RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 RSBN1LQ6PCB5 846 aaPredicted RBP18.01■□□□□ 0.47
NFIX-208ENST00000587260 DZIP1Q86YF9 867 aaKnown RBP18.01■□□□□ 0.47
NFIX-208ENST00000587260 KIAA0825Q8IV33 1275 aa18.01■□□□□ 0.47
NFIX-208ENST00000587260 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.01■□□□□ 0.471e-6■■■■□ 20.5
NFIX-208ENST00000587260 IGSF3O75054 1194 aa18■□□□□ 0.47
NFIX-208ENST00000587260 SLC9C2Q5TAH2 1124 aa18■□□□□ 0.47
NFIX-208ENST00000587260 SPTY2D1Q68D10 685 aaPredicted RBP18■□□□□ 0.47
NFIX-208ENST00000587260 MAGEB6Q8N7X4 407 aa18■□□□□ 0.47
NFIX-208ENST00000587260 RUFY2Q8WXA3 655 aa18■□□□□ 0.47
NFIX-208ENST00000587260 ESYT1Q9BSJ8 1104 aa18■□□□□ 0.47
NFIX-208ENST00000587260 TSHZ2Q9NRE2 1034 aa18■□□□□ 0.47
NFIX-208ENST00000587260 ZFYP08048 801 aaPredicted RBP17.99■□□□□ 0.47
NFIX-208ENST00000587260 VIL1P09327 827 aaKnown RBP17.99■□□□□ 0.47
NFIX-208ENST00000587260 PDE6AP16499 860 aa17.99■□□□□ 0.47
NFIX-208ENST00000587260 MECOMQ03112 1051 aa17.99■□□□□ 0.47
NFIX-208ENST00000587260 TNIP1Q15025 636 aa17.99■□□□□ 0.47
NFIX-208ENST00000587260 DIAPH3Q9NSV4 1193 aa17.99■□□□□ 0.47
NFIX-208ENST00000587260 TTF2Q9UNY4 1162 aaKnown RBP17.99■□□□□ 0.47
NFIX-208ENST00000587260 SGSM2O43147 1006 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 FKBP1AP62942 108 aaKnown RBP17.98■□□□□ 0.47
NFIX-208ENST00000587260 DIXDC1Q155Q3 683 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 ZNF384Q8TF68 577 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 NSUN4Q96CB9 384 aaKnown RBP17.98■□□□□ 0.47
NFIX-208ENST00000587260 MYO3BQ8WXR4 1341 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 RAD50Q92878 1312 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 ZNF532Q9HCE3 1301 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
NFIX-208ENST00000587260 EPB41L2O43491 1005 aaKnown RBP17.98■□□□□ 0.47
NFIX-208ENST00000587260 ADD2P35612 726 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 SCNN1DP51172 638 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 NAA16Q6N069 864 aaPredicted RBP17.98■□□□□ 0.47
NFIX-208ENST00000587260 ZSCAN25Q6NSZ9 544 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 FAM227BQ96M60 508 aa17.98■□□□□ 0.47
NFIX-208ENST00000587260 REC8O95072 547 aa17.97■□□□□ 0.47
NFIX-208ENST00000587260 NMIQ13287 307 aaPredicted RBP17.97■□□□□ 0.47
NFIX-208ENST00000587260 TMED8Q6PL24 325 aaPredicted RBP17.97■□□□□ 0.47
NFIX-208ENST00000587260 CWC27Q6UX04 472 aaKnown RBP17.97■□□□□ 0.47
NFIX-208ENST00000587260 ADGRA1Q86SQ6 560 aa17.97■□□□□ 0.47
NFIX-208ENST00000587260 A0A0D9SFI3 127 aa17.96■□□□□ 0.47
NFIX-208ENST00000587260 CYP7A1P22680 504 aa17.96■□□□□ 0.47
NFIX-208ENST00000587260 GMPSP49915 693 aaPredicted RBP17.96■□□□□ 0.47
NFIX-208ENST00000587260 ZMYM1Q5SVZ6 1142 aa17.96■□□□□ 0.47
NFIX-208ENST00000587260 HELLSQ9NRZ9 838 aa17.96■□□□□ 0.47
NFIX-208ENST00000587260 SUGT1Q9Y2Z0 365 aa17.96■□□□□ 0.47
NFIX-208ENST00000587260 MAST3O60307 1309 aa17.96■□□□□ 0.47
NFIX-208ENST00000587260 TCRBV5S4A2TA0A5A2 114 aa17.95■□□□□ 0.46
NFIX-208ENST00000587260 DDNO94850 711 aaPredicted RBP17.95■□□□□ 0.46
NFIX-208ENST00000587260 UBE3CQ15386 1083 aa17.95■□□□□ 0.46
NFIX-208ENST00000587260 GPC2Q8N158 579 aa17.95■□□□□ 0.46
NFIX-208ENST00000587260 AGBL3Q8NEM8 1001 aa17.95■□□□□ 0.46
NFIX-208ENST00000587260 SEC62Q99442 399 aaKnown RBP17.95■□□□□ 0.46
NFIX-208ENST00000587260 GMLQ99445 158 aa17.95■□□□□ 0.46
NFIX-208ENST00000587260 IL25Q9H293 177 aa17.95■□□□□ 0.46
NFIX-208ENST00000587260 UPF2Q9HAU5 1272 aaKnown RBP17.95■□□□□ 0.46
NFIX-208ENST00000587260 ECM29Q5VYK3 1845 aa17.95■□□□□ 0.46
NFIX-208ENST00000587260 SHTN1A0MZ66 631 aa17.94■□□□□ 0.46
NFIX-208ENST00000587260 MFAP1P55081 439 aaKnown RBP17.94■□□□□ 0.46
NFIX-208ENST00000587260 MIGA1Q8NAN2 632 aa17.94■□□□□ 0.46
NFIX-208ENST00000587260 APPBP2Q92624 585 aa17.94■□□□□ 0.46
NFIX-208ENST00000587260 MROH7-TTC4A0A0A0MT08 1334 aa17.94■□□□□ 0.46
NFIX-208ENST00000587260 ZC3H4Q9UPT8 1303 aaKnown RBP17.94■□□□□ 0.46
NFIX-208ENST00000587260 CDK5RAP2Q96SN8 1893 aa17.94■□□□□ 0.46
NFIX-208ENST00000587260 M0R2C6 588 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 GSTO1P78417 241 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 MCMDC2Q4G0Z9 681 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 CCDC129Q6ZRS4 1044 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 USP26Q9BXU7 913 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 PCDHAC2Q9Y5I4 1007 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 USP17L8P0C7I0 530 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 RPS12P25398 132 aaKnown RBP17.93■□□□□ 0.46
NFIX-208ENST00000587260 CRKP46108 304 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 RBM5P52756 815 aaKnown RBP eCLIP17.93■□□□□ 0.46
NFIX-208ENST00000587260 MICALL2Q8IY33 904 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 OSBP2Q969R2 916 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 TEKT1Q969V4 418 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 PUS7LQ9H0K6 701 aaKnown RBP17.93■□□□□ 0.46
NFIX-208ENST00000587260 AATFQ9NY61 560 aaKnown RBP eCLIP17.93■□□□□ 0.46
NFIX-208ENST00000587260 HDAC9Q9UKV0 1011 aa17.93■□□□□ 0.46
NFIX-208ENST00000587260 SLF2Q8IX21 1173 aa17.92■□□□□ 0.46
NFIX-208ENST00000587260 OGFOD1Q8N543 542 aa17.92■□□□□ 0.46
NFIX-208ENST00000587260 DAGLAQ9Y4D2 1042 aa17.92■□□□□ 0.46
NFIX-208ENST00000587260 MAGEB6P1A0A0J9YX57 407 aa17.91■□□□□ 0.46
NFIX-208ENST00000587260 GAKO14976 1311 aa17.91■□□□□ 0.46
NFIX-208ENST00000587260 MBD4O95243 580 aa17.91■□□□□ 0.46
NFIX-208ENST00000587260 BTDP43251 543 aa17.91■□□□□ 0.46
NFIX-208ENST00000587260 RBM25P49756 843 aaKnown RBP17.91■□□□□ 0.46
NFIX-208ENST00000587260 DYNLL1P63167 89 aaKnown RBP17.91■□□□□ 0.46
NFIX-208ENST00000587260 CFAP100Q494V2 611 aa17.91■□□□□ 0.46
NFIX-208ENST00000587260 FOCADQ5VW36 1801 aa17.91■□□□□ 0.46
NFIX-208ENST00000587260 DPY19L2Q6NUT2 758 aa17.91■□□□□ 0.46
NFIX-208ENST00000587260 ZNF589Q86UQ0 364 aaPredicted RBP17.91■□□□□ 0.46
NFIX-208ENST00000587260 TBC1D32Q96NH3 1257 aa17.91■□□□□ 0.46
NFIX-208ENST00000587260 NAV1Q8NEY1 1877 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 LDHCP07864 332 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 KIAA1211Q6ZU35 1233 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 LCORLQ8N3X6 602 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 DPF2Q92785 391 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 AIDAQ96BJ3 306 aa17.9■□□□□ 0.46
NFIX-208ENST00000587260 NOL10Q9BSC4 688 aaKnown RBP17.9■□□□□ 0.46
NFIX-208ENST00000587260 C22orf23Q9BZE7 217 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms