293 KIF7Q2M1P5 1343 aa7.43□□□□□ -1.22
LINC01539-202ENST00000589293 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.42□□□□□ -1.22
LINC01539-202ENST00000589293 TIMP2P16035 220 aa7.42□□□□□ -1.22
LINC01539-202ENST00000589293 ADD1P35611 737 aaKnown RBP7.42□□□□□ -1.22
LINC01539-202ENST00000589293 CCDC93Q567U6 631 aa7.42□□□□□ -1.22
LINC01539-202ENST00000589293 EAPPQ56P03 285 aaPredicted RBP7.42□□□□□ -1.22
LINC01539-202ENST00000589293 PRPF40BQ6NWY9 871 aaKnown RBP7.42□□□□□ -1.22
LINC01539-202ENST00000589293 TPTE2Q6XPS3 522 aa7.42□□□□□ -1.22
LINC01539-202ENST00000589293 PLEKHM2Q8IWE5 1019 aa7.42□□□□□ -1.22
LINC01539-202ENST00000589293 KDF1Q8NAX2 398 aaPredicted RBP7.42□□□□□ -1.22
LINC01539-202ENST00000589293 ZNF592Q92610 1267 aa7.42□□□□□ -1.22
LINC01539-202ENST00000589293 ITPKCQ96DU7 683 aa7.42□□□□□ -1.22
LINC01539-202ENST00000589293 ZFAND3Q9H8U3 227 aa7.42□□□□□ -1.22
LINC01539-202ENST00000589293 LTBP3Q9NS15 1303 aa7.42□□□□□ -1.22
LINC01539-202ENST00000589293 AFDNP55196 1824 aaKnown RBP7.41□□□□□ -1.22
LINC01539-202ENST00000589293 SBF1O95248 1867 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 A1BGP04217 495 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 SNRPA1P09661 255 aaKnown RBP7.41□□□□□ -1.22
LINC01539-202ENST00000589293 U2AF1L5P0DN76 240 aaPredicted RBP7.41□□□□□ -1.22
LINC01539-202ENST00000589293 NPR1P16066 1061 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 RFX1P22670 979 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 LMOD1P29536 600 aaPredicted RBP7.41□□□□□ -1.22
LINC01539-202ENST00000589293 ALDH1B1P30837 517 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 PRKAR2BP31323 418 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 PRELPP51888 382 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 ERVK-9P63128 1117 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 U2AF1Q01081 240 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC01539-202ENST00000589293 CLEC4GQ6UXB4 293 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 LDHDQ86WU2 507 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 RTKN2Q8IZC4 609 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 IL17REQ8NFR9 667 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 JDP2Q8WYK2 163 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 CYLDQ9NQC7 956 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 MKRN1Q9UHC7 482 aaKnown RBP7.41□□□□□ -1.22
LINC01539-202ENST00000589293 DOLKQ9UPQ8 538 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 WASF2Q9Y6W5 498 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 TIAM2Q8IVF5 1701 aa7.41□□□□□ -1.22
LINC01539-202ENST00000589293 FAM177BA6PVY3 158 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 GFRA3O60609 400 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 DDNO94850 711 aaPredicted RBP7.4□□□□□ -1.22
LINC01539-202ENST00000589293 CAMTA2O94983 1202 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 SRGNP10124 158 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 CBLBQ13191 982 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 OXLD1Q5BKU9 147 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 RNF20Q5VTR2 975 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 PNMA8AQ86V59 439 aaPredicted RBP7.4□□□□□ -1.22
LINC01539-202ENST00000589293 OSBPL3Q9H4L5 887 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 HACL1Q9UJ83 578 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 KIAA1024Q9UPX6 916 aa7.4□□□□□ -1.22
LINC01539-202ENST00000589293 NIP7Q9Y221 180 aaKnown RBP eCLIP7.4□□□□□ -1.22
LINC01539-202ENST00000589293 NRXN2Q9P2S2 1712 aa7.4□□□□□ -1.23
LINC01539-202ENST00000589293 DLEC1Q9Y238 1755 aa7.4□□□□□ -1.23
LINC01539-202ENST00000589293 ADAMTS7Q9UKP4 1686 aa7.39□□□□□ -1.23
LINC01539-202ENST00000589293 TMEM88BA6NKF7 163 aa7.39□□□□□ -1.23
LINC01539-202ENST00000589293 LCE2BO14633 110 aa7.39□□□□□ -1.23
LINC01539-202ENST00000589293 DKK1O94907 266 aa7.39□□□□□ -1.23
LINC01539-202ENST00000589293 STAU1O95793 577 aaKnown RBP7.39□□□□□ -1.23
LINC01539-202ENST00000589293 AVPP01185 164 aa7.39□□□□□ -1.23
LINC01539-202ENST00000589293 EIF6P56537 245 aaKnown RBP7.39□□□□□ -1.23
LINC01539-202ENST00000589293 CLDN10P78369 228 aa7.39□□□□□ -1.23
LINC01539-202ENST00000589293 FKBP4Q02790 459 aaKnown RBP eCLIP7.39□□□□□ -1.23
LINC01539-202ENST00000589293 MAP7D1Q3KQU3 841 aa7.39□□□□□ -1.23
LINC01539-202ENST00000589293 KIF6Q6ZMV9 814 aa7.39□□□□□ -1.23
LINC01539-202ENST00000589293 RPGRQ92834 1020 aaKnown RBP7.39□□□□□ -1.23
LINC01539-202ENST00000589293 NYXQ9GZU5 481 aa7.39□□□□□ -1.23
LINC01539-202ENST00000589293 NPC1L1Q9UHC9 1359 aa7.38□□□□□ -1.23
LINC01539-202ENST00000589293 FAM187AA6NFU0 413 aa7.38□□□□□ -1.23
LINC01539-202ENST00000589293 NRG2O14511 850 aaPredicted RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 ZIC2O95409 532 aaPredicted RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 PIP4K2AP48426 406 aaPredicted RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 CTCFP49711 727 aaPredicted RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 WDR4P57081 412 aaKnown RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 PNISRQ8TF01 805 aaKnown RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 TAF1DQ9H5J8 278 aaPredicted RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 ZNF277Q9NRM2 450 aaPredicted RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 ABT1Q9ULW3 272 aaKnown RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 PCDHGA11Q9Y5H2 935 aa7.38□□□□□ -1.23
LINC01539-202ENST00000589293 USP16Q9Y5T5 823 aa7.38□□□□□ -1.23
LINC01539-202ENST00000589293 CCDC88AQ3V6T2 1871 aa7.38□□□□□ -1.23
LINC01539-202ENST00000589293 VIRMAQ69YN4 1812 aaKnown RBP7.38□□□□□ -1.23
LINC01539-202ENST00000589293 UBR2Q8IWV8 1755 aa7.38□□□□□ -1.23
LINC01539-202ENST00000589293 SCN7AQ01118 1682 aa7.38□□□□□ -1.23
LINC01539-202ENST00000589293 POTECB2RU33 542 aa7.37□□□□□ -1.23
LINC01539-202ENST00000589293 ZBTB7BO15156 539 aaPredicted RBP7.37□□□□□ -1.23
LINC01539-202ENST00000589293 HTATSF1O43719 755 aaKnown RBP7.37□□□□□ -1.23
LINC01539-202ENST00000589293 EPHX2P34913 555 aa7.37□□□□□ -1.23
LINC01539-202ENST00000589293 IARSP41252 1262 aaKnown RBP7.37□□□□□ -1.23
LINC01539-202ENST00000589293 DHX9Q08211 1270 aaKnown RBP7.37□□□□□ -1.23
LINC01539-202ENST00000589293 TAF7Q15545 349 aaPredicted RBP7.37□□□□□ -1.23
LINC01539-202ENST00000589293 CRTC2Q53ET0 693 aaPredicted RBP7.37□□□□□ -1.23
LINC01539-202ENST00000589293 CC2D2BQ6DHV5 1058 aa7.37□□□□□ -1.23
LINC01539-202ENST00000589293 Q6ZVU0 165 aa7.37□□□□□ -1.23
LINC01539-202ENST00000589293 MCM10Q7L590 875 aa7.37□□□□□ -1.23
LINC01539-202ENST00000589293 NGEFQ8N5V2 710 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms