RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 DENND2AQ9ULE3 1009 aa12.99□□□□□ -0.33
TPM4-209ENST00000588483 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.99□□□□□ -0.33
TPM4-209ENST00000588483 FAM155AB1AL88 458 aaPredicted RBP12.98□□□□□ -0.33
TPM4-209ENST00000588483 SLC10A3P09131 477 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 ADORA1P30542 326 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 TIMM10P62072 90 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 NOGQ13253 232 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 G3BP1Q13283 466 aaKnown RBP eCLIP12.98□□□□□ -0.332e-7■□□□□ 10.2
TPM4-209ENST00000588483 PDE3AQ14432 1141 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 MAP3K11Q16584 847 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 HHIPL2Q6UWX4 724 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 TEKT1Q969V4 418 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 C1orf115Q9H7X2 142 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 DDX19BQ9UMR2 479 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
TPM4-209ENST00000588483 SSC5DA1L4H1 1573 aa12.98□□□□□ -0.33
TPM4-209ENST00000588483 UNCXA6NJT0 531 aa12.97□□□□□ -0.33
TPM4-209ENST00000588483 NF2P35240 595 aa12.97□□□□□ -0.33
TPM4-209ENST00000588483 TNFAIP1Q13829 316 aa12.97□□□□□ -0.33
TPM4-209ENST00000588483 RASGRF1Q13972 1273 aa12.97□□□□□ -0.33
TPM4-209ENST00000588483 FKBP1CQ5VVH2 108 aa12.97□□□□□ -0.33
TPM4-209ENST00000588483 CCDC102AQ96A19 550 aa12.97□□□□□ -0.33
TPM4-209ENST00000588483 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
TPM4-209ENST00000588483 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
TPM4-209ENST00000588483 ZNF70Q9UC06 446 aaPredicted RBP12.97□□□□□ -0.33
TPM4-209ENST00000588483 LAMB1P07942 1786 aa12.97□□□□□ -0.33
TPM4-209ENST00000588483 CLRN2A0PK11 232 aa12.96□□□□□ -0.33
TPM4-209ENST00000588483 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.33
TPM4-209ENST00000588483 RBM5P52756 815 aaKnown RBP eCLIP12.96□□□□□ -0.33
TPM4-209ENST00000588483 APOBEC3HQ6NTF7 200 aaKnown RBP12.96□□□□□ -0.33
TPM4-209ENST00000588483 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
TPM4-209ENST00000588483 ZGPATQ8N5A5 531 aaKnown RBP12.96□□□□□ -0.33
TPM4-209ENST00000588483 CHMP4BQ9H444 224 aaKnown RBP12.96□□□□□ -0.33
TPM4-209ENST00000588483 RPAP1Q9BWH6 1393 aaPredicted RBP12.95□□□□□ -0.34
TPM4-209ENST00000588483 FOXN1O15353 648 aa12.95□□□□□ -0.34
TPM4-209ENST00000588483 CA12O43570 354 aa12.95□□□□□ -0.34
TPM4-209ENST00000588483 AOC2O75106 756 aa12.95□□□□□ -0.34
TPM4-209ENST00000588483 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
TPM4-209ENST00000588483 PRDX5P30044 214 aa12.95□□□□□ -0.34
TPM4-209ENST00000588483 LDLRAD1Q5T700 205 aa12.95□□□□□ -0.34
TPM4-209ENST00000588483 PRAMEF18Q5VWM3 479 aa12.95□□□□□ -0.34
TPM4-209ENST00000588483 RPAP2Q8IXW5 612 aaPredicted RBP12.95□□□□□ -0.34
TPM4-209ENST00000588483 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
TPM4-209ENST00000588483 TDRD3Q9H7E2 651 aaKnown RBP12.95□□□□□ -0.34
TPM4-209ENST00000588483 COG6Q9Y2V7 657 aa12.95□□□□□ -0.34
TPM4-209ENST00000588483 AKAP11Q9UKA4 1901 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 LDHBP07195 334 aaKnown RBP12.94□□□□□ -0.34
TPM4-209ENST00000588483 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
TPM4-209ENST00000588483 ZNF157P51786 506 aaPredicted RBP12.94□□□□□ -0.34
TPM4-209ENST00000588483 RASA3Q14644 834 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 SUPT20HL1Q3ZLR7 823 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 TNNI3KQ59H18 835 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 ARMC9Q7Z3E5 817 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 FAM83AQ86UY5 434 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 RASAL3Q86YV0 1011 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
TPM4-209ENST00000588483 AIDAQ96BJ3 306 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 ZNF512BQ96KM6 892 aaPredicted RBP12.94□□□□□ -0.34
TPM4-209ENST00000588483 TEPSINQ96N21 525 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 VEZTQ9HBM0 779 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 FPGT-TNNI3KV9GXZ4 949 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 MYH2Q9UKX2 1941 aa12.94□□□□□ -0.34
TPM4-209ENST00000588483 GAKO14976 1311 aa12.93□□□□□ -0.34
TPM4-209ENST00000588483 IGSF3O75054 1194 aa12.93□□□□□ -0.34
TPM4-209ENST00000588483 TNNI2P48788 182 aa12.93□□□□□ -0.34
TPM4-209ENST00000588483 MOB2Q70IA6 237 aa12.93□□□□□ -0.34
TPM4-209ENST00000588483 ERC1Q8IUD2 1116 aa12.93□□□□□ -0.34
TPM4-209ENST00000588483 FAM163AQ96GL9 167 aaPredicted RBP12.93□□□□□ -0.34
TPM4-209ENST00000588483 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
TPM4-209ENST00000588483 ZIC5Q96T25 663 aa12.93□□□□□ -0.34
TPM4-209ENST00000588483 HMG20BQ9P0W2 317 aa12.93□□□□□ -0.34
TPM4-209ENST00000588483 DAGLAQ9Y4D2 1042 aa12.93□□□□□ -0.34
TPM4-209ENST00000588483 UQCRFS1P1P0C7P4 283 aa12.92□□□□□ -0.34
TPM4-209ENST00000588483 HSPA8P11142 646 aaKnown RBP12.92□□□□□ -0.34
TPM4-209ENST00000588483 GRM1Q13255 1194 aa12.92□□□□□ -0.34
TPM4-209ENST00000588483 HSP90AB4PQ58FF6 505 aa12.92□□□□□ -0.34
TPM4-209ENST00000588483 NBPF12Q5TAG4 269 aaPredicted RBP12.92□□□□□ -0.34
TPM4-209ENST00000588483 SPTY2D1Q68D10 685 aaPredicted RBP12.92□□□□□ -0.34
TPM4-209ENST00000588483 SIRT2Q8IXJ6 389 aa12.92□□□□□ -0.34
TPM4-209ENST00000588483 SPATA5Q8NB90 893 aa12.92□□□□□ -0.34
TPM4-209ENST00000588483 SAGE1Q9NXZ1 904 aa12.92□□□□□ -0.34
TPM4-209ENST00000588483 OTOFQ9HC10 1997 aa12.92□□□□□ -0.34
TPM4-209ENST00000588483 RFX7Q2KHR2 1363 aa12.92□□□□□ -0.34
TPM4-209ENST00000588483 UBE2Q2LH0YL09 131 aa12.91□□□□□ -0.34
TPM4-209ENST00000588483 PPP1R12BO60237 982 aaPredicted RBP12.91□□□□□ -0.34
TPM4-209ENST00000588483 MCAMP43121 646 aa12.91□□□□□ -0.34
TPM4-209ENST00000588483 OS9Q13438 667 aaPredicted RBP12.91□□□□□ -0.34
TPM4-209ENST00000588483 DIXDC1Q155Q3 683 aa12.91□□□□□ -0.34
TPM4-209ENST00000588483 COL13A1Q5TAT6 717 aaPredicted RBP12.91□□□□□ -0.34
TPM4-209ENST00000588483 C20orf194Q5TEA3 1177 aa12.91□□□□□ -0.34
TPM4-209ENST00000588483 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
TPM4-209ENST00000588483 TMOD2Q9NZR1 351 aa12.91□□□□□ -0.34
TPM4-209ENST00000588483 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
TPM4-209ENST00000588483 TCP10L2B9ZVM9 353 aa12.9□□□□□ -0.34
TPM4-209ENST00000588483 HMMRO75330 724 aa12.9□□□□□ -0.34
TPM4-209ENST00000588483 USP2O75604 605 aaPredicted RBP12.9□□□□□ -0.34
TPM4-209ENST00000588483 KIF23Q02241 960 aaPredicted RBP12.9□□□□□ -0.34
TPM4-209ENST00000588483 TTLL12Q14166 644 aaPredicted RBP12.9□□□□□ -0.34
TPM4-209ENST00000588483 CCDC158Q5M9N0 1113 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms