RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 MTMR14Q8NCE2 650 aa19.79■□□□□ 0.76
ATG4D-205ENST00000586477 ZIC5Q96T25 663 aa19.79■□□□□ 0.76
ATG4D-205ENST00000586477 BEGAINQ9BUH8 593 aa19.79■□□□□ 0.76
ATG4D-205ENST00000586477 EXOC6BQ9Y2D4 811 aa19.79■□□□□ 0.76
ATG4D-205ENST00000586477 AKAP2Q9Y2D5 859 aa19.79■□□□□ 0.76
ATG4D-205ENST00000586477 MYH13Q9UKX3 1938 aa19.78■□□□□ 0.76
ATG4D-205ENST00000586477 PAPPA2Q9BXP8 1791 aa19.78■□□□□ 0.76
ATG4D-205ENST00000586477 FAM155AB1AL88 458 aaPredicted RBP19.78■□□□□ 0.76
ATG4D-205ENST00000586477 BCAMP50895 628 aa19.78■□□□□ 0.76
ATG4D-205ENST00000586477 SMC5Q8IY18 1101 aa19.78■□□□□ 0.76
ATG4D-205ENST00000586477 LRRCC1Q9C099 1032 aa19.78■□□□□ 0.76
ATG4D-205ENST00000586477 HDAC9Q9UKV0 1011 aa19.78■□□□□ 0.76
ATG4D-205ENST00000586477 PUM3Q15397 648 aaKnown RBP19.77■□□□□ 0.76
ATG4D-205ENST00000586477 MFSD14BQ5SR56 506 aa19.77■□□□□ 0.76
ATG4D-205ENST00000586477 COL1A1P02452 1464 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-205ENST00000586477 MAP2K2P36507 400 aa19.76■□□□□ 0.75
ATG4D-205ENST00000586477 CFAP100Q494V2 611 aa19.76■□□□□ 0.75
ATG4D-205ENST00000586477 MOB2Q70IA6 237 aa19.76■□□□□ 0.75
ATG4D-205ENST00000586477 CLASRPQ8N2M8 674 aaKnown RBP19.76■□□□□ 0.75
ATG4D-205ENST00000586477 C2orf69Q8N8R5 385 aa19.76■□□□□ 0.75
ATG4D-205ENST00000586477 PRMT6Q96LA8 375 aaPredicted RBP19.76■□□□□ 0.75
ATG4D-205ENST00000586477 GPR108Q9NPR9 543 aa19.76■□□□□ 0.75
ATG4D-205ENST00000586477 SPDYE2BA6NHP3 402 aa19.75■□□□□ 0.75
ATG4D-205ENST00000586477 IGHDP01880 384 aa19.75■□□□□ 0.75
ATG4D-205ENST00000586477 SPDYE6P0CI01 402 aa19.75■□□□□ 0.75
ATG4D-205ENST00000586477 HSPA8P11142 646 aaKnown RBP19.75■□□□□ 0.75
ATG4D-205ENST00000586477 DLGAP5Q15398 846 aa19.75■□□□□ 0.75
ATG4D-205ENST00000586477 RHPN1Q8TCX5 695 aa19.75■□□□□ 0.75
ATG4D-205ENST00000586477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.75■□□□□ 0.75
ATG4D-205ENST00000586477 RGMBQ6NW40 437 aa19.74■□□□□ 0.75
ATG4D-205ENST00000586477 GTF3C3Q9Y5Q9 886 aa19.74■□□□□ 0.75
ATG4D-205ENST00000586477 SSC5DA1L4H1 1573 aa19.74■□□□□ 0.75
ATG4D-205ENST00000586477 IFIT1P09914 478 aaKnown RBP19.73■□□□□ 0.75
ATG4D-205ENST00000586477 CHAF1AQ13111 956 aaPredicted RBP19.73■□□□□ 0.75
ATG4D-205ENST00000586477 CAVIN4Q5BKX8 364 aa19.73■□□□□ 0.75
ATG4D-205ENST00000586477 LPIN2Q92539 896 aa19.73■□□□□ 0.75
ATG4D-205ENST00000586477 AKAP11Q9UKA4 1901 aa19.72■□□□□ 0.75
ATG4D-205ENST00000586477 CLRN2A0PK11 232 aa19.72■□□□□ 0.75
ATG4D-205ENST00000586477 SLC5A1P13866 664 aa19.72■□□□□ 0.75
ATG4D-205ENST00000586477 TFCP2Q12800 502 aa19.72■□□□□ 0.75
ATG4D-205ENST00000586477 ATP2B3Q16720 1220 aa19.72■□□□□ 0.75
ATG4D-205ENST00000586477 B4GALNT3Q6L9W6 998 aa19.72■□□□□ 0.75
ATG4D-205ENST00000586477 VPS37DQ86XT2 251 aa19.72■□□□□ 0.75
ATG4D-205ENST00000586477 APOBEC3FQ8IUX4 373 aaKnown RBP19.72■□□□□ 0.75
ATG4D-205ENST00000586477 TTF2Q9UNY4 1162 aaKnown RBP19.72■□□□□ 0.75
ATG4D-205ENST00000586477 APBB1O00213 710 aa19.71■□□□□ 0.75
ATG4D-205ENST00000586477 ANKRD45Q5TZF3 282 aa19.71■□□□□ 0.75
ATG4D-205ENST00000586477 SERPINA10Q9UK55 444 aa19.71■□□□□ 0.75
ATG4D-205ENST00000586477 CASP8AP2Q9UKL3 1982 aa19.71■□□□□ 0.75
ATG4D-205ENST00000586477 UBE2Q2LH0YL09 131 aa19.7■□□□□ 0.74
ATG4D-205ENST00000586477 SLC10A3P09131 477 aa19.7■□□□□ 0.74
ATG4D-205ENST00000586477 IFIT2P09913 472 aaKnown RBP19.7■□□□□ 0.74
ATG4D-205ENST00000586477 ADORA1P30542 326 aa19.7■□□□□ 0.74
ATG4D-205ENST00000586477 FKBP1BP68106 108 aa19.7■□□□□ 0.74
ATG4D-205ENST00000586477 NUCB1Q02818 461 aa19.7■□□□□ 0.74
ATG4D-205ENST00000586477 NOGQ13253 232 aa19.7■□□□□ 0.74
ATG4D-205ENST00000586477 DEFB129Q9H1M3 183 aa19.7■□□□□ 0.74
ATG4D-205ENST00000586477 FZD1Q9UP38 647 aa19.7■□□□□ 0.74
ATG4D-205ENST00000586477 PHKA1P46020 1223 aa19.69■□□□□ 0.74
ATG4D-205ENST00000586477 CRKP46108 304 aa19.69■□□□□ 0.74
ATG4D-205ENST00000586477 ZNF157P51786 506 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-205ENST00000586477 TNNI3KQ59H18 835 aa19.69■□□□□ 0.74
ATG4D-205ENST00000586477 CHD1LQ86WJ1 897 aa19.69■□□□□ 0.74
ATG4D-205ENST00000586477 RASAL3Q86YV0 1011 aa19.69■□□□□ 0.74
ATG4D-205ENST00000586477 GPATCH3Q96I76 525 aa19.69■□□□□ 0.74
ATG4D-205ENST00000586477 FPGT-TNNI3KV9GXZ4 949 aa19.69■□□□□ 0.74
ATG4D-205ENST00000586477 A0A1B0GUL7 405 aa19.68■□□□□ 0.74
ATG4D-205ENST00000586477 SPDYE2Q495Y8 402 aa19.68■□□□□ 0.74
ATG4D-205ENST00000586477 AACSQ86V21 672 aa19.68■□□□□ 0.74
ATG4D-205ENST00000586477 TBC1D22AQ8WUA7 517 aa19.68■□□□□ 0.74
ATG4D-205ENST00000586477 TDRD3Q9H7E2 651 aaKnown RBP19.68■□□□□ 0.74
ATG4D-205ENST00000586477 ZNF70Q9UC06 446 aaPredicted RBP19.68■□□□□ 0.74
ATG4D-205ENST00000586477 FRAT2O75474 233 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-205ENST00000586477 RBM5P52756 815 aaKnown RBP eCLIP19.67■□□□□ 0.74
ATG4D-205ENST00000586477 TIMM10P62072 90 aa19.67■□□□□ 0.74
ATG4D-205ENST00000586477 KIF23Q02241 960 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-205ENST00000586477 GORABQ5T7V8 394 aa19.67■□□□□ 0.74
ATG4D-205ENST00000586477 CCDC102AQ96A19 550 aa19.67■□□□□ 0.74
ATG4D-205ENST00000586477 NEUROD6Q96NK8 337 aa19.67■□□□□ 0.74
ATG4D-205ENST00000586477 VEZTQ9HBM0 779 aa19.67■□□□□ 0.74
ATG4D-205ENST00000586477 IL1RAPL2Q9NP60 686 aa19.67■□□□□ 0.74
ATG4D-205ENST00000586477 TSKSQ9UJT2 592 aa19.67■□□□□ 0.74
ATG4D-205ENST00000586477 CA12O43570 354 aa19.66■□□□□ 0.74
ATG4D-205ENST00000586477 CDAN1Q8IWY9 1227 aa19.66■□□□□ 0.74
ATG4D-205ENST00000586477 GNL3LQ9NVN8 582 aaKnown RBP19.66■□□□□ 0.74
ATG4D-205ENST00000586477 OTOFQ9HC10 1997 aa19.65■□□□□ 0.74
ATG4D-205ENST00000586477 ZBTB22O15209 634 aa19.65■□□□□ 0.74
ATG4D-205ENST00000586477 HDLBPQ00341 1268 aaKnown RBP19.65■□□□□ 0.74
ATG4D-205ENST00000586477 PRKG1Q13976 671 aa19.65■□□□□ 0.74
ATG4D-205ENST00000586477 RASA3Q14644 834 aa19.65■□□□□ 0.74
ATG4D-205ENST00000586477 CCDC158Q5M9N0 1113 aa19.65■□□□□ 0.74
ATG4D-205ENST00000586477 LDLRAD1Q5T700 205 aa19.65■□□□□ 0.74
ATG4D-205ENST00000586477 NBPF12Q5TAG4 269 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-205ENST00000586477 PPP2R3BQ9Y5P8 575 aa19.65■□□□□ 0.74
ATG4D-205ENST00000586477 MYO1BO43795 1136 aa19.64■□□□□ 0.73
ATG4D-205ENST00000586477 CCDC102BQ68D86 513 aa19.64■□□□□ 0.73
ATG4D-205ENST00000586477 APOBEC3HQ6NTF7 200 aaKnown RBP19.64■□□□□ 0.73
ATG4D-205ENST00000586477 EAF2Q96CJ1 260 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-205ENST00000586477 TEPSINQ96N21 525 aa19.64■□□□□ 0.73
ATG4D-205ENST00000586477 CSRNP1Q96S65 589 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms