RNA–Protein interactions for RNA: ENST00000587476.1

TUBD1-207, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 825 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-207ENST00000587476 SIN3BO75182 1162 aa6.84□□□□□ -1.31
TUBD1-207ENST00000587476 B3GALT4O96024 378 aa6.84□□□□□ -1.31
TUBD1-207ENST00000587476 SNRPBP14678 240 aaKnown RBP6.84□□□□□ -1.31
TUBD1-207ENST00000587476 PTPRAP18433 802 aa6.84□□□□□ -1.31
TUBD1-207ENST00000587476 ZNF165P49910 485 aa6.84□□□□□ -1.31
TUBD1-207ENST00000587476 OR6P1Q8NGX9 317 aa6.84□□□□□ -1.31
TUBD1-207ENST00000587476 SHDQ96IW2 340 aa6.84□□□□□ -1.31
TUBD1-207ENST00000587476 FERD3LQ96RJ6 166 aa6.84□□□□□ -1.31
TUBD1-207ENST00000587476 EMILIN2Q9BXX0 1053 aa6.84□□□□□ -1.31
TUBD1-207ENST00000587476 TLR3O15455 904 aaKnown RBP6.83□□□□□ -1.32
TUBD1-207ENST00000587476 BPNT1O95861 308 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 BMP6P22004 513 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 HSD3B2P26439 372 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 MCM4P33991 863 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 ZNF157P51786 506 aaPredicted RBP6.83□□□□□ -1.32
TUBD1-207ENST00000587476 EIF6P56537 245 aaKnown RBP6.83□□□□□ -1.32
TUBD1-207ENST00000587476 CTBSQ01459 385 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 LLGL2Q6P1M3 1020 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 BNC2Q6ZN30 1099 aaPredicted RBP6.83□□□□□ -1.32
TUBD1-207ENST00000587476 CCDC81Q6ZN84 652 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 ZNF662Q6ZS27 426 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 LRP10Q7Z4F1 713 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 FAM35AQ86V20 835 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 SULF2Q8IWU5 870 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 DDX54Q8TDD1 881 aaKnown RBP6.83□□□□□ -1.32
TUBD1-207ENST00000587476 JARID2Q92833 1246 aaPredicted RBP6.83□□□□□ -1.32
TUBD1-207ENST00000587476 PLD4Q96BZ4 506 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 TRIM47Q96LD4 638 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 CRBNQ96SW2 442 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 AVENQ9NQS1 362 aaPredicted RBP6.83□□□□□ -1.32
TUBD1-207ENST00000587476 SOX13Q9UN79 622 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.83□□□□□ -1.32
TUBD1-207ENST00000587476 PCDHB5Q9Y5E4 795 aa6.83□□□□□ -1.32
TUBD1-207ENST00000587476 MRPL42Q9Y6G3 142 aaKnown RBP6.83□□□□□ -1.32
TUBD1-207ENST00000587476 FAM221AA4D161 298 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 SMAD7O15105 426 aaKnown RBP6.82□□□□□ -1.32
TUBD1-207ENST00000587476 IMPDH2P12268 514 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 BMP4P12644 408 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 CPB1P15086 417 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 SEPT6Q14141 434 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 SCARA3Q6AZY7 606 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 REC114Q7Z4M0 266 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 FBXO27Q8NI29 283 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 TNFRSF25Q93038 417 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 ADAM19Q9H013 955 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 CBX8Q9HC52 389 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 SNTG2Q9NY99 539 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 PPT2Q9UMR5 302 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 SLC6A14Q9UN76 642 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
TUBD1-207ENST00000587476 CDC14CA4D256 554 aa6.81□□□□□ -1.32
TUBD1-207ENST00000587476 CILPO75339 1184 aa6.81□□□□□ -1.32
TUBD1-207ENST00000587476 ARNTP27540 789 aa6.81□□□□□ -1.32
TUBD1-207ENST00000587476 CABP4P57796 275 aa6.81□□□□□ -1.32
TUBD1-207ENST00000587476 RASA3Q14644 834 aa6.81□□□□□ -1.32
TUBD1-207ENST00000587476 TCEAL1Q15170 157 aa6.81□□□□□ -1.32
TUBD1-207ENST00000587476 FBXW10Q5XX13 1052 aa6.81□□□□□ -1.32
TUBD1-207ENST00000587476 ELMSAN1Q6PJG2 1045 aa6.81□□□□□ -1.32
TUBD1-207ENST00000587476 REXO1Q8N1G1 1221 aaKnown RBP6.81□□□□□ -1.32
TUBD1-207ENST00000587476 DEPDC7Q96QD5 511 aa6.81□□□□□ -1.32
TUBD1-207ENST00000587476 GPR25O00155 361 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 ENPP3O14638 875 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 GIPRP48546 466 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 ZNF423Q2M1K9 1284 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 PERM1Q5SV97 790 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 RASIP1Q5U651 963 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 VN1R5Q7Z5H4 357 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 CACTIN-AS1Q8N1I8 211 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 SMG9Q9H0W8 520 aaKnown RBP6.8□□□□□ -1.32
TUBD1-207ENST00000587476 BRMS1Q9HCU9 246 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 ACTR10Q9NZ32 417 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 FRRS1LQ9P0K9 344 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 ZNRF3Q9ULT6 936 aa6.8□□□□□ -1.32
TUBD1-207ENST00000587476 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
TUBD1-207ENST00000587476 ESRRAP11474 423 aaPredicted RBP6.79□□□□□ -1.32
TUBD1-207ENST00000587476 ADH7P40394 386 aa6.79□□□□□ -1.32
TUBD1-207ENST00000587476 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
TUBD1-207ENST00000587476 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
TUBD1-207ENST00000587476 IKBKEQ14164 716 aa6.79□□□□□ -1.32
TUBD1-207ENST00000587476 GK5Q6ZS86 529 aa6.79□□□□□ -1.32
TUBD1-207ENST00000587476 SV2AQ7L0J3 742 aa6.79□□□□□ -1.32
TUBD1-207ENST00000587476 ADARB2-AS1A8MUL3 147 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 TRIM37O94972 964 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 ARAFP10398 606 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 ADH6P28332 368 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 CDC27P30260 824 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 RPL6Q02878 288 aaKnown RBP6.78□□□□□ -1.32
TUBD1-207ENST00000587476 VWA5B2Q8N398 1253 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 FAM169BQ8N8A8 192 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 STK35Q8TDR2 534 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 GAL3ST3Q96A11 431 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 LPIN3Q9BQK8 851 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 LACRTQ9GZZ8 138 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 CCDC113Q9H0I3 377 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 NAGPAQ9UK23 515 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 TRIM33Q9UPN9 1127 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 MSRB2Q9Y3D2 182 aa6.78□□□□□ -1.32
TUBD1-207ENST00000587476 CCDC85CA6NKD9 419 aa6.77□□□□□ -1.33
TUBD1-207ENST00000587476 C2CD2LO14523 706 aa6.77□□□□□ -1.33
TUBD1-207ENST00000587476 PPFIA3O75145 1194 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms