RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 USP2O75604 605 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-206ENST00000586863 PDE8BO95263 885 aa17.59■□□□□ 0.41
ATG4D-206ENST00000586863 ZBTB48P10074 688 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-206ENST00000586863 GJA5P36382 358 aa17.59■□□□□ 0.41
ATG4D-206ENST00000586863 IGF2BP3O00425 579 aaKnown RBP eCLIP17.58■□□□□ 0.4
ATG4D-206ENST00000586863 IREB2P48200 963 aaKnown RBP17.58■□□□□ 0.4
ATG4D-206ENST00000586863 TNFAIP1Q13829 316 aa17.58■□□□□ 0.4
ATG4D-206ENST00000586863 IFNL1Q8IU54 200 aa17.58■□□□□ 0.4
ATG4D-206ENST00000586863 TEPSINQ96N21 525 aa17.58■□□□□ 0.4
ATG4D-206ENST00000586863 BRCA2P51587 3418 aa17.57■□□□□ 0.4
ATG4D-206ENST00000586863 UNCXA6NJT0 531 aa17.57■□□□□ 0.4
ATG4D-206ENST00000586863 TCP10L2B9ZVM9 353 aa17.57■□□□□ 0.4
ATG4D-206ENST00000586863 FKTNO75072 461 aa17.57■□□□□ 0.4
ATG4D-206ENST00000586863 RFX5P48382 616 aaPredicted RBP17.57■□□□□ 0.4
ATG4D-206ENST00000586863 BCAMP50895 628 aa17.57■□□□□ 0.4
ATG4D-206ENST00000586863 PKN2Q16513 984 aaKnown RBP17.57■□□□□ 0.4
ATG4D-206ENST00000586863 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
ATG4D-206ENST00000586863 CAVIN4Q5BKX8 364 aa17.57■□□□□ 0.4
ATG4D-206ENST00000586863 TMEM39BQ9GZU3 492 aa17.57■□□□□ 0.4
ATG4D-206ENST00000586863 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
ATG4D-206ENST00000586863 KIAA0100Q14667 2235 aaKnown RBP17.57■□□□□ 0.4
ATG4D-206ENST00000586863 MKI67P46013 3256 aaKnown RBP17.57■□□□□ 0.4
ATG4D-206ENST00000586863 FRAT2O75474 233 aaPredicted RBP17.56■□□□□ 0.4
ATG4D-206ENST00000586863 ALDH1A1P00352 501 aa17.56■□□□□ 0.4
ATG4D-206ENST00000586863 FGFR2P21802 821 aa17.56■□□□□ 0.4
ATG4D-206ENST00000586863 PUM3Q15397 648 aaKnown RBP17.56■□□□□ 0.4
ATG4D-206ENST00000586863 ANKRD13AQ8IZ07 590 aa17.56■□□□□ 0.4
ATG4D-206ENST00000586863 TBC1D22AQ8WUA7 517 aa17.56■□□□□ 0.4
ATG4D-206ENST00000586863 INHBEP58166 350 aa17.55■□□□□ 0.4
ATG4D-206ENST00000586863 TRMT2AQ8IZ69 625 aaKnown RBP17.55■□□□□ 0.4
ATG4D-206ENST00000586863 ELP3Q9H9T3 547 aa17.55■□□□□ 0.4
ATG4D-206ENST00000586863 KIF16BQ96L93 1317 aa17.54■□□□□ 0.4
ATG4D-206ENST00000586863 EYA2O00167 538 aa17.54■□□□□ 0.4
ATG4D-206ENST00000586863 IFIT1P09914 478 aaKnown RBP17.54■□□□□ 0.4
ATG4D-206ENST00000586863 CACNB3P54284 484 aa17.54■□□□□ 0.4
ATG4D-206ENST00000586863 HDLBPQ00341 1268 aaKnown RBP17.54■□□□□ 0.4
ATG4D-206ENST00000586863 FBXO46Q6PJ61 603 aaPredicted RBP17.54■□□□□ 0.4
ATG4D-206ENST00000586863 TEKT1Q969V4 418 aa17.54■□□□□ 0.4
ATG4D-206ENST00000586863 TNNI2P48788 182 aa17.53■□□□□ 0.4
ATG4D-206ENST00000586863 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.53■□□□□ 0.4
ATG4D-206ENST00000586863 CNKSR2Q8WXI2 1034 aa17.53■□□□□ 0.4
ATG4D-206ENST00000586863 OPTNQ96CV9 577 aa17.53■□□□□ 0.4
ATG4D-206ENST00000586863 PTPN18Q99952 460 aa17.53■□□□□ 0.4
ATG4D-206ENST00000586863 CRHR2Q13324 411 aa17.52■□□□□ 0.4
ATG4D-206ENST00000586863 VGLL4Q14135 290 aa17.52■□□□□ 0.4
ATG4D-206ENST00000586863 ATG9AQ7Z3C6 839 aa17.52■□□□□ 0.4
ATG4D-206ENST00000586863 ZDHHC15Q96MV8 337 aa17.52■□□□□ 0.4
ATG4D-206ENST00000586863 TESPA1A2RU30 521 aaPredicted RBP17.51■□□□□ 0.39
ATG4D-206ENST00000586863 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
ATG4D-206ENST00000586863 SLC5A1P13866 664 aa17.51■□□□□ 0.39
ATG4D-206ENST00000586863 APOBEC3HQ6NTF7 200 aaKnown RBP17.51■□□□□ 0.39
ATG4D-206ENST00000586863 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.51■□□□□ 0.39
ATG4D-206ENST00000586863 LPIN2Q92539 896 aa17.51■□□□□ 0.39
ATG4D-206ENST00000586863 SIL1Q9H173 461 aa17.51■□□□□ 0.39
ATG4D-206ENST00000586863 NOB1Q9ULX3 412 aaKnown RBP17.51■□□□□ 0.39
ATG4D-206ENST00000586863 SUGT1Q9Y2Z0 365 aa17.51■□□□□ 0.39
ATG4D-206ENST00000586863 MAP3K9P80192 1104 aa17.5■□□□□ 0.39
ATG4D-206ENST00000586863 MS4A4AQ96JQ5 239 aa17.5■□□□□ 0.39
ATG4D-206ENST00000586863 MRIQ9BWK5 157 aa17.5■□□□□ 0.39
ATG4D-206ENST00000586863 TRIM17Q9Y577 477 aa17.5■□□□□ 0.39
ATG4D-206ENST00000586863 MAST3O60307 1309 aa17.49■□□□□ 0.39
ATG4D-206ENST00000586863 AK9Q5TCS8 1911 aa17.49■□□□□ 0.39
ATG4D-206ENST00000586863 CT47B1P0C2W7 299 aaPredicted RBP17.49■□□□□ 0.39
ATG4D-206ENST00000586863 OTUD7BQ6GQQ9 843 aa17.49■□□□□ 0.39
ATG4D-206ENST00000586863 OTOP1Q7RTM1 612 aa17.49■□□□□ 0.39
ATG4D-206ENST00000586863 BRI3BPQ8WY22 251 aa17.49■□□□□ 0.39
ATG4D-206ENST00000586863 TMOD2Q9NZR1 351 aa17.49■□□□□ 0.39
ATG4D-206ENST00000586863 LRRFIP2Q9Y608 721 aaKnown RBP17.49■□□□□ 0.39
ATG4D-206ENST00000586863 CIAO1O76071 339 aa17.48■□□□□ 0.39
ATG4D-206ENST00000586863 CAP1Q01518 475 aa17.48■□□□□ 0.39
ATG4D-206ENST00000586863 HHIPL2Q6UWX4 724 aa17.48■□□□□ 0.39
ATG4D-206ENST00000586863 FAM83AQ86UY5 434 aa17.48■□□□□ 0.39
ATG4D-206ENST00000586863 WDR66Q8TBY9 1149 aa17.48■□□□□ 0.39
ATG4D-206ENST00000586863 CD99L2Q8TCZ2 262 aa17.48■□□□□ 0.39
ATG4D-206ENST00000586863 PA2G4Q9UQ80 394 aaKnown RBP17.48■□□□□ 0.39
ATG4D-206ENST00000586863 CSADQ9Y600 493 aa17.48■□□□□ 0.39
ATG4D-206ENST00000586863 RPAP1Q9BWH6 1393 aaPredicted RBP17.48■□□□□ 0.39
ATG4D-206ENST00000586863 ATP2B3Q16720 1220 aa17.47■□□□□ 0.39
ATG4D-206ENST00000586863 FKBP1CQ5VVH2 108 aa17.47■□□□□ 0.39
ATG4D-206ENST00000586863 OTUD5Q96G74 571 aa17.47■□□□□ 0.39
ATG4D-206ENST00000586863 MEIS3Q99687 375 aa17.47■□□□□ 0.39
ATG4D-206ENST00000586863 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
ATG4D-206ENST00000586863 FBXO3Q9UK99 471 aa17.47■□□□□ 0.39
ATG4D-206ENST00000586863 SNCAIPQ9Y6H5 919 aa17.47■□□□□ 0.39
ATG4D-206ENST00000586863 MYH2Q9UKX2 1941 aa17.47■□□□□ 0.39
ATG4D-206ENST00000586863 CCL15-CCL14A0A0B4J2E2 113 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 SPDYE5A6NIY4 337 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 SLC34A2O95436 690 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 PRDX5P30044 214 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 DIXDC1Q155Q3 683 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 CCL15Q16663 113 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 ERO1AQ96HE7 468 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 WRNIP1Q96S55 665 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 CEP126Q9P2H0 1117 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 DAGLAQ9Y4D2 1042 aa17.46■□□□□ 0.39
ATG4D-206ENST00000586863 PHKA1P46020 1223 aa17.45■□□□□ 0.38
ATG4D-206ENST00000586863 GTF2A2P52657 109 aa17.45■□□□□ 0.38
ATG4D-206ENST00000586863 RARSP54136 660 aaKnown RBP17.45■□□□□ 0.38
ATG4D-206ENST00000586863 FAM43AQ8N2R8 423 aa17.45■□□□□ 0.38
ATG4D-206ENST00000586863 ZKSCAN4Q969J2 545 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms