RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 LRRFIP2Q9Y608 721 aaKnown RBP13.28□□□□□ -0.28
ZNF540-205ENST00000587220 MYH13Q9UKX3 1938 aa13.28□□□□□ -0.28
ZNF540-205ENST00000587220 CIAO1O76071 339 aa13.27□□□□□ -0.29
ZNF540-205ENST00000587220 IREB2P48200 963 aaKnown RBP13.27□□□□□ -0.29
ZNF540-205ENST00000587220 RFX5P48382 616 aaPredicted RBP13.27□□□□□ -0.29
ZNF540-205ENST00000587220 LDLRAD1Q5T700 205 aa13.27□□□□□ -0.29
ZNF540-205ENST00000587220 NBPF12Q5TAG4 269 aaPredicted RBP13.27□□□□□ -0.29
ZNF540-205ENST00000587220 CEP126Q9P2H0 1117 aa13.27□□□□□ -0.29
ZNF540-205ENST00000587220 FBXO3Q9UK99 471 aa13.27□□□□□ -0.29
ZNF540-205ENST00000587220 MAST3O60307 1309 aa13.27□□□□□ -0.29
ZNF540-205ENST00000587220 AOX1Q06278 1338 aa13.27□□□□□ -0.29
ZNF540-205ENST00000587220 SSC5DA1L4H1 1573 aa13.26□□□□□ -0.29
ZNF540-205ENST00000587220 TCP10L2B9ZVM9 353 aa13.26□□□□□ -0.29
ZNF540-205ENST00000587220 GNAI3P08754 354 aa13.26□□□□□ -0.29
ZNF540-205ENST00000587220 FGFR2P21802 821 aa13.26□□□□□ -0.29
ZNF540-205ENST00000587220 IL15P40933 162 aaPredicted RBP13.26□□□□□ -0.29
ZNF540-205ENST00000587220 HDLBPQ00341 1268 aaKnown RBP13.26□□□□□ -0.29
ZNF540-205ENST00000587220 HNRNPUQ00839 825 aaKnown RBP eCLIP13.26□□□□□ -0.29
ZNF540-205ENST00000587220 ATP2B3Q16720 1220 aa13.26□□□□□ -0.29
ZNF540-205ENST00000587220 SPRYD7Q5W111 196 aa13.26□□□□□ -0.29
ZNF540-205ENST00000587220 ATG9AQ7Z3C6 839 aa13.26□□□□□ -0.29
ZNF540-205ENST00000587220 MEIS3Q99687 375 aa13.26□□□□□ -0.29
ZNF540-205ENST00000587220 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
ZNF540-205ENST00000587220 TMOD2Q9NZR1 351 aa13.26□□□□□ -0.29
ZNF540-205ENST00000587220 UNCXA6NJT0 531 aa13.25□□□□□ -0.29
ZNF540-205ENST00000587220 TBC1D8O95759 1140 aa13.25□□□□□ -0.29
ZNF540-205ENST00000587220 TM4SF4P48230 202 aa13.25□□□□□ -0.29
ZNF540-205ENST00000587220 GRIK5Q16478 980 aa13.25□□□□□ -0.29
ZNF540-205ENST00000587220 MAP3K11Q16584 847 aa13.25□□□□□ -0.29
ZNF540-205ENST00000587220 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
ZNF540-205ENST00000587220 WDR66Q8TBY9 1149 aa13.25□□□□□ -0.29
ZNF540-205ENST00000587220 CLMNQ96JQ2 1002 aa13.25□□□□□ -0.29
ZNF540-205ENST00000587220 SUGT1Q9Y2Z0 365 aa13.25□□□□□ -0.29
ZNF540-205ENST00000587220 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
ZNF540-205ENST00000587220 SRGAP3O43295 1099 aa13.24□□□□□ -0.29
ZNF540-205ENST00000587220 ZBTB48P10074 688 aaPredicted RBP13.24□□□□□ -0.29
ZNF540-205ENST00000587220 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
ZNF540-205ENST00000587220 MIER1Q8N108 512 aa13.24□□□□□ -0.29
ZNF540-205ENST00000587220 ZDHHC15Q96MV8 337 aa13.24□□□□□ -0.29
ZNF540-205ENST00000587220 USP2O75604 605 aaPredicted RBP13.23□□□□□ -0.29
ZNF540-205ENST00000587220 BCAR3O75815 825 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 ALDH1A1P00352 501 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 TRIM27P14373 513 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 CACNB3P54284 484 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 INHBEP58166 350 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 ATF7IPQ6VMQ6 1270 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 CTU1Q7Z7A3 348 aaKnown RBP13.23□□□□□ -0.29
ZNF540-205ENST00000587220 CLUAP1Q96AJ1 413 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 WNK4Q96J92 1243 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 TMEM39BQ9GZU3 492 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 COPRSQ9NQ92 184 aa13.23□□□□□ -0.29
ZNF540-205ENST00000587220 PA2G4Q9UQ80 394 aaKnown RBP13.23□□□□□ -0.29
ZNF540-205ENST00000587220 HOOK2Q96ED9 719 aa13.22□□□□□ -0.29
ZNF540-205ENST00000587220 MRIQ9BWK5 157 aa13.22□□□□□ -0.29
ZNF540-205ENST00000587220 ELP3Q9H9T3 547 aa13.22□□□□□ -0.29
ZNF540-205ENST00000587220 GTF3C3Q9Y5Q9 886 aa13.22□□□□□ -0.29
ZNF540-205ENST00000587220 SEMA3EO15041 775 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 GNAI2P04899 355 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
ZNF540-205ENST00000587220 ZKSCAN2Q63HK3 967 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 OTUD7BQ6GQQ9 843 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 IFNL1Q8IU54 200 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 ZNF296Q8WUU4 475 aaPredicted RBP13.21□□□□□ -0.29
ZNF540-205ENST00000587220 TEPSINQ96N21 525 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 DENND2AQ9ULE3 1009 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 AKAP2Q9Y2D5 859 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 CSADQ9Y600 493 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 OTOFQ9HC10 1997 aa13.21□□□□□ -0.29
ZNF540-205ENST00000587220 GPR25O00155 361 aa13.2□□□□□ -0.3
ZNF540-205ENST00000587220 PHKA1P46020 1223 aa13.2□□□□□ -0.3
ZNF540-205ENST00000587220 APOBEC3HQ6NTF7 200 aaKnown RBP13.2□□□□□ -0.3
ZNF540-205ENST00000587220 FAM83AQ86UY5 434 aa13.2□□□□□ -0.3
ZNF540-205ENST00000587220 FTSJ3Q8IY81 847 aaKnown RBP13.2□□□□□ -0.3
ZNF540-205ENST00000587220 ZGPATQ8N5A5 531 aaKnown RBP13.2□□□□□ -0.3
ZNF540-205ENST00000587220 OPTNQ96CV9 577 aa13.2□□□□□ -0.3
ZNF540-205ENST00000587220 PRDX5P30044 214 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 ADORA1P30542 326 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 TIMM10P62072 90 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 MAP3K9P80192 1104 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 TFCP2Q12800 502 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 MTX1Q13505 466 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 VGLL4Q14135 290 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 DIXDC1Q155Q3 683 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 PKN2Q16513 984 aaKnown RBP13.19□□□□□ -0.3
ZNF540-205ENST00000587220 NOM1Q5C9Z4 860 aaKnown RBP13.19□□□□□ -0.3
ZNF540-205ENST00000587220 GORABQ5T7V8 394 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 FKBP1CQ5VVH2 108 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 CCDC102BQ68D86 513 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 NEUROD6Q96NK8 337 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 TNNQ9UQP3 1299 aa13.19□□□□□ -0.3
ZNF540-205ENST00000587220 LAMB1P07942 1786 aa13.18□□□□□ -0.3
ZNF540-205ENST00000587220 A0A1B0GUL7 405 aa13.18□□□□□ -0.3
ZNF540-205ENST00000587220 FKTNO75072 461 aa13.18□□□□□ -0.3
ZNF540-205ENST00000587220 MLLT1Q03111 559 aaPredicted RBP13.18□□□□□ -0.3
ZNF540-205ENST00000587220 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
ZNF540-205ENST00000587220 DCAF15Q66K64 600 aa13.18□□□□□ -0.3
ZNF540-205ENST00000587220 DZIP1Q86YF9 867 aaKnown RBP13.18□□□□□ -0.3
ZNF540-205ENST00000587220 TMEM57Q8N5G2 664 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms