RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 SNAPC2Q13487 334 aa9.4□□□□□ -0.9
TPM4-210ENST00000588507 ADGRE1Q14246 886 aa9.4□□□□□ -0.9
TPM4-210ENST00000588507 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.4□□□□□ -0.9
TPM4-210ENST00000588507 RIC3Q7Z5B4 369 aa9.4□□□□□ -0.9
TPM4-210ENST00000588507 ZBED3Q96IU2 234 aaPredicted RBP9.4□□□□□ -0.9
TPM4-210ENST00000588507 ANKRD36CQ5JPF3 1778 aa9.4□□□□□ -0.91
TPM4-210ENST00000588507 TPRP12270 2363 aaKnown RBP9.39□□□□□ -0.91
TPM4-210ENST00000588507 ZNF804BA4D1E1 1349 aa9.39□□□□□ -0.91
TPM4-210ENST00000588507 MYO3BQ8WXR4 1341 aa9.39□□□□□ -0.91
TPM4-210ENST00000588507 BTBD11A6QL63 1104 aa9.39□□□□□ -0.91
TPM4-210ENST00000588507 ERC2O15083 957 aa9.39□□□□□ -0.91
TPM4-210ENST00000588507 MAP3K9P80192 1104 aa9.39□□□□□ -0.91
TPM4-210ENST00000588507 IL17REQ8NFR9 667 aa9.39□□□□□ -0.91
TPM4-210ENST00000588507 RNPC3Q96LT9 517 aaKnown RBP9.39□□□□□ -0.91
TPM4-210ENST00000588507 MXD3Q9BW11 206 aa9.39□□□□□ -0.91
TPM4-210ENST00000588507 ZBTB3Q9H5J0 574 aa9.39□□□□□ -0.91
TPM4-210ENST00000588507 CSADQ9Y600 493 aa9.39□□□□□ -0.91
TPM4-210ENST00000588507 ZFHX2Q9C0A1 2572 aaPredicted RBP9.39□□□□□ -0.91
TPM4-210ENST00000588507 PDHXO00330 501 aa9.38□□□□□ -0.91
TPM4-210ENST00000588507 TNPO2O14787 897 aaKnown RBP9.38□□□□□ -0.91
TPM4-210ENST00000588507 UFL1O94874 794 aa9.38□□□□□ -0.91
TPM4-210ENST00000588507 BCRP11274 1271 aa9.38□□□□□ -0.91
TPM4-210ENST00000588507 ID4P47928 161 aa9.38□□□□□ -0.91
TPM4-210ENST00000588507 VGLL4Q14135 290 aa9.38□□□□□ -0.91
TPM4-210ENST00000588507 DACT2Q5SW24 774 aa9.38□□□□□ -0.91
TPM4-210ENST00000588507 ANKRD23Q86SG2 305 aa9.38□□□□□ -0.91
TPM4-210ENST00000588507 CELF1Q92879 486 aaKnown RBP9.38□□□□□ -0.91
TPM4-210ENST00000588507 PODXL2Q9NZ53 605 aa9.38□□□□□ -0.91
TPM4-210ENST00000588507 MGAMO43451 1857 aa9.38□□□□□ -0.91
TPM4-210ENST00000588507 LAMB2P55268 1798 aa9.37□□□□□ -0.91
TPM4-210ENST00000588507 SPDYE5A6NIY4 337 aa9.37□□□□□ -0.91
TPM4-210ENST00000588507 HMGCRP04035 888 aa9.37□□□□□ -0.91
TPM4-210ENST00000588507 ALADP13716 330 aa9.37□□□□□ -0.91
TPM4-210ENST00000588507 SKIV2LQ15477 1246 aaKnown RBP9.37□□□□□ -0.91
TPM4-210ENST00000588507 GIGYF2Q6Y7W6 1299 aaKnown RBP9.37□□□□□ -0.91
TPM4-210ENST00000588507 TTLL7Q6ZT98 887 aa9.37□□□□□ -0.91
TPM4-210ENST00000588507 BADQ92934 168 aa9.37□□□□□ -0.91
TPM4-210ENST00000588507 GGA1Q9UJY5 639 aa9.37□□□□□ -0.91
TPM4-210ENST00000588507 UNC79Q9P2D8 2635 aa9.37□□□□□ -0.91
TPM4-210ENST00000588507 USP34Q70CQ2 3546 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 OTOFQ9HC10 1997 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 PTPN5P54829 565 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 ACAP1Q15027 740 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 DLGAP5Q15398 846 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 ERO1BQ86YB8 467 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 CD320Q9NPF0 282 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 ANKIB1Q9P2G1 1089 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 KCNH4Q9UQ05 1017 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 ZNF318Q5VUA4 2279 aa9.36□□□□□ -0.91
TPM4-210ENST00000588507 LTBP2Q14767 1821 aa9.35□□□□□ -0.91
TPM4-210ENST00000588507 IRF6O14896 467 aa9.35□□□□□ -0.91
TPM4-210ENST00000588507 IL13P35225 146 aa9.35□□□□□ -0.91
TPM4-210ENST00000588507 STRIP1Q5VSL9 837 aa9.35□□□□□ -0.91
TPM4-210ENST00000588507 HERVK_113Q902F9 699 aa9.35□□□□□ -0.91
TPM4-210ENST00000588507 COA7Q96BR5 231 aa9.35□□□□□ -0.91
TPM4-210ENST00000588507 CNTNAP3BQ96NU0 1288 aa9.35□□□□□ -0.91
TPM4-210ENST00000588507 CNTNAP3Q9BZ76 1288 aa9.35□□□□□ -0.91
TPM4-210ENST00000588507 SENP6Q9GZR1 1112 aaPredicted RBP9.35□□□□□ -0.91
TPM4-210ENST00000588507 COG5Q9UP83 839 aa9.35□□□□□ -0.91
TPM4-210ENST00000588507 CHD6Q8TD26 2715 aa9.34□□□□□ -0.91
TPM4-210ENST00000588507 GNAT3A8MTJ3 354 aa9.34□□□□□ -0.91
TPM4-210ENST00000588507 MYO1BO43795 1136 aa9.34□□□□□ -0.91
TPM4-210ENST00000588507 PPIL2Q13356 520 aa9.34□□□□□ -0.91
TPM4-210ENST00000588507 RASA3Q14644 834 aa9.34□□□□□ -0.91
TPM4-210ENST00000588507 KIAA0825Q8IV33 1275 aa9.34□□□□□ -0.91
TPM4-210ENST00000588507 MICALL1Q8N3F8 863 aa9.34□□□□□ -0.91
TPM4-210ENST00000588507 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.34□□□□□ -0.91
TPM4-210ENST00000588507 PARK7Q99497 189 aaKnown RBP9.34□□□□□ -0.91
TPM4-210ENST00000588507 VEZTQ9HBM0 779 aa9.34□□□□□ -0.91
TPM4-210ENST00000588507 SIPA1L3O60292 1781 aaPredicted RBP9.33□□□□□ -0.92
TPM4-210ENST00000588507 CLRN2A0PK11 232 aa9.33□□□□□ -0.92
TPM4-210ENST00000588507 HMOX1P09601 288 aa9.33□□□□□ -0.92
TPM4-210ENST00000588507 RTP1P59025 263 aa9.33□□□□□ -0.92
TPM4-210ENST00000588507 TRIM32Q13049 653 aa9.33□□□□□ -0.92
TPM4-210ENST00000588507 MFSD14AQ96MC6 490 aa9.33□□□□□ -0.92
TPM4-210ENST00000588507 PRDM5Q9NQX1 630 aaPredicted RBP9.33□□□□□ -0.92
TPM4-210ENST00000588507 LRRC37A2A6NM11 1700 aa9.33□□□□□ -0.92
TPM4-210ENST00000588507 ZFHX4Q86UP3 3567 aa9.33□□□□□ -0.92
TPM4-210ENST00000588507 WDFY4Q6ZS81 3184 aa9.32□□□□□ -0.92
TPM4-210ENST00000588507 MED19A0JLT2 244 aaPredicted RBP9.32□□□□□ -0.92
TPM4-210ENST00000588507 ATN1P54259 1190 aaPredicted RBP9.32□□□□□ -0.92
TPM4-210ENST00000588507 RPS8P62241 208 aaKnown RBP9.32□□□□□ -0.92
TPM4-210ENST00000588507 PRSS33Q8NF86 280 aa9.32□□□□□ -0.92
TPM4-210ENST00000588507 RRP7AQ9Y3A4 280 aaKnown RBP9.32□□□□□ -0.92
TPM4-210ENST00000588507 SNCAIPQ9Y6H5 919 aa9.32□□□□□ -0.92
TPM4-210ENST00000588507 ANKRD11Q6UB99 2663 aaPredicted RBP9.32□□□□□ -0.92
TPM4-210ENST00000588507 MAST2Q6P0Q8 1798 aa9.32□□□□□ -0.92
TPM4-210ENST00000588507 FASNP49327 2511 aaKnown RBP9.32□□□□□ -0.92
TPM4-210ENST00000588507 SH3TC1Q8TE82 1336 aa9.31□□□□□ -0.92
TPM4-210ENST00000588507 CYP2C8P10632 490 aa9.31□□□□□ -0.92
TPM4-210ENST00000588507 SF3B3Q15393 1217 aaKnown RBP9.31□□□□□ -0.92
TPM4-210ENST00000588507 CCDC129Q6ZRS4 1044 aa9.31□□□□□ -0.92
TPM4-210ENST00000588507 GJD3Q8N144 294 aa9.31□□□□□ -0.92
TPM4-210ENST00000588507 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.31□□□□□ -0.92
TPM4-210ENST00000588507 ANKS1AQ92625 1134 aa9.31□□□□□ -0.92
TPM4-210ENST00000588507 PRRX2Q99811 253 aa9.31□□□□□ -0.92
TPM4-210ENST00000588507 TRMT112Q9UI30 125 aaKnown RBP9.31□□□□□ -0.92
TPM4-210ENST00000588507 ATP11BQ9Y2G3 1177 aa9.31□□□□□ -0.92
TPM4-210ENST00000588507 ACACBO00763 2458 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms