RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 UBE2OQ9C0C9 1292 aaKnown RBP8.06□□□□□ -1.12
TUBD1-208ENST00000588009 PRKAG3Q9UGI9 489 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 SAMM50Q9Y512 469 aa8.06□□□□□ -1.12
TUBD1-208ENST00000588009 SIN3BO75182 1162 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 LMNB1P20700 586 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 CDK11BP21127 795 aaKnown RBP8.05□□□□□ -1.12
TUBD1-208ENST00000588009 PCDH1Q08174 1060 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 RAB33AQ14088 237 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 RASIP1Q5U651 963 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 EGFLAMQ63HQ2 1017 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 FOXR1Q6PIV2 292 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 JAZF1Q86VZ6 243 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 FBXO27Q8NI29 283 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 GATAD2BQ8WXI9 593 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 JARID2Q92833 1246 aaPredicted RBP8.05□□□□□ -1.12
TUBD1-208ENST00000588009 TRIM55Q9BYV6 548 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 MIR1-1HGQ9H1L0 117 aa8.05□□□□□ -1.12
TUBD1-208ENST00000588009 FAM221AA4D161 298 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 GPR25O00155 361 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 B3GALT4O96024 378 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 NME2P22392 152 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 ZNF423Q2M1K9 1284 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 ZNF468Q5VIY5 522 aaPredicted RBP8.04□□□□□ -1.12
TUBD1-208ENST00000588009 HNRNPLLQ8WVV9 542 aaKnown RBP8.04□□□□□ -1.12
TUBD1-208ENST00000588009 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 SHDQ96IW2 340 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 PPT2Q9UMR5 302 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 SOX13Q9UN79 622 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 CYP8B1Q9UNU6 501 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 SBNO2Q9Y2G9 1366 aa8.04□□□□□ -1.12
TUBD1-208ENST00000588009 C2CD2LO14523 706 aa8.03□□□□□ -1.12
TUBD1-208ENST00000588009 U2SURPO15042 1029 aaKnown RBP8.03□□□□□ -1.12
TUBD1-208ENST00000588009 CPB1P15086 417 aa8.03□□□□□ -1.12
TUBD1-208ENST00000588009 PTPRAP18433 802 aa8.03□□□□□ -1.12
TUBD1-208ENST00000588009 CCDC81Q6ZN84 652 aa8.03□□□□□ -1.12
TUBD1-208ENST00000588009 VN1R5Q7Z5H4 357 aa8.03□□□□□ -1.12
TUBD1-208ENST00000588009 FAM35AQ86V20 835 aa8.03□□□□□ -1.12
TUBD1-208ENST00000588009 MICALL1Q8N3F8 863 aa8.03□□□□□ -1.12
TUBD1-208ENST00000588009 ADAM19Q9H013 955 aa8.03□□□□□ -1.12
TUBD1-208ENST00000588009 R3HCC1Q9Y3T6 440 aaKnown RBP8.03□□□□□ -1.12
TUBD1-208ENST00000588009 SMAD7O15105 426 aaKnown RBP8.02□□□□□ -1.13
TUBD1-208ENST00000588009 CILPO75339 1184 aa8.02□□□□□ -1.13
TUBD1-208ENST00000588009 ARNTP27540 789 aa8.02□□□□□ -1.13
TUBD1-208ENST00000588009 PCBP4P57723 403 aaKnown RBP8.02□□□□□ -1.13
TUBD1-208ENST00000588009 MPP2Q14168 576 aa8.02□□□□□ -1.13
TUBD1-208ENST00000588009 LRRC14Q15048 493 aa8.02□□□□□ -1.13
TUBD1-208ENST00000588009 ADAMTSL4Q6UY14 1074 aa8.02□□□□□ -1.13
TUBD1-208ENST00000588009 VWA5B2Q8N398 1253 aa8.02□□□□□ -1.13
TUBD1-208ENST00000588009 STK35Q8TDR2 534 aa8.02□□□□□ -1.13
TUBD1-208ENST00000588009 TNFRSF25Q93038 417 aa8.02□□□□□ -1.13
TUBD1-208ENST00000588009 SRPK1Q96SB4 655 aaKnown RBP8.02□□□□□ -1.13
TUBD1-208ENST00000588009 SLC6A14Q9UN76 642 aa8.02□□□□□ -1.13
TUBD1-208ENST00000588009 MRPL42Q9Y6G3 142 aaKnown RBP8.02□□□□□ -1.13
TUBD1-208ENST00000588009 CDC14CA4D256 554 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 BMP4P12644 408 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 MCM4P33991 863 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 GIPRP48546 466 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 ZNF165P49910 485 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 EIF6P56537 245 aaKnown RBP8.01□□□□□ -1.13
TUBD1-208ENST00000588009 SEPT6Q14141 434 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 TCEAL1Q15170 157 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 CWF19L2Q2TBE0 894 aaKnown RBP8.01□□□□□ -1.13
TUBD1-208ENST00000588009 TNNI3KQ59H18 835 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 PERM1Q5SV97 790 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 DIEXFQ68CQ4 756 aaKnown RBP8.01□□□□□ -1.13
TUBD1-208ENST00000588009 SULF2Q8IWU5 870 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 GRIN3AQ8TCU5 1115 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 EMILIN2Q9BXX0 1053 aa8.01□□□□□ -1.13
TUBD1-208ENST00000588009 AVENQ9NQS1 362 aaPredicted RBP8.01□□□□□ -1.13
TUBD1-208ENST00000588009 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.01□□□□□ -1.13
TUBD1-208ENST00000588009 ESRRAP11474 423 aaPredicted RBP8□□□□□ -1.13
TUBD1-208ENST00000588009 LLGL2Q6P1M3 1020 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 SV2AQ7L0J3 742 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 ANKRD13AQ8IZ07 590 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 REXO1Q8N1G1 1221 aaKnown RBP8□□□□□ -1.13
TUBD1-208ENST00000588009 FAM169BQ8N8A8 192 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 FERD3LQ96RJ6 166 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 LACRTQ9GZZ8 138 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 SMG9Q9H0W8 520 aaKnown RBP8□□□□□ -1.13
TUBD1-208ENST00000588009 CBX8Q9HC52 389 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 BRMS1Q9HCU9 246 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 TRIM33Q9UPN9 1127 aa8□□□□□ -1.13
TUBD1-208ENST00000588009 HSD3B2P26439 372 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 FBXW10Q5XX13 1052 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 KANK3Q6NY19 840 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 ELMSAN1Q6PJG2 1045 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 REC114Q7Z4M0 266 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 NANOS1Q8WY41 292 aaKnown RBP7.99□□□□□ -1.13
TUBD1-208ENST00000588009 DEPDC7Q96QD5 511 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 CRBNQ96SW2 442 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 SH2B1Q9NRF2 756 aaPredicted RBP7.99□□□□□ -1.13
TUBD1-208ENST00000588009 SNTG2Q9NY99 539 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 KLF15Q9UIH9 416 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 NAGPAQ9UK23 515 aa7.99□□□□□ -1.13
TUBD1-208ENST00000588009 FAM221BA6H8Z2 402 aa7.98□□□□□ -1.13
TUBD1-208ENST00000588009 ADARB2-AS1A8MUL3 147 aa7.98□□□□□ -1.13
TUBD1-208ENST00000588009 BPNT1O95861 308 aa7.98□□□□□ -1.13
TUBD1-208ENST00000588009 ADH7P40394 386 aa7.98□□□□□ -1.13
TUBD1-208ENST00000588009 ZNF252P-AS1Q0IIN9 211 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms