RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 RASSF10A6NK89 507 aa12.21□□□□□ -0.45
APOC1-201ENST00000586638 EIF6P56537 245 aaKnown RBP12.21□□□□□ -0.45
APOC1-201ENST00000586638 ANAPC15P60006 121 aa12.21□□□□□ -0.45
APOC1-201ENST00000586638 MAP2K1Q02750 393 aaPredicted RBP12.21□□□□□ -0.45
APOC1-201ENST00000586638 MCMDC2Q4G0Z9 681 aa12.21□□□□□ -0.45
APOC1-201ENST00000586638 CC2D2BQ6DHV5 1058 aa12.21□□□□□ -0.45
APOC1-201ENST00000586638 RASEFQ8IZ41 740 aa12.21□□□□□ -0.45
APOC1-201ENST00000586638 SPATA5Q8NB90 893 aa12.21□□□□□ -0.45
APOC1-201ENST00000586638 SPRYD3Q8NCJ5 442 aa12.21□□□□□ -0.45
APOC1-201ENST00000586638 HELLSQ9NRZ9 838 aa12.21□□□□□ -0.45
APOC1-201ENST00000586638 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.45
APOC1-201ENST00000586638 DUOX1Q9NRD9 1551 aa12.21□□□□□ -0.46
APOC1-201ENST00000586638 IRS2Q9Y4H2 1338 aa12.2□□□□□ -0.46
APOC1-201ENST00000586638 DICER1Q9UPY3 1922 aaKnown RBP12.2□□□□□ -0.46
APOC1-201ENST00000586638 IDH1O75874 414 aaKnown RBP12.2□□□□□ -0.46
APOC1-201ENST00000586638 TTF1Q15361 905 aaPredicted RBP12.2□□□□□ -0.46
APOC1-201ENST00000586638 WASHC4Q2M389 1173 aa12.2□□□□□ -0.46
APOC1-201ENST00000586638 LRRFIP1Q32MZ4 808 aaKnown RBP12.2□□□□□ -0.46
APOC1-201ENST00000586638 OSBP2Q969R2 916 aa12.2□□□□□ -0.46
APOC1-201ENST00000586638 IL17RAQ96F46 866 aa12.2□□□□□ -0.46
APOC1-201ENST00000586638 GPR101Q96P66 508 aaPredicted RBP12.2□□□□□ -0.46
APOC1-201ENST00000586638 PSMD1Q99460 953 aa12.2□□□□□ -0.46
APOC1-201ENST00000586638 ABT1Q9ULW3 272 aaKnown RBP12.2□□□□□ -0.46
APOC1-201ENST00000586638 XDHP47989 1333 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 WDR33Q9C0J8 1336 aaKnown RBP12.19□□□□□ -0.46
APOC1-201ENST00000586638 K7ELQ4 463 aaPredicted RBP12.19□□□□□ -0.46
APOC1-201ENST00000586638 PPEF1O14829 653 aaPredicted RBP12.19□□□□□ -0.46
APOC1-201ENST00000586638 SLC27A2O14975 620 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 ZFYP08048 801 aaPredicted RBP12.19□□□□□ -0.46
APOC1-201ENST00000586638 PDE6AP16499 860 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 LMOD1P29536 600 aaPredicted RBP12.19□□□□□ -0.46
APOC1-201ENST00000586638 HOXA10P31260 410 aaPredicted RBP12.19□□□□□ -0.46
APOC1-201ENST00000586638 ADD2P35612 726 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 GPSM2P81274 684 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 CREB3L3Q68CJ9 461 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 APPBP2Q92624 585 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 MAP4K1Q92918 833 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 FAM84BQ96KN1 310 aaPredicted RBP12.19□□□□□ -0.46
APOC1-201ENST00000586638 CRAMP1Q96RY5 1269 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
APOC1-201ENST00000586638 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.19□□□□□ -0.46
APOC1-201ENST00000586638 SLKQ9H2G2 1235 aaPredicted RBP12.19□□□□□ -0.46
APOC1-201ENST00000586638 ANKIB1Q9P2G1 1089 aa12.19□□□□□ -0.46
APOC1-201ENST00000586638 ST18O60284 1047 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 HSPA8P11142 646 aaKnown RBP12.18□□□□□ -0.46
APOC1-201ENST00000586638 NEK4P51957 841 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 NECTIN1Q15223 517 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 GRIPAP1Q4V328 841 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 CAVIN4Q5BKX8 364 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 TICAM2Q86XR7 235 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 VPS37DQ86XT2 251 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 LARGE2Q8N3Y3 721 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 KCNB2Q92953 911 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 GNL3LQ9NVN8 582 aaKnown RBP12.18□□□□□ -0.46
APOC1-201ENST00000586638 TAF6LQ9Y6J9 622 aa12.18□□□□□ -0.46
APOC1-201ENST00000586638 RPAP1Q9BWH6 1393 aaPredicted RBP12.18□□□□□ -0.46
APOC1-201ENST00000586638 ZNF532Q9HCE3 1301 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 TCRBV5S4A2TA0A5A2 114 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 UFL1O94874 794 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 ADCK5Q3MIX3 580 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 ZSCAN25Q6NSZ9 544 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 NOL8Q76FK4 1167 aaKnown RBP12.17□□□□□ -0.46
APOC1-201ENST00000586638 FBXO33Q7Z6M2 555 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 TXNRD3Q86VQ6 643 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 MAGEB6Q8N7X4 407 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 JAKMIP1Q96N16 626 aaKnown RBP12.17□□□□□ -0.46
APOC1-201ENST00000586638 PUS7LQ9H0K6 701 aaKnown RBP12.17□□□□□ -0.46
APOC1-201ENST00000586638 FOXD4L1Q9NU39 408 aa12.17□□□□□ -0.46
APOC1-201ENST00000586638 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
APOC1-201ENST00000586638 SCN4AP35499 1836 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 FOXP2O15409 715 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 GPAA1O43292 621 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 CPA1P15085 419 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 HIBADHP31937 336 aaKnown RBP12.16□□□□□ -0.46
APOC1-201ENST00000586638 EPS15P42566 896 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 ECE1P42892 770 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 CHAF1AQ13111 956 aaPredicted RBP12.16□□□□□ -0.46
APOC1-201ENST00000586638 USP50Q70EL3 339 aaPredicted RBP12.16□□□□□ -0.46
APOC1-201ENST00000586638 ABHD8Q96I13 439 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 BEGAINQ9BUH8 593 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 DSCC1Q9BVC3 393 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 TMX4Q9H1E5 349 aaPredicted RBP12.16□□□□□ -0.46
APOC1-201ENST00000586638 GGA1Q9UJY5 639 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 DENND2AQ9ULE3 1009 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 LEMD3Q9Y2U8 911 aa12.16□□□□□ -0.46
APOC1-201ENST00000586638 LAMB1P07942 1786 aa12.15□□□□□ -0.46
APOC1-201ENST00000586638 HSPD1P10809 573 aaKnown RBP12.15□□□□□ -0.46
APOC1-201ENST00000586638 CASTP20810 708 aaKnown RBP12.15□□□□□ -0.46
APOC1-201ENST00000586638 ATP2B4P23634 1241 aa12.15□□□□□ -0.46
APOC1-201ENST00000586638 FMR1Q06787 632 aaKnown RBP eCLIP12.15□□□□□ -0.46
APOC1-201ENST00000586638 MAP3K12Q12852 859 aa12.15□□□□□ -0.46
APOC1-201ENST00000586638 UBE3CQ15386 1083 aa12.15□□□□□ -0.46
APOC1-201ENST00000586638 PAXIP1Q6ZW49 1069 aaPredicted RBP12.15□□□□□ -0.46
APOC1-201ENST00000586638 CAPNS2Q96L46 248 aa12.15□□□□□ -0.46
APOC1-201ENST00000586638 JAG2Q9Y219 1238 aa12.15□□□□□ -0.46
APOC1-201ENST00000586638 PDS5AQ29RF7 1337 aaKnown RBP12.14□□□□□ -0.47
APOC1-201ENST00000586638 SEMA3EO15041 775 aa12.14□□□□□ -0.47
APOC1-201ENST00000586638 FRAT2O75474 233 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms