RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 SPDYE6P0CI01 402 aa17.24■□□□□ 0.35
TPM4-205ENST00000586833 NF2P35240 595 aa17.24■□□□□ 0.35
TPM4-205ENST00000586833 USP48Q86UV5 1035 aa17.24■□□□□ 0.35
TPM4-205ENST00000586833 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
TPM4-205ENST00000586833 GLIS2Q9BZE0 524 aaPredicted RBP17.24■□□□□ 0.35
TPM4-205ENST00000586833 DBNLQ9UJU6 430 aaKnown RBP17.24■□□□□ 0.35
TPM4-205ENST00000586833 PASKQ96RG2 1323 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 HDAC1Q13547 482 aaPredicted RBP17.23■□□□□ 0.35
TPM4-205ENST00000586833 NBPF9Q3BBW0 867 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 HHIPL2Q6UWX4 724 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 HMG20BQ9P0W2 317 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 LRP2BPQ9P2M1 347 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 PCDHB15Q9Y5E8 787 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 PPP2R3BQ9Y5P8 575 aa17.23■□□□□ 0.35
TPM4-205ENST00000586833 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
TPM4-205ENST00000586833 LDHCP07864 332 aa17.22■□□□□ 0.35
TPM4-205ENST00000586833 TNNI2P48788 182 aa17.22■□□□□ 0.35
TPM4-205ENST00000586833 ZBED3Q96IU2 234 aaPredicted RBP17.22■□□□□ 0.35
TPM4-205ENST00000586833 ZDHHC15Q96MV8 337 aa17.22■□□□□ 0.35
TPM4-205ENST00000586833 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
TPM4-205ENST00000586833 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.22■□□□□ 0.35
TPM4-205ENST00000586833 CELF2O95319 508 aaKnown RBP17.21■□□□□ 0.35
TPM4-205ENST00000586833 TTF1Q15361 905 aaPredicted RBP17.21■□□□□ 0.35
TPM4-205ENST00000586833 TMED8Q6PL24 325 aaPredicted RBP17.21■□□□□ 0.35
TPM4-205ENST00000586833 EXOC6Q8TAG9 804 aa17.21■□□□□ 0.35
TPM4-205ENST00000586833 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.21■□□□□ 0.35
TPM4-205ENST00000586833 NOL10Q9BSC4 688 aaKnown RBP17.21■□□□□ 0.35
TPM4-205ENST00000586833 RAI14Q9P0K7 980 aa17.21■□□□□ 0.35
TPM4-205ENST00000586833 SCN9AQ15858 1988 aa17.2■□□□□ 0.34
TPM4-205ENST00000586833 PRDX5P30044 214 aa17.2■□□□□ 0.34
TPM4-205ENST00000586833 MCAMP43121 646 aa17.2■□□□□ 0.34
TPM4-205ENST00000586833 C2orf69Q8N8R5 385 aa17.2■□□□□ 0.34
TPM4-205ENST00000586833 ZNF408Q9H9D4 720 aa17.2■□□□□ 0.34
TPM4-205ENST00000586833 TLR7Q9NYK1 1049 aaKnown RBP17.2■□□□□ 0.34
TPM4-205ENST00000586833 ABT1Q9ULW3 272 aaKnown RBP17.2■□□□□ 0.34
TPM4-205ENST00000586833 COL1A1P02452 1464 aaPredicted RBP17.19■□□□□ 0.34
TPM4-205ENST00000586833 ADM5C9JUS6 153 aa17.19■□□□□ 0.34
TPM4-205ENST00000586833 SPDYE2Q495Y8 402 aa17.19■□□□□ 0.34
TPM4-205ENST00000586833 PRMT6Q96LA8 375 aaPredicted RBP17.19■□□□□ 0.34
TPM4-205ENST00000586833 ADAMTSL1Q8N6G6 1762 aa17.19■□□□□ 0.34
TPM4-205ENST00000586833 CLRN2A0PK11 232 aa17.18■□□□□ 0.34
TPM4-205ENST00000586833 TRAF5O00463 557 aa17.18■□□□□ 0.34
TPM4-205ENST00000586833 MAP4K4O95819 1239 aaPredicted RBP17.18■□□□□ 0.34
TPM4-205ENST00000586833 MAP3K12Q12852 859 aa17.18■□□□□ 0.34
TPM4-205ENST00000586833 SUPT20HL1Q3ZLR7 823 aa17.18■□□□□ 0.34
TPM4-205ENST00000586833 CDCA5Q96FF9 252 aa17.18■□□□□ 0.34
TPM4-205ENST00000586833 SNRKQ9NRH2 765 aa17.18■□□□□ 0.34
TPM4-205ENST00000586833 ZNF70Q9UC06 446 aaPredicted RBP17.18■□□□□ 0.34
TPM4-205ENST00000586833 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
TPM4-205ENST00000586833 PSME4Q14997 1843 aa17.17■□□□□ 0.34
TPM4-205ENST00000586833 FKBP1BP68106 108 aa17.17■□□□□ 0.34
TPM4-205ENST00000586833 GRIK5Q16478 980 aa17.17■□□□□ 0.34
TPM4-205ENST00000586833 CERS3Q8IU89 383 aa17.17■□□□□ 0.34
TPM4-205ENST00000586833 HOOK2Q96ED9 719 aa17.17■□□□□ 0.34
TPM4-205ENST00000586833 DEFB129Q9H1M3 183 aa17.17■□□□□ 0.34
TPM4-205ENST00000586833 TDRD3Q9H7E2 651 aaKnown RBP17.17■□□□□ 0.34
TPM4-205ENST00000586833 ERC2O15083 957 aa17.16■□□□□ 0.34
TPM4-205ENST00000586833 BAG3O95817 575 aa17.16■□□□□ 0.34
TPM4-205ENST00000586833 ATP5JP18859 108 aa17.16■□□□□ 0.34
TPM4-205ENST00000586833 ZAP70P43403 619 aa17.16■□□□□ 0.34
TPM4-205ENST00000586833 ANKRD45Q5TZF3 282 aa17.16■□□□□ 0.34
TPM4-205ENST00000586833 FKBP1CQ5VVH2 108 aa17.16■□□□□ 0.34
TPM4-205ENST00000586833 NAA16Q6N069 864 aaPredicted RBP17.16■□□□□ 0.34
TPM4-205ENST00000586833 FAM163AQ96GL9 167 aaPredicted RBP17.16■□□□□ 0.34
TPM4-205ENST00000586833 GBA2Q9HCG7 927 aaPredicted RBP17.16■□□□□ 0.34
TPM4-205ENST00000586833 ECHDC1Q9NTX5 307 aa17.16■□□□□ 0.34
TPM4-205ENST00000586833 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
TPM4-205ENST00000586833 ARAP2Q8WZ64 1704 aa17.16■□□□□ 0.34
TPM4-205ENST00000586833 SMARCA5O60264 1052 aaPredicted RBP17.15■□□□□ 0.34
TPM4-205ENST00000586833 NEFLP07196 543 aa17.15■□□□□ 0.34
TPM4-205ENST00000586833 PLCG2P16885 1265 aa17.15■□□□□ 0.34
TPM4-205ENST00000586833 MECOMQ03112 1051 aa17.15■□□□□ 0.34
TPM4-205ENST00000586833 TTLL12Q14166 644 aaPredicted RBP17.15■□□□□ 0.34
TPM4-205ENST00000586833 DIXDC1Q155Q3 683 aa17.15■□□□□ 0.34
TPM4-205ENST00000586833 APOBEC3HQ6NTF7 200 aaKnown RBP17.15■□□□□ 0.34
TPM4-205ENST00000586833 PI16Q6UXB8 463 aa17.15■□□□□ 0.34
TPM4-205ENST00000586833 TBC1D9Q6ZT07 1266 aa17.15■□□□□ 0.34
TPM4-205ENST00000586833 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
TPM4-205ENST00000586833 USP40Q9NVE5 1235 aa17.15■□□□□ 0.34
TPM4-205ENST00000586833 MROH7-TTC4A0A0A0MT08 1334 aa17.15■□□□□ 0.34
TPM4-205ENST00000586833 GAKO14976 1311 aa17.15■□□□□ 0.34
TPM4-205ENST00000586833 PPP1R12BO60237 982 aaPredicted RBP17.14■□□□□ 0.33
TPM4-205ENST00000586833 IDH1O75874 414 aaKnown RBP17.14■□□□□ 0.33
TPM4-205ENST00000586833 CYP2E1P05181 493 aaPredicted RBP17.14■□□□□ 0.33
TPM4-205ENST00000586833 ECE1P42892 770 aa17.14■□□□□ 0.33
TPM4-205ENST00000586833 RASA3Q14644 834 aa17.14■□□□□ 0.33
TPM4-205ENST00000586833 DEFB115Q30KQ5 88 aa17.14■□□□□ 0.33
TPM4-205ENST00000586833 LRRFIP1Q32MZ4 808 aaKnown RBP17.14■□□□□ 0.33
TPM4-205ENST00000586833 ARMC9Q7Z3E5 817 aa17.14■□□□□ 0.33
TPM4-205ENST00000586833 NSUN4Q96CB9 384 aaKnown RBP17.14■□□□□ 0.33
TPM4-205ENST00000586833 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.14■□□□□ 0.332e-11■□□□□ 8.1
TPM4-205ENST00000586833 TLL2Q9Y6L7 1015 aa17.14■□□□□ 0.33
TPM4-205ENST00000586833 TCP10L2B9ZVM9 353 aa17.13■□□□□ 0.33
TPM4-205ENST00000586833 BTDP43251 543 aa17.13■□□□□ 0.33
TPM4-205ENST00000586833 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
TPM4-205ENST00000586833 CST9Q5W186 159 aa17.13■□□□□ 0.33
TPM4-205ENST00000586833 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms