RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 GTF2A2P52657 109 aa19.43■□□□□ 0.7
IFT20-216ENST00000588477 CCDC57Q2TAC2 916 aa19.43■□□□□ 0.7
IFT20-216ENST00000588477 TAF7LQ5H9L4 462 aa19.43■□□□□ 0.7
IFT20-216ENST00000588477 WWC1Q8IX03 1113 aa19.43■□□□□ 0.7
IFT20-216ENST00000588477 CNNM1Q9NRU3 951 aa19.43■□□□□ 0.7
IFT20-216ENST00000588477 SERPINA10Q9UK55 444 aa19.43■□□□□ 0.7
IFT20-216ENST00000588477 MAP3K9P80192 1104 aa19.42■□□□□ 0.7
IFT20-216ENST00000588477 VGLL4Q14135 290 aa19.42■□□□□ 0.7
IFT20-216ENST00000588477 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
IFT20-216ENST00000588477 FAM43AQ8N2R8 423 aa19.42■□□□□ 0.7
IFT20-216ENST00000588477 TDRD7Q8NHU6 1098 aaKnown RBP19.42■□□□□ 0.7
IFT20-216ENST00000588477 TMEM39BQ9GZU3 492 aa19.42■□□□□ 0.7
IFT20-216ENST00000588477 GYG1P46976 350 aa19.41■□□□□ 0.7
IFT20-216ENST00000588477 TNNI2P48788 182 aa19.41■□□□□ 0.7
IFT20-216ENST00000588477 CCDC27Q2M243 656 aa19.41■□□□□ 0.7
IFT20-216ENST00000588477 EPHA10Q5JZY3 1008 aa19.41■□□□□ 0.7
IFT20-216ENST00000588477 OTUD5Q96G74 571 aa19.41■□□□□ 0.7
IFT20-216ENST00000588477 CSADQ9Y600 493 aa19.41■□□□□ 0.7
IFT20-216ENST00000588477 F6X3S4 739 aa19.4■□□□□ 0.7
IFT20-216ENST00000588477 HIBADHP31937 336 aaKnown RBP19.4■□□□□ 0.7
IFT20-216ENST00000588477 CRKP46108 304 aa19.4■□□□□ 0.7
IFT20-216ENST00000588477 BEND3Q5T5X7 828 aa19.4■□□□□ 0.7
IFT20-216ENST00000588477 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.4■□□□□ 0.73e-8■■■□□ 15.3
IFT20-216ENST00000588477 MYH13Q9UKX3 1938 aa19.39■□□□□ 0.7
IFT20-216ENST00000588477 UBE4AQ14139 1066 aa19.39■□□□□ 0.69
IFT20-216ENST00000588477 SH3TC2Q8TF17 1288 aa19.39■□□□□ 0.69
IFT20-216ENST00000588477 FAM84BQ96KN1 310 aaPredicted RBP19.39■□□□□ 0.69
IFT20-216ENST00000588477 ARHGAP39Q9C0H5 1083 aa19.39■□□□□ 0.69
IFT20-216ENST00000588477 CEP290O15078 2479 aa19.38■□□□□ 0.69
IFT20-216ENST00000588477 VAMP4O75379 141 aa19.38■□□□□ 0.69
IFT20-216ENST00000588477 WDHD1O75717 1129 aaPredicted RBP19.38■□□□□ 0.69
IFT20-216ENST00000588477 IL16Q14005 1332 aa19.38■□□□□ 0.69
IFT20-216ENST00000588477 KIF22Q14807 665 aa19.38■□□□□ 0.69
IFT20-216ENST00000588477 MGAMO43451 1857 aa19.37■□□□□ 0.69
IFT20-216ENST00000588477 TLR2O60603 784 aa19.37■□□□□ 0.69
IFT20-216ENST00000588477 FANCIQ9NVI1 1328 aa19.36■□□□□ 0.69
IFT20-216ENST00000588477 SPDYE5A6NIY4 337 aa19.36■□□□□ 0.69
IFT20-216ENST00000588477 H0YGN5 161 aa19.36■□□□□ 0.69
IFT20-216ENST00000588477 GRM8O00222 908 aa19.36■□□□□ 0.69
IFT20-216ENST00000588477 ECM2O94769 699 aaPredicted RBP19.36■□□□□ 0.69
IFT20-216ENST00000588477 CACNB3P54284 484 aa19.36■□□□□ 0.69
IFT20-216ENST00000588477 LACTBP83111 547 aaPredicted RBP19.36■□□□□ 0.69
IFT20-216ENST00000588477 GRIK5Q16478 980 aa19.36■□□□□ 0.69
IFT20-216ENST00000588477 PUS3Q9BZE2 481 aaKnown RBP19.36■□□□□ 0.69
IFT20-216ENST00000588477 IQSEC3Q9UPP2 1182 aaPredicted RBP19.36■□□□□ 0.69
IFT20-216ENST00000588477 BTBD19C9JJ37 291 aa19.35■□□□□ 0.69
IFT20-216ENST00000588477 CETPP11597 493 aa19.35■□□□□ 0.69
IFT20-216ENST00000588477 CCDC184Q52MB2 194 aa19.35■□□□□ 0.69
IFT20-216ENST00000588477 ZKSCAN4Q969J2 545 aaPredicted RBP19.35■□□□□ 0.69
IFT20-216ENST00000588477 C9orf78Q9NZ63 289 aaPredicted RBP19.35■□□□□ 0.69
IFT20-216ENST00000588477 SNCAIPQ9Y6H5 919 aa19.35■□□□□ 0.69
IFT20-216ENST00000588477 TRIOBPQ9H2D6 2365 aa19.34■□□□□ 0.69
IFT20-216ENST00000588477 IRF6O14896 467 aa19.34■□□□□ 0.69
IFT20-216ENST00000588477 EXOSC9Q06265 439 aaKnown RBP19.34■□□□□ 0.69
IFT20-216ENST00000588477 ERO1BQ86YB8 467 aa19.34■□□□□ 0.69
IFT20-216ENST00000588477 WRNIP1Q96S55 665 aa19.34■□□□□ 0.69
IFT20-216ENST00000588477 SZT2Q5T011 3432 aa19.34■□□□□ 0.69
IFT20-216ENST00000588477 GNRH1P01148 92 aa19.33■□□□□ 0.68
IFT20-216ENST00000588477 CHAF1AQ13111 956 aaPredicted RBP19.33■□□□□ 0.68
IFT20-216ENST00000588477 SNAPC2Q13487 334 aa19.33■□□□□ 0.68
IFT20-216ENST00000588477 VPS37DQ86XT2 251 aa19.33■□□□□ 0.68
IFT20-216ENST00000588477 ZCCHC17Q9NP64 241 aaKnown RBP19.33■□□□□ 0.68
IFT20-216ENST00000588477 FRAT2O75474 233 aaPredicted RBP19.32■□□□□ 0.68
IFT20-216ENST00000588477 HDLBPQ00341 1268 aaKnown RBP19.32■□□□□ 0.68
IFT20-216ENST00000588477 MTFR1Q15390 333 aa19.32■□□□□ 0.68
IFT20-216ENST00000588477 TEKT1Q969V4 418 aa19.32■□□□□ 0.68
IFT20-216ENST00000588477 PRMT2P55345 433 aa19.31■□□□□ 0.68
IFT20-216ENST00000588477 CHRDL2Q6WN34 429 aa19.31■□□□□ 0.68
IFT20-216ENST00000588477 FBXO33Q7Z6M2 555 aa19.31■□□□□ 0.68
IFT20-216ENST00000588477 DPF3Q92784 378 aa19.31■□□□□ 0.68
IFT20-216ENST00000588477 TMOD2Q9NZR1 351 aa19.31■□□□□ 0.68
IFT20-216ENST00000588477 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
IFT20-216ENST00000588477 RIPOR2Q9Y4F9 1068 aa19.31■□□□□ 0.68
IFT20-216ENST00000588477 MROH5Q6ZUA9 1318 aa19.3■□□□□ 0.68
IFT20-216ENST00000588477 PPIL2Q13356 520 aa19.3■□□□□ 0.68
IFT20-216ENST00000588477 SLC4A10Q6U841 1118 aa19.3■□□□□ 0.68
IFT20-216ENST00000588477 C17orf99Q6UX52 265 aa19.3■□□□□ 0.68
IFT20-216ENST00000588477 FAM83AQ86UY5 434 aa19.3■□□□□ 0.68
IFT20-216ENST00000588477 TBC1D22AQ8WUA7 517 aa19.3■□□□□ 0.68
IFT20-216ENST00000588477 SUCLG2Q96I99 432 aa19.3■□□□□ 0.68
IFT20-216ENST00000588477 CPA4Q9UI42 421 aa19.3■□□□□ 0.68
IFT20-216ENST00000588477 ALDH1L1O75891 902 aa19.29■□□□□ 0.68
IFT20-216ENST00000588477 CTGFP29279 349 aa19.29■□□□□ 0.68
IFT20-216ENST00000588477 PSMC4P43686 418 aa19.29■□□□□ 0.68
IFT20-216ENST00000588477 CAVIN4Q5BKX8 364 aa19.29■□□□□ 0.68
IFT20-216ENST00000588477 SHISA4Q96DD7 197 aa19.29■□□□□ 0.68
IFT20-216ENST00000588477 HOOK2Q96ED9 719 aa19.29■□□□□ 0.68
IFT20-216ENST00000588477 KAZALD1Q96I82 304 aa19.29■□□□□ 0.68
IFT20-216ENST00000588477 PPATQ06203 517 aa19.28■□□□□ 0.68
IFT20-216ENST00000588477 NCBP3Q53F19 620 aaKnown RBP19.28■□□□□ 0.68
IFT20-216ENST00000588477 DCAF15Q66K64 600 aa19.28■□□□□ 0.68
IFT20-216ENST00000588477 MIGA2Q7L4E1 593 aa19.28■□□□□ 0.68
IFT20-216ENST00000588477 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.28■□□□□ 0.68
IFT20-216ENST00000588477 ZDHHC15Q96MV8 337 aa19.28■□□□□ 0.68
IFT20-216ENST00000588477 SRCIN1Q9C0H9 1055 aa19.28■□□□□ 0.68
IFT20-216ENST00000588477 RBM27Q9P2N5 1060 aaKnown RBP19.28■□□□□ 0.68
IFT20-216ENST00000588477 SRRDQ9UH36 339 aa19.28■□□□□ 0.68
IFT20-216ENST00000588477 LRRC24Q50LG9 513 aa19.27■□□□□ 0.68
IFT20-216ENST00000588477 APOBEC3HQ6NTF7 200 aaKnown RBP19.27■□□□□ 0.68
IFT20-216ENST00000588477 WDR63Q8IWG1 891 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms