RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RABL6Q3YEC7 729 aaPredicted RBP17.72■□□□□ 0.43
DNMT1-213ENST00000587604 INTS3Q68E01 1043 aaKnown RBP17.72■□□□□ 0.43
DNMT1-213ENST00000587604 VPS37DQ86XT2 251 aa17.72■□□□□ 0.43
DNMT1-213ENST00000587604 OTOFQ9HC10 1997 aa17.71■□□□□ 0.43
DNMT1-213ENST00000587604 TNNI2P48788 182 aa17.71■□□□□ 0.43
DNMT1-213ENST00000587604 HDLBPQ00341 1268 aaKnown RBP17.71■□□□□ 0.43
DNMT1-213ENST00000587604 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.71■□□□□ 0.43
DNMT1-213ENST00000587604 FAM9BQ8IZU0 186 aa17.71■□□□□ 0.43
DNMT1-213ENST00000587604 OPTNQ96CV9 577 aa17.71■□□□□ 0.43
DNMT1-213ENST00000587604 MS4A4AQ96JQ5 239 aa17.71■□□□□ 0.43
DNMT1-213ENST00000587604 BICC1Q9H694 974 aaKnown RBP17.71■□□□□ 0.43
DNMT1-213ENST00000587604 ELP3Q9H9T3 547 aa17.71■□□□□ 0.43
DNMT1-213ENST00000587604 PTPN22Q9Y2R2 807 aa17.71■□□□□ 0.43
DNMT1-213ENST00000587604 ARAP2Q8WZ64 1704 aa17.71■□□□□ 0.43
DNMT1-213ENST00000587604 TCP10L2B9ZVM9 353 aa17.7■□□□□ 0.42
DNMT1-213ENST00000587604 SP3Q02447 781 aa17.7■□□□□ 0.42
DNMT1-213ENST00000587604 CAVIN4Q5BKX8 364 aa17.7■□□□□ 0.42
DNMT1-213ENST00000587604 CDAN1Q8IWY9 1227 aa17.7■□□□□ 0.42
DNMT1-213ENST00000587604 TBC1D22AQ8WUA7 517 aa17.7■□□□□ 0.42
DNMT1-213ENST00000587604 TMEM39BQ9GZU3 492 aa17.7■□□□□ 0.42
DNMT1-213ENST00000587604 FRAT2O75474 233 aaPredicted RBP17.69■□□□□ 0.42
DNMT1-213ENST00000587604 PDE8BO95263 885 aa17.69■□□□□ 0.42
DNMT1-213ENST00000587604 MAP3K9P80192 1104 aa17.69■□□□□ 0.42
DNMT1-213ENST00000587604 GRIK5Q16478 980 aa17.69■□□□□ 0.42
DNMT1-213ENST00000587604 LRRC24Q50LG9 513 aa17.69■□□□□ 0.42
DNMT1-213ENST00000587604 METTL24Q5JXM2 366 aa17.69■□□□□ 0.42
DNMT1-213ENST00000587604 CD99L2Q8TCZ2 262 aa17.69■□□□□ 0.42
DNMT1-213ENST00000587604 MRIQ9BWK5 157 aa17.69■□□□□ 0.42
DNMT1-213ENST00000587604 EFCC1Q9HA90 598 aa17.69■□□□□ 0.42
DNMT1-213ENST00000587604 MKI67P46013 3256 aaKnown RBP17.68■□□□□ 0.42
DNMT1-213ENST00000587604 GTF2A2P52657 109 aa17.68■□□□□ 0.42
DNMT1-213ENST00000587604 CHAF1AQ13111 956 aaPredicted RBP17.68■□□□□ 0.42
DNMT1-213ENST00000587604 VGLL4Q14135 290 aa17.68■□□□□ 0.42
DNMT1-213ENST00000587604 MRPL50Q8N5N7 158 aaKnown RBP17.68■□□□□ 0.42
DNMT1-213ENST00000587604 ANKRD44Q8N8A2 993 aa17.68■□□□□ 0.42
DNMT1-213ENST00000587604 VGLL2Q8N8G2 317 aa17.68■□□□□ 0.42
DNMT1-213ENST00000587604 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.68■□□□□ 0.42
DNMT1-213ENST00000587604 IQSEC3Q9UPP2 1182 aaPredicted RBP17.68■□□□□ 0.42
DNMT1-213ENST00000587604 ZNF521Q96K83 1311 aa17.68■□□□□ 0.42
DNMT1-213ENST00000587604 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
DNMT1-213ENST00000587604 CNKSR2Q8WXI2 1034 aa17.67■□□□□ 0.42
DNMT1-213ENST00000587604 BRI3BPQ8WY22 251 aa17.67■□□□□ 0.42
DNMT1-213ENST00000587604 TEKT1Q969V4 418 aa17.67■□□□□ 0.42
DNMT1-213ENST00000587604 CSADQ9Y600 493 aa17.67■□□□□ 0.42
DNMT1-213ENST00000587604 POTEFA5A3E0 1075 aa17.66■□□□□ 0.42
DNMT1-213ENST00000587604 BCAMP50895 628 aa17.66■□□□□ 0.42
DNMT1-213ENST00000587604 ARMC5Q96C12 935 aa17.66■□□□□ 0.42
DNMT1-213ENST00000587604 ZDHHC15Q96MV8 337 aa17.66■□□□□ 0.42
DNMT1-213ENST00000587604 ZFYVE28Q9HCC9 887 aa17.66■□□□□ 0.42
DNMT1-213ENST00000587604 SUGT1Q9Y2Z0 365 aa17.66■□□□□ 0.42
DNMT1-213ENST00000587604 PTPRCP08575 1304 aa17.66■□□□□ 0.42
DNMT1-213ENST00000587604 BRCA2P51587 3418 aa17.65■□□□□ 0.42
DNMT1-213ENST00000587604 CCL15-CCL14A0A0B4J2E2 113 aa17.65■□□□□ 0.42
DNMT1-213ENST00000587604 CAP1Q01518 475 aa17.65■□□□□ 0.42
DNMT1-213ENST00000587604 ARHGEF6Q15052 776 aa17.65■□□□□ 0.42
DNMT1-213ENST00000587604 CCL15Q16663 113 aa17.65■□□□□ 0.42
DNMT1-213ENST00000587604 FKBP1CQ5VVH2 108 aa17.65■□□□□ 0.42
DNMT1-213ENST00000587604 FAM83AQ86UY5 434 aa17.65■□□□□ 0.42
DNMT1-213ENST00000587604 USP44Q9H0E7 712 aa17.65■□□□□ 0.42
DNMT1-213ENST00000587604 KIF16BQ96L93 1317 aa17.65■□□□□ 0.42
DNMT1-213ENST00000587604 RBBP6Q7Z6E9 1792 aaKnown RBP17.64■□□□□ 0.41
DNMT1-213ENST00000587604 CACNB3P54284 484 aa17.64■□□□□ 0.41
DNMT1-213ENST00000587604 TAF1CQ15572 869 aaPredicted RBP17.64■□□□□ 0.41
DNMT1-213ENST00000587604 KLHDC4Q8TBB5 520 aa17.64■□□□□ 0.41
DNMT1-213ENST00000587604 HOOK2Q96ED9 719 aa17.64■□□□□ 0.41
DNMT1-213ENST00000587604 OTUD5Q96G74 571 aa17.64■□□□□ 0.41
DNMT1-213ENST00000587604 TMOD2Q9NZR1 351 aa17.64■□□□□ 0.41
DNMT1-213ENST00000587604 MAST3O60307 1309 aa17.64■□□□□ 0.41
DNMT1-213ENST00000587604 SPDYE5A6NIY4 337 aa17.63■□□□□ 0.41
DNMT1-213ENST00000587604 IFIT1P09914 478 aaKnown RBP17.63■□□□□ 0.41
DNMT1-213ENST00000587604 FGFR2P21802 821 aa17.63■□□□□ 0.41
DNMT1-213ENST00000587604 ZEB1P37275 1124 aaPredicted RBP17.63■□□□□ 0.41
DNMT1-213ENST00000587604 PUM3Q15397 648 aaKnown RBP17.63■□□□□ 0.41
DNMT1-213ENST00000587604 APOBEC3HQ6NTF7 200 aaKnown RBP17.63■□□□□ 0.41
DNMT1-213ENST00000587604 HHIPL2Q6UWX4 724 aa17.63■□□□□ 0.41
DNMT1-213ENST00000587604 ERO1BQ86YB8 467 aa17.63■□□□□ 0.41
DNMT1-213ENST00000587604 FAM43AQ8N2R8 423 aa17.63■□□□□ 0.41
DNMT1-213ENST00000587604 WDHD1O75717 1129 aaPredicted RBP17.62■□□□□ 0.41
DNMT1-213ENST00000587604 CETPP11597 493 aa17.62■□□□□ 0.41
DNMT1-213ENST00000587604 SSH1Q8WYL5 1049 aa17.62■□□□□ 0.41
DNMT1-213ENST00000587604 GCC1Q96CN9 775 aa17.62■□□□□ 0.41
DNMT1-213ENST00000587604 ZCCHC17Q9NP64 241 aaKnown RBP17.62■□□□□ 0.41
DNMT1-213ENST00000587604 SNCAIPQ9Y6H5 919 aa17.62■□□□□ 0.41
DNMT1-213ENST00000587604 EYA2O00167 538 aa17.61■□□□□ 0.41
DNMT1-213ENST00000587604 WRNIP1Q96S55 665 aa17.61■□□□□ 0.41
DNMT1-213ENST00000587604 E9PSI1 815 aa17.6■□□□□ 0.41
DNMT1-213ENST00000587604 EN2P19622 333 aaPredicted RBP17.6■□□□□ 0.41
DNMT1-213ENST00000587604 RFX5P48382 616 aaPredicted RBP17.6■□□□□ 0.41
DNMT1-213ENST00000587604 DCAF15Q66K64 600 aa17.6■□□□□ 0.41
DNMT1-213ENST00000587604 NBPF11Q86T75 865 aa17.6■□□□□ 0.41
DNMT1-213ENST00000587604 WDR66Q8TBY9 1149 aa17.6■□□□□ 0.41
DNMT1-213ENST00000587604 LPIN2Q92539 896 aa17.6■□□□□ 0.41
DNMT1-213ENST00000587604 ZKSCAN4Q969J2 545 aaPredicted RBP17.6■□□□□ 0.41
DNMT1-213ENST00000587604 ZNF333Q96JL9 665 aa17.6■□□□□ 0.41
DNMT1-213ENST00000587604 TMEM106CQ9BVX2 250 aa17.6■□□□□ 0.41
DNMT1-213ENST00000587604 MYH13Q9UKX3 1938 aa17.6■□□□□ 0.41
DNMT1-213ENST00000587604 AK9Q5TCS8 1911 aa17.59■□□□□ 0.41
DNMT1-213ENST00000587604 RPAP1Q9BWH6 1393 aaPredicted RBP17.59■□□□□ 0.41
DNMT1-213ENST00000587604 IRF6O14896 467 aa17.59■□□□□ 0.41
DNMT1-213ENST00000587604 TLR2O60603 784 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms