RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 CHMP4AQ9BY43 222 aa19.24■□□□□ 0.67
SF3A2-204ENST00000589118 IQSEC3Q9UPP2 1182 aaPredicted RBP19.24■□□□□ 0.67
SF3A2-204ENST00000589118 UNCXA6NJT0 531 aa19.23■□□□□ 0.67
SF3A2-204ENST00000589118 H0YGN5 161 aa19.23■□□□□ 0.67
SF3A2-204ENST00000589118 MFSD14BQ5SR56 506 aa19.23■□□□□ 0.67
SF3A2-204ENST00000589118 WWC1Q8IX03 1113 aa19.23■□□□□ 0.67
SF3A2-204ENST00000589118 PUS3Q9BZE2 481 aaKnown RBP19.23■□□□□ 0.67
SF3A2-204ENST00000589118 FKBP1AP62942 108 aaKnown RBP19.22■□□□□ 0.67
SF3A2-204ENST00000589118 LDHAL6AQ6ZMR3 332 aa19.22■□□□□ 0.67
SF3A2-204ENST00000589118 DZIP1LQ8IYY4 767 aaKnown RBP19.22■□□□□ 0.67
SF3A2-204ENST00000589118 ZFYVE28Q9HCC9 887 aa19.22■□□□□ 0.67
SF3A2-204ENST00000589118 CNNM1Q9NRU3 951 aa19.22■□□□□ 0.67
SF3A2-204ENST00000589118 ARAP2Q8WZ64 1704 aa19.22■□□□□ 0.67
SF3A2-204ENST00000589118 CEP290O15078 2479 aa19.21■□□□□ 0.67
SF3A2-204ENST00000589118 MAP3K9P80192 1104 aa19.21■□□□□ 0.67
SF3A2-204ENST00000589118 TDRD7Q8NHU6 1098 aaKnown RBP19.21■□□□□ 0.67
SF3A2-204ENST00000589118 FAM84BQ96KN1 310 aaPredicted RBP19.21■□□□□ 0.67
SF3A2-204ENST00000589118 SALL2Q9Y467 1007 aaPredicted RBP19.21■□□□□ 0.67
SF3A2-204ENST00000589118 FAM205AQ6ZU69 1335 aa19.21■□□□□ 0.67
SF3A2-204ENST00000589118 CRKP46108 304 aa19.2■□□□□ 0.66
SF3A2-204ENST00000589118 BEND3Q5T5X7 828 aa19.2■□□□□ 0.66
SF3A2-204ENST00000589118 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.2■□□□□ 0.66
SF3A2-204ENST00000589118 VAMP4O75379 141 aa19.19■□□□□ 0.66
SF3A2-204ENST00000589118 CTGFP29279 349 aa19.19■□□□□ 0.66
SF3A2-204ENST00000589118 GTF2A2P52657 109 aa19.19■□□□□ 0.66
SF3A2-204ENST00000589118 CCDC57Q2TAC2 916 aa19.19■□□□□ 0.66
SF3A2-204ENST00000589118 TAF7LQ5H9L4 462 aa19.19■□□□□ 0.66
SF3A2-204ENST00000589118 ZKSCAN4Q969J2 545 aaPredicted RBP19.19■□□□□ 0.66
SF3A2-204ENST00000589118 TRIOBPQ9H2D6 2365 aa19.19■□□□□ 0.66
SF3A2-204ENST00000589118 HIBADHP31937 336 aaKnown RBP19.18■□□□□ 0.66
SF3A2-204ENST00000589118 CHAF1AQ13111 956 aaPredicted RBP19.18■□□□□ 0.66
SF3A2-204ENST00000589118 MTFR1Q15390 333 aa19.18■□□□□ 0.66
SF3A2-204ENST00000589118 NBPF11Q86T75 865 aa19.18■□□□□ 0.66
SF3A2-204ENST00000589118 SERPINA10Q9UK55 444 aa19.18■□□□□ 0.66
SF3A2-204ENST00000589118 SNCAIPQ9Y6H5 919 aa19.18■□□□□ 0.66
SF3A2-204ENST00000589118 CACNA1FO60840 1977 aa19.17■□□□□ 0.66
SF3A2-204ENST00000589118 BTBD19C9JJ37 291 aa19.17■□□□□ 0.66
SF3A2-204ENST00000589118 EXOSC9Q06265 439 aaKnown RBP19.17■□□□□ 0.66
SF3A2-204ENST00000589118 TNFAIP1Q13829 316 aa19.17■□□□□ 0.66
SF3A2-204ENST00000589118 CSADQ9Y600 493 aa19.17■□□□□ 0.66
SF3A2-204ENST00000589118 FANCIQ9NVI1 1328 aa19.17■□□□□ 0.66
SF3A2-204ENST00000589118 CHRDL2Q6WN34 429 aa19.16■□□□□ 0.66
SF3A2-204ENST00000589118 SZT2Q5T011 3432 aa19.15■□□□□ 0.66
SF3A2-204ENST00000589118 SPDYE5A6NIY4 337 aa19.15■□□□□ 0.66
SF3A2-204ENST00000589118 IRF6O14896 467 aa19.15■□□□□ 0.66
SF3A2-204ENST00000589118 TLR2O60603 784 aa19.15■□□□□ 0.66
SF3A2-204ENST00000589118 LACTBP83111 547 aaPredicted RBP19.15■□□□□ 0.66
SF3A2-204ENST00000589118 SHISA4Q96DD7 197 aa19.15■□□□□ 0.66
SF3A2-204ENST00000589118 KAZALD1Q96I82 304 aa19.15■□□□□ 0.66
SF3A2-204ENST00000589118 CPA4Q9UI42 421 aa19.15■□□□□ 0.66
SF3A2-204ENST00000589118 GRM8O00222 908 aa19.14■□□□□ 0.65
SF3A2-204ENST00000589118 TNNI2P48788 182 aa19.14■□□□□ 0.65
SF3A2-204ENST00000589118 CCDC27Q2M243 656 aa19.14■□□□□ 0.65
SF3A2-204ENST00000589118 MIGA2Q7L4E1 593 aa19.14■□□□□ 0.65
SF3A2-204ENST00000589118 SUCLG2Q96I99 432 aa19.14■□□□□ 0.65
SF3A2-204ENST00000589118 WRNIP1Q96S55 665 aa19.14■□□□□ 0.65
SF3A2-204ENST00000589118 UBE4AQ14139 1066 aa19.13■□□□□ 0.65
SF3A2-204ENST00000589118 ARHGEF6Q15052 776 aa19.13■□□□□ 0.65
SF3A2-204ENST00000589118 DPF3Q92784 378 aa19.13■□□□□ 0.65
SF3A2-204ENST00000589118 SPINK5Q9NQ38 1064 aaPredicted RBP19.13■□□□□ 0.65
SF3A2-204ENST00000589118 RBM27Q9P2N5 1060 aaKnown RBP19.13■□□□□ 0.65
SF3A2-204ENST00000589118 CETPP11597 493 aa19.12■□□□□ 0.65
SF3A2-204ENST00000589118 LRRC24Q50LG9 513 aa19.12■□□□□ 0.65
SF3A2-204ENST00000589118 SLC4A10Q6U841 1118 aa19.12■□□□□ 0.65
SF3A2-204ENST00000589118 ERO1BQ86YB8 467 aa19.12■□□□□ 0.65
SF3A2-204ENST00000589118 C9orf78Q9NZ63 289 aaPredicted RBP19.12■□□□□ 0.65
SF3A2-204ENST00000589118 RIPOR2Q9Y4F9 1068 aa19.12■□□□□ 0.65
SF3A2-204ENST00000589118 INPP5BP32019 993 aa19.11■□□□□ 0.65
SF3A2-204ENST00000589118 KIF22Q14807 665 aa19.11■□□□□ 0.65
SF3A2-204ENST00000589118 FBXO33Q7Z6M2 555 aa19.11■□□□□ 0.65
SF3A2-204ENST00000589118 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.11■□□□□ 0.65
SF3A2-204ENST00000589118 TRIM47Q96LD4 638 aa19.11■□□□□ 0.65
SF3A2-204ENST00000589118 AK9Q5TCS8 1911 aa19.1■□□□□ 0.65
SF3A2-204ENST00000589118 IL16Q14005 1332 aa19.1■□□□□ 0.65
SF3A2-204ENST00000589118 NBPF7P0C2Y1 421 aaPredicted RBP19.1■□□□□ 0.65
SF3A2-204ENST00000589118 BCAMP50895 628 aa19.1■□□□□ 0.65
SF3A2-204ENST00000589118 C17orf99Q6UX52 265 aa19.1■□□□□ 0.65
SF3A2-204ENST00000589118 KLHDC4Q8TBB5 520 aa19.1■□□□□ 0.65
SF3A2-204ENST00000589118 FRAT2O75474 233 aaPredicted RBP19.09■□□□□ 0.65
SF3A2-204ENST00000589118 PSMC4P43686 418 aa19.09■□□□□ 0.65
SF3A2-204ENST00000589118 SNAPC2Q13487 334 aa19.09■□□□□ 0.65
SF3A2-204ENST00000589118 APOBEC3HQ6NTF7 200 aaKnown RBP19.09■□□□□ 0.65
SF3A2-204ENST00000589118 VPS37DQ86XT2 251 aa19.09■□□□□ 0.65
SF3A2-204ENST00000589118 OSBPP22059 807 aa19.08■□□□□ 0.64
SF3A2-204ENST00000589118 PPIL2Q13356 520 aa19.08■□□□□ 0.64
SF3A2-204ENST00000589118 TEKT1Q969V4 418 aa19.08■□□□□ 0.64
SF3A2-204ENST00000589118 PDHXO00330 501 aa19.07■□□□□ 0.64
SF3A2-204ENST00000589118 FMNL1O95466 1100 aaPredicted RBP19.07■□□□□ 0.64
SF3A2-204ENST00000589118 SRRDQ9UH36 339 aa19.07■□□□□ 0.64
SF3A2-204ENST00000589118 MGAMO43451 1857 aa19.07■□□□□ 0.64
SF3A2-204ENST00000589118 WDHD1O75717 1129 aaPredicted RBP19.06■□□□□ 0.64
SF3A2-204ENST00000589118 CCL5P13501 91 aa19.06■□□□□ 0.64
SF3A2-204ENST00000589118 TCP10Q12799 353 aa19.06■□□□□ 0.64
SF3A2-204ENST00000589118 ZDHHC15Q96MV8 337 aa19.06■□□□□ 0.64
SF3A2-204ENST00000589118 SRCIN1Q9C0H9 1055 aa19.06■□□□□ 0.64
SF3A2-204ENST00000589118 BICC1Q9H694 974 aaKnown RBP19.06■□□□□ 0.64
SF3A2-204ENST00000589118 ADGRA2Q96PE1 1338 aa19.05■□□□□ 0.64
SF3A2-204ENST00000589118 GRK4P32298 578 aa19.05■□□□□ 0.64
SF3A2-204ENST00000589118 HDLBPQ00341 1268 aaKnown RBP19.05■□□□□ 0.64
SF3A2-204ENST00000589118 MOGSQ13724 837 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms