RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 TBC1D22AQ8WUA7 517 aa26.67■■□□□ 1.86
ATG4D-209ENST00000588857 AIDAQ96BJ3 306 aa26.67■■□□□ 1.86
ATG4D-209ENST00000588857 GPAA1O43292 621 aa26.66■■□□□ 1.86
ATG4D-209ENST00000588857 LDHBP07195 334 aaKnown RBP26.66■■□□□ 1.86
ATG4D-209ENST00000588857 PSMD1Q99460 953 aa26.66■■□□□ 1.86
ATG4D-209ENST00000588857 KIF2CQ99661 725 aa26.66■■□□□ 1.86
ATG4D-209ENST00000588857 DSCC1Q9BVC3 393 aa26.66■■□□□ 1.86
ATG4D-209ENST00000588857 U3KPZ7 1027 aaPredicted RBP26.66■■□□□ 1.86
ATG4D-209ENST00000588857 FAM205AQ6ZU69 1335 aa26.66■■□□□ 1.86
ATG4D-209ENST00000588857 ARFGEF1Q9Y6D6 1849 aa26.65■■□□□ 1.86
ATG4D-209ENST00000588857 PRDX5P30044 214 aa26.65■■□□□ 1.86
ATG4D-209ENST00000588857 PODNQ7Z5L7 613 aa26.65■■□□□ 1.86
ATG4D-209ENST00000588857 DZIP1Q86YF9 867 aaKnown RBP26.65■■□□□ 1.86
ATG4D-209ENST00000588857 GTF2IP78347 998 aa26.64■■□□□ 1.86
ATG4D-209ENST00000588857 MECOMQ03112 1051 aa26.64■■□□□ 1.86
ATG4D-209ENST00000588857 KIAA2012Q0VF49 1180 aa26.64■■□□□ 1.86
ATG4D-209ENST00000588857 C9orf131Q5VYM1 1079 aa26.64■■□□□ 1.86
ATG4D-209ENST00000588857 NSUN4Q96CB9 384 aaKnown RBP26.64■■□□□ 1.86
ATG4D-209ENST00000588857 HSPD1P10809 573 aaKnown RBP26.63■■□□□ 1.85
ATG4D-209ENST00000588857 NECTIN1Q15223 517 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 AOC3Q16853 763 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 VPS53Q5VIR6 699 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 RNF20Q5VTR2 975 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 FBXW7Q969H0 707 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 DBNDD1Q9H9R9 158 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 PALD1Q9ULE6 856 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 PPIP5K2O43314 1243 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 RABEP1Q15276 862 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 MFSD14BQ5SR56 506 aa26.63■■□□□ 1.85
ATG4D-209ENST00000588857 MBD4O95243 580 aa26.62■■□□□ 1.85
ATG4D-209ENST00000588857 ZKSCAN1P17029 563 aaPredicted RBP26.62■■□□□ 1.85
ATG4D-209ENST00000588857 TTLL5Q6EMB2 1281 aa26.62■■□□□ 1.85
ATG4D-209ENST00000588857 IPO9Q96P70 1041 aaKnown RBP26.62■■□□□ 1.85
ATG4D-209ENST00000588857 FER1L6Q2WGJ9 1857 aa26.61■■□□□ 1.85
ATG4D-209ENST00000588857 ECE2O60344 883 aa26.61■■□□□ 1.85
ATG4D-209ENST00000588857 GSTO1P78417 241 aa26.61■■□□□ 1.85
ATG4D-209ENST00000588857 RASSF7Q02833 373 aa26.61■■□□□ 1.85
ATG4D-209ENST00000588857 CREB3L3Q68CJ9 461 aa26.61■■□□□ 1.85
ATG4D-209ENST00000588857 STRBPQ96SI9 672 aaKnown RBP26.61■■□□□ 1.85
ATG4D-209ENST00000588857 MYH2Q9UKX2 1941 aa26.61■■□□□ 1.85
ATG4D-209ENST00000588857 MAGEB6P1A0A0J9YX57 407 aa26.6■■□□□ 1.85
ATG4D-209ENST00000588857 NFKBIEO00221 500 aa26.6■■□□□ 1.85
ATG4D-209ENST00000588857 MIGA1Q8NAN2 632 aa26.6■■□□□ 1.85
ATG4D-209ENST00000588857 ZNF384Q8TF68 577 aa26.6■■□□□ 1.85
ATG4D-209ENST00000588857 VPS33BQ9H267 617 aa26.6■■□□□ 1.85
ATG4D-209ENST00000588857 SNX14Q9Y5W7 946 aa26.6■■□□□ 1.85
ATG4D-209ENST00000588857 ADGRA1Q86SQ6 560 aa26.59■■□□□ 1.85
ATG4D-209ENST00000588857 KCNB2Q92953 911 aa26.59■■□□□ 1.85
ATG4D-209ENST00000588857 ARMT1Q9H993 441 aa26.59■■□□□ 1.85
ATG4D-209ENST00000588857 RNF181Q9P0P0 153 aa26.59■■□□□ 1.85
ATG4D-209ENST00000588857 CTNNA3Q9UI47 895 aa26.59■■□□□ 1.85
ATG4D-209ENST00000588857 SLC27A2O14975 620 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 GNAT2P19087 354 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 IL17RAQ96F46 866 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 SCN9AQ15858 1988 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 APPP05067 770 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 LDHCP07864 332 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 LMNB1P20700 586 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 BECN1Q14457 450 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 RASEFQ8IZ41 740 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 ZNF277Q9NRM2 450 aaPredicted RBP26.58■■□□□ 1.85
ATG4D-209ENST00000588857 SUGT1Q9Y2Z0 365 aa26.58■■□□□ 1.85
ATG4D-209ENST00000588857 PRELPP51888 382 aa26.57■■□□□ 1.84
ATG4D-209ENST00000588857 LCORLQ8N3X6 602 aa26.57■■□□□ 1.84
ATG4D-209ENST00000588857 LARGE2Q8N3Y3 721 aa26.57■■□□□ 1.84
ATG4D-209ENST00000588857 DAXXQ9UER7 740 aaPredicted RBP26.57■■□□□ 1.84
ATG4D-209ENST00000588857 GRIK5Q16478 980 aa26.56■■□□□ 1.84
ATG4D-209ENST00000588857 SLF2Q8IX21 1173 aa26.56■■□□□ 1.84
ATG4D-209ENST00000588857 ZNF526Q8TF50 670 aaPredicted RBP26.56■■□□□ 1.84
ATG4D-209ENST00000588857 TAOK3Q9H2K8 898 aa26.56■■□□□ 1.84
ATG4D-209ENST00000588857 GPBP1L1Q9HC44 474 aaPredicted RBP26.56■■□□□ 1.84
ATG4D-209ENST00000588857 PATL2C9JE40 543 aaKnown RBP26.55■■□□□ 1.84
ATG4D-209ENST00000588857 STRIP1Q5VSL9 837 aa26.55■■□□□ 1.84
ATG4D-209ENST00000588857 USP17L3A6NCW0 530 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 USP17L4A6NCW7 530 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 FOXP2O15409 715 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 USP17L1Q7RTZ2 530 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 RIOK1Q9BRS2 568 aaKnown RBP26.54■■□□□ 1.84
ATG4D-209ENST00000588857 NOL10Q9BSC4 688 aaKnown RBP26.54■■□□□ 1.84
ATG4D-209ENST00000588857 SLC4A4Q9Y6R1 1079 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 PSME4Q14997 1843 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 LTBP3Q9NS15 1303 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 FGAP02671 866 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 NACAP1Q9BZK3 213 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 KCNQ5Q9NR82 932 aa26.54■■□□□ 1.84
ATG4D-209ENST00000588857 ST18O60284 1047 aa26.53■■□□□ 1.84
ATG4D-209ENST00000588857 CYP21A2P08686 494 aa26.53■■□□□ 1.84
ATG4D-209ENST00000588857 IARSP41252 1262 aaKnown RBP26.53■■□□□ 1.84
ATG4D-209ENST00000588857 FKBP1AP62942 108 aaKnown RBP26.53■■□□□ 1.84
ATG4D-209ENST00000588857 KRT32Q14532 448 aa26.53■■□□□ 1.84
ATG4D-209ENST00000588857 DIXDC1Q155Q3 683 aa26.53■■□□□ 1.84
ATG4D-209ENST00000588857 TSGA10IPQ3SY00 556 aa26.53■■□□□ 1.84
ATG4D-209ENST00000588857 AATFQ9NY61 560 aaKnown RBP eCLIP26.53■■□□□ 1.84
ATG4D-209ENST00000588857 ZNF646O15015 1829 aaPredicted RBP26.52■■□□□ 1.84
ATG4D-209ENST00000588857 RPAP1Q9BWH6 1393 aaPredicted RBP26.52■■□□□ 1.84
ATG4D-209ENST00000588857 NEK4P51957 841 aa26.52■■□□□ 1.84
ATG4D-209ENST00000588857 DYNLL1P63167 89 aaKnown RBP26.52■■□□□ 1.84
ATG4D-209ENST00000588857 IMMTQ16891 758 aaKnown RBP26.52■■□□□ 1.84
ATG4D-209ENST00000588857 CERS5Q8N5B7 392 aa26.52■■□□□ 1.84
ATG4D-209ENST00000588857 IL27Q8NEV9 243 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms