RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 ARHGAP27Q6ZUM4 889 aa29.79■■■□□ 2.36
RFX1-205ENST00000589239 PUS7LQ9H0K6 701 aaKnown RBP29.79■■■□□ 2.36
RFX1-205ENST00000589239 HELLSQ9NRZ9 838 aa29.79■■■□□ 2.36
RFX1-205ENST00000589239 LDHBP07195 334 aaKnown RBP29.78■■■□□ 2.36
RFX1-205ENST00000589239 PRELPP51888 382 aa29.78■■■□□ 2.36
RFX1-205ENST00000589239 SPTY2D1Q68D10 685 aaPredicted RBP29.78■■■□□ 2.36
RFX1-205ENST00000589239 NSUN4Q96CB9 384 aaKnown RBP29.78■■■□□ 2.36
RFX1-205ENST00000589239 ANO2Q9NQ90 1003 aa29.78■■■□□ 2.36
RFX1-205ENST00000589239 MAST3O60307 1309 aa29.78■■■□□ 2.36
RFX1-205ENST00000589239 RAD50Q92878 1312 aa29.78■■■□□ 2.36
RFX1-205ENST00000589239 M0R2C6 588 aa29.77■■■□□ 2.36
RFX1-205ENST00000589239 NIM1KQ8IY84 436 aa29.77■■■□□ 2.36
RFX1-205ENST00000589239 CERS5Q8N5B7 392 aa29.77■■■□□ 2.36
RFX1-205ENST00000589239 REC8O95072 547 aa29.77■■■□□ 2.36
RFX1-205ENST00000589239 STRIP1Q5VSL9 837 aa29.77■■■□□ 2.36
RFX1-205ENST00000589239 ADGRA1Q86SQ6 560 aa29.77■■■□□ 2.36
RFX1-205ENST00000589239 NAA16Q6N069 864 aaPredicted RBP29.76■■■□□ 2.35
RFX1-205ENST00000589239 DZIP1Q86YF9 867 aaKnown RBP29.76■■■□□ 2.35
RFX1-205ENST00000589239 USP17L3A6NCW0 530 aa29.75■■■□□ 2.35
RFX1-205ENST00000589239 USP17L4A6NCW7 530 aa29.75■■■□□ 2.35
RFX1-205ENST00000589239 USP17L1Q7RTZ2 530 aa29.75■■■□□ 2.35
RFX1-205ENST00000589239 CYP7A1P22680 504 aa29.75■■■□□ 2.35
RFX1-205ENST00000589239 DACT2Q5SW24 774 aa29.75■■■□□ 2.35
RFX1-205ENST00000589239 JDP2Q8WYK2 163 aa29.75■■■□□ 2.35
RFX1-205ENST00000589239 UPF2Q9HAU5 1272 aaKnown RBP29.75■■■□□ 2.35
RFX1-205ENST00000589239 ZNRF3Q9ULT6 936 aa29.75■■■□□ 2.35
RFX1-205ENST00000589239 EIF5BO60841 1220 aaKnown RBP29.74■■■□□ 2.35
RFX1-205ENST00000589239 RAD17O75943 681 aa29.73■■■□□ 2.35
RFX1-205ENST00000589239 CCDC171Q6TFL3 1326 aa29.73■■■□□ 2.35
RFX1-205ENST00000589239 KIAA1211Q6ZU35 1233 aa29.72■■■□□ 2.35
RFX1-205ENST00000589239 MIGA1Q8NAN2 632 aa29.72■■■□□ 2.35
RFX1-205ENST00000589239 USP26Q9BXU7 913 aa29.72■■■□□ 2.35
RFX1-205ENST00000589239 LSG1Q9H089 658 aaKnown RBP29.72■■■□□ 2.35
RFX1-205ENST00000589239 F8W031 263 aaPredicted RBP29.72■■■□□ 2.35
RFX1-205ENST00000589239 DIXDC1Q155Q3 683 aa29.72■■■□□ 2.35
RFX1-205ENST00000589239 GPAA1O43292 621 aa29.71■■■□□ 2.35
RFX1-205ENST00000589239 PTH1RQ03431 593 aa29.71■■■□□ 2.35
RFX1-205ENST00000589239 AIDAQ96BJ3 306 aa29.7■■■□□ 2.35
RFX1-205ENST00000589239 SUGT1Q9Y2Z0 365 aa29.7■■■□□ 2.35
RFX1-205ENST00000589239 CCDC88AQ3V6T2 1871 aa29.69■■■□□ 2.34
RFX1-205ENST00000589239 VPS53Q5VIR6 699 aa29.69■■■□□ 2.34
RFX1-205ENST00000589239 MAST2Q6P0Q8 1798 aa29.69■■■□□ 2.34
RFX1-205ENST00000589239 ZNF646O15015 1829 aaPredicted RBP29.69■■■□□ 2.34
RFX1-205ENST00000589239 PSMD14O00487 310 aa29.69■■■□□ 2.34
RFX1-205ENST00000589239 MBD4O95243 580 aa29.69■■■□□ 2.34
RFX1-205ENST00000589239 FKBP1AP62942 108 aaKnown RBP29.69■■■□□ 2.34
RFX1-205ENST00000589239 C22orf23Q9BZE7 217 aa29.69■■■□□ 2.34
RFX1-205ENST00000589239 TTF2Q9UNY4 1162 aaKnown RBP29.69■■■□□ 2.34
RFX1-205ENST00000589239 IGSF3O75054 1194 aa29.68■■■□□ 2.34
RFX1-205ENST00000589239 CXCL9Q07325 125 aa29.68■■■□□ 2.34
RFX1-205ENST00000589239 KIAA0825Q8IV33 1275 aa29.68■■■□□ 2.34
RFX1-205ENST00000589239 ARMT1Q9H993 441 aa29.68■■■□□ 2.34
RFX1-205ENST00000589239 LMNB1P20700 586 aa29.67■■■□□ 2.34
RFX1-205ENST00000589239 GSTO1P78417 241 aa29.67■■■□□ 2.34
RFX1-205ENST00000589239 GPR162Q16538 588 aa29.67■■■□□ 2.34
RFX1-205ENST00000589239 LCORLQ8N3X6 602 aa29.67■■■□□ 2.34
RFX1-205ENST00000589239 TMED8Q6PL24 325 aaPredicted RBP29.66■■■□□ 2.34
RFX1-205ENST00000589239 MAGEB6P1A0A0J9YX57 407 aa29.66■■■□□ 2.34
RFX1-205ENST00000589239 VIL1P09327 827 aaKnown RBP29.66■■■□□ 2.34
RFX1-205ENST00000589239 TBC1D32Q96NH3 1257 aa29.66■■■□□ 2.34
RFX1-205ENST00000589239 STRBPQ96SI9 672 aaKnown RBP29.66■■■□□ 2.34
RFX1-205ENST00000589239 AATFQ9NY61 560 aaKnown RBP eCLIP29.66■■■□□ 2.34
RFX1-205ENST00000589239 HSPD1P10809 573 aaKnown RBP29.65■■■□□ 2.34
RFX1-205ENST00000589239 DYNLL1P63167 89 aaKnown RBP29.65■■■□□ 2.34
RFX1-205ENST00000589239 RSBN1LQ6PCB5 846 aaPredicted RBP29.65■■■□□ 2.34
RFX1-205ENST00000589239 RIOK1Q9BRS2 568 aaKnown RBP29.65■■■□□ 2.34
RFX1-205ENST00000589239 PSME4Q14997 1843 aa29.65■■■□□ 2.34
RFX1-205ENST00000589239 SCNN1DP51172 638 aa29.65■■■□□ 2.34
RFX1-205ENST00000589239 MAP4K1Q92918 833 aa29.65■■■□□ 2.34
RFX1-205ENST00000589239 MROH7-TTC4A0A0A0MT08 1334 aa29.64■■■□□ 2.34
RFX1-205ENST00000589239 ZBTB12Q9Y330 459 aaPredicted RBP29.64■■■□□ 2.34
RFX1-205ENST00000589239 FZD9O00144 591 aa29.63■■■□□ 2.33
RFX1-205ENST00000589239 FOXP2O15409 715 aa29.63■■■□□ 2.33
RFX1-205ENST00000589239 CIAPIN1Q6FI81 312 aa29.63■■■□□ 2.33
RFX1-205ENST00000589239 LDHCP07864 332 aa29.63■■■□□ 2.33
RFX1-205ENST00000589239 MYH2Q9UKX2 1941 aa29.62■■■□□ 2.33
RFX1-205ENST00000589239 EPB41L2O43491 1005 aaKnown RBP29.62■■■□□ 2.33
RFX1-205ENST00000589239 SLF2Q8IX21 1173 aa29.62■■■□□ 2.33
RFX1-205ENST00000589239 RBM8AQ9Y5S9 174 aaKnown RBP29.62■■■□□ 2.33
RFX1-205ENST00000589239 MYO3BQ8WXR4 1341 aa29.61■■■□□ 2.33
RFX1-205ENST00000589239 PRKAB2O43741 272 aa29.61■■■□□ 2.33
RFX1-205ENST00000589239 FAM163AQ96GL9 167 aaPredicted RBP29.61■■■□□ 2.33
RFX1-205ENST00000589239 DSCC1Q9BVC3 393 aa29.61■■■□□ 2.33
RFX1-205ENST00000589239 GAKO14976 1311 aa29.61■■■□□ 2.33
RFX1-205ENST00000589239 RBM25P49756 843 aaKnown RBP29.6■■■□□ 2.33
RFX1-205ENST00000589239 DAGLAQ9Y4D2 1042 aa29.6■■■□□ 2.33
RFX1-205ENST00000589239 EIF6P56537 245 aaKnown RBP29.6■■■□□ 2.33
RFX1-205ENST00000589239 GMLQ99445 158 aa29.6■■■□□ 2.33
RFX1-205ENST00000589239 SLC4A4Q9Y6R1 1079 aa29.6■■■□□ 2.33
RFX1-205ENST00000589239 SBF1O95248 1867 aa29.6■■■□□ 2.33
RFX1-205ENST00000589239 BTDP43251 543 aa29.59■■■□□ 2.33
RFX1-205ENST00000589239 GPR75-ASB3A0A0A6YYF3 556 aa29.59■■■□□ 2.33
RFX1-205ENST00000589239 TNIP1Q15025 636 aa29.59■■■□□ 2.33
RFX1-205ENST00000589239 TEKT1Q969V4 418 aa29.59■■■□□ 2.33
RFX1-205ENST00000589239 BAG3O95817 575 aa29.58■■■□□ 2.33
RFX1-205ENST00000589239 APPP05067 770 aa29.58■■■□□ 2.33
RFX1-205ENST00000589239 HSPA4P34932 840 aa29.58■■■□□ 2.33
RFX1-205ENST00000589239 RNF181Q9P0P0 153 aa29.58■■■□□ 2.33
RFX1-205ENST00000589239 PALD1Q9ULE6 856 aa29.58■■■□□ 2.33
RFX1-205ENST00000589239 ZNF541Q9H0D2 1346 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms