RNA–Protein interactions for RNA: ENST00000586190.1

CACNA1A-207, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 459 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-207ENST00000586190 WNK4Q96J92 1243 aa23.06■■□□□ 1.28
CACNA1A-207ENST00000586190 SMC4Q9NTJ3 1288 aa23.06■■□□□ 1.28
CACNA1A-207ENST00000586190 RFX5P48382 616 aaPredicted RBP23.05■■□□□ 1.28
CACNA1A-207ENST00000586190 PUM3Q15397 648 aaKnown RBP23.05■■□□□ 1.28
CACNA1A-207ENST00000586190 KLHDC4Q8TBB5 520 aa23.05■■□□□ 1.28
CACNA1A-207ENST00000586190 CLMNQ96JQ2 1002 aa23.05■■□□□ 1.28
CACNA1A-207ENST00000586190 TDRD3Q9H7E2 651 aaKnown RBP23.05■■□□□ 1.28
CACNA1A-207ENST00000586190 SUGT1Q9Y2Z0 365 aa23.05■■□□□ 1.28
CACNA1A-207ENST00000586190 ANKRD13AQ8IZ07 590 aa23.04■■□□□ 1.28
CACNA1A-207ENST00000586190 TEPSINQ96N21 525 aa23.04■■□□□ 1.28
CACNA1A-207ENST00000586190 FBXO3Q9UK99 471 aa23.04■■□□□ 1.28
CACNA1A-207ENST00000586190 EYA2O00167 538 aa23.03■■□□□ 1.28
CACNA1A-207ENST00000586190 IFIT1P09914 478 aaKnown RBP23.03■■□□□ 1.28
CACNA1A-207ENST00000586190 IFNL1Q8IU54 200 aa23.03■■□□□ 1.28
CACNA1A-207ENST00000586190 OTOFQ9HC10 1997 aa23.03■■□□□ 1.28
CACNA1A-207ENST00000586190 CCER2I3L3R5 266 aa23.02■■□□□ 1.28
CACNA1A-207ENST00000586190 FRAT2O75474 233 aaPredicted RBP23.02■■□□□ 1.28
CACNA1A-207ENST00000586190 TNNI2P48788 182 aa23.02■■□□□ 1.28
CACNA1A-207ENST00000586190 BCAMP50895 628 aa23.02■■□□□ 1.28
CACNA1A-207ENST00000586190 GRIK5Q16478 980 aa23.02■■□□□ 1.28
CACNA1A-207ENST00000586190 IQSEC3Q9UPP2 1182 aaPredicted RBP23.02■■□□□ 1.28
CACNA1A-207ENST00000586190 FKTNO75072 461 aa23.01■■□□□ 1.27
CACNA1A-207ENST00000586190 CHAF1AQ13111 956 aaPredicted RBP23.01■■□□□ 1.27
CACNA1A-207ENST00000586190 LPIN2Q92539 896 aa23.01■■□□□ 1.27
CACNA1A-207ENST00000586190 TEKT1Q969V4 418 aa23.01■■□□□ 1.27
CACNA1A-207ENST00000586190 MYH13Q9UKX3 1938 aa23.01■■□□□ 1.27
CACNA1A-207ENST00000586190 MAST3O60307 1309 aa23.01■■□□□ 1.27
CACNA1A-207ENST00000586190 ZDHHC15Q96MV8 337 aa23■■□□□ 1.27
CACNA1A-207ENST00000586190 API5Q9BZZ5 524 aaKnown RBP23■■□□□ 1.27
CACNA1A-207ENST00000586190 R3HDMLQ9H3Y0 253 aa23■■□□□ 1.27
CACNA1A-207ENST00000586190 HPS5Q9UPZ3 1129 aa23■■□□□ 1.27
CACNA1A-207ENST00000586190 HDAC5Q9UQL6 1122 aa23■■□□□ 1.27
CACNA1A-207ENST00000586190 TESPA1A2RU30 521 aaPredicted RBP22.99■■□□□ 1.27
CACNA1A-207ENST00000586190 CIAO1O76071 339 aa22.99■■□□□ 1.27
CACNA1A-207ENST00000586190 UBTFL1P0CB47 393 aaPredicted RBP22.99■■□□□ 1.27
CACNA1A-207ENST00000586190 SLC5A1P13866 664 aa22.99■■□□□ 1.27
CACNA1A-207ENST00000586190 FKBP1CQ5VVH2 108 aa22.99■■□□□ 1.27
CACNA1A-207ENST00000586190 ATG9AQ7Z3C6 839 aa22.99■■□□□ 1.27
CACNA1A-207ENST00000586190 NOB1Q9ULX3 412 aaKnown RBP22.99■■□□□ 1.27
CACNA1A-207ENST00000586190 TCP10L2B9ZVM9 353 aa22.98■■□□□ 1.27
CACNA1A-207ENST00000586190 IGF2BP3O00425 579 aaKnown RBP eCLIP22.98■■□□□ 1.27
CACNA1A-207ENST00000586190 GJA5P36382 358 aa22.98■■□□□ 1.27
CACNA1A-207ENST00000586190 OTUD7BQ6GQQ9 843 aa22.98■■□□□ 1.27
CACNA1A-207ENST00000586190 HHIPL2Q6UWX4 724 aa22.98■■□□□ 1.27
CACNA1A-207ENST00000586190 TMEM39BQ9GZU3 492 aa22.98■■□□□ 1.27
CACNA1A-207ENST00000586190 ZBTB22O15209 634 aa22.97■■□□□ 1.27
CACNA1A-207ENST00000586190 FBXO46Q6PJ61 603 aaPredicted RBP22.97■■□□□ 1.27
CACNA1A-207ENST00000586190 FAM83AQ86UY5 434 aa22.97■■□□□ 1.27
CACNA1A-207ENST00000586190 WDR66Q8TBY9 1149 aa22.97■■□□□ 1.27
CACNA1A-207ENST00000586190 TNRC18O15417 2968 aaPredicted RBP22.96■■□□□ 1.27
CACNA1A-207ENST00000586190 APOBEC3HQ6NTF7 200 aaKnown RBP22.96■■□□□ 1.27
CACNA1A-207ENST00000586190 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.96■■□□□ 1.27
CACNA1A-207ENST00000586190 CDAN1Q8IWY9 1227 aa22.96■■□□□ 1.27
CACNA1A-207ENST00000586190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.96■■□□□ 1.27
CACNA1A-207ENST00000586190 ARHGAP45Q92619 1136 aa22.96■■□□□ 1.27
CACNA1A-207ENST00000586190 MAP3K9P80192 1104 aa22.95■■□□□ 1.26
CACNA1A-207ENST00000586190 OPTNQ96CV9 577 aa22.95■■□□□ 1.26
CACNA1A-207ENST00000586190 TMOD2Q9NZR1 351 aa22.95■■□□□ 1.26
CACNA1A-207ENST00000586190 RPAP1Q9BWH6 1393 aaPredicted RBP22.94■■□□□ 1.26
CACNA1A-207ENST00000586190 RARSP54136 660 aaKnown RBP22.94■■□□□ 1.26
CACNA1A-207ENST00000586190 SOX10P56693 466 aa22.94■■□□□ 1.26
CACNA1A-207ENST00000586190 HOOK2Q96ED9 719 aa22.94■■□□□ 1.26
CACNA1A-207ENST00000586190 MS4A4AQ96JQ5 239 aa22.94■■□□□ 1.26
CACNA1A-207ENST00000586190 ELP3Q9H9T3 547 aa22.94■■□□□ 1.26
CACNA1A-207ENST00000586190 CEP126Q9P2H0 1117 aa22.94■■□□□ 1.26
CACNA1A-207ENST00000586190 PDE4DIPQ5VU43 2346 aa22.94■■□□□ 1.26
CACNA1A-207ENST00000586190 IL15P40933 162 aaPredicted RBP22.93■■□□□ 1.26
CACNA1A-207ENST00000586190 PTPN18Q99952 460 aa22.93■■□□□ 1.26
CACNA1A-207ENST00000586190 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.93■■□□□ 1.26
CACNA1A-207ENST00000586190 VGLL4Q14135 290 aa22.92■■□□□ 1.26
CACNA1A-207ENST00000586190 ATP2B3Q16720 1220 aa22.92■■□□□ 1.26
CACNA1A-207ENST00000586190 COPRSQ9NQ92 184 aa22.92■■□□□ 1.26
CACNA1A-207ENST00000586190 GNL3LQ9NVN8 582 aaKnown RBP22.92■■□□□ 1.26
CACNA1A-207ENST00000586190 CSADQ9Y600 493 aa22.92■■□□□ 1.26
CACNA1A-207ENST00000586190 LRRFIP2Q9Y608 721 aaKnown RBP22.92■■□□□ 1.26
CACNA1A-207ENST00000586190 SALL1Q9NSC2 1324 aa22.91■■□□□ 1.26
CACNA1A-207ENST00000586190 SEMA3EO15041 775 aa22.91■■□□□ 1.26
CACNA1A-207ENST00000586190 CACNB3P54284 484 aa22.91■■□□□ 1.26
CACNA1A-207ENST00000586190 CRHR2Q13324 411 aa22.91■■□□□ 1.26
CACNA1A-207ENST00000586190 INTS3Q68E01 1043 aaKnown RBP22.91■■□□□ 1.26
CACNA1A-207ENST00000586190 SIL1Q9H173 461 aa22.91■■□□□ 1.26
CACNA1A-207ENST00000586190 GTF2A2P52657 109 aa22.9■■□□□ 1.26
CACNA1A-207ENST00000586190 ERO1AQ96HE7 468 aa22.9■■□□□ 1.26
CACNA1A-207ENST00000586190 SPDYE5A6NIY4 337 aa22.89■■□□□ 1.25
CACNA1A-207ENST00000586190 MEIS3Q99687 375 aa22.89■■□□□ 1.25
CACNA1A-207ENST00000586190 GNAI3P08754 354 aa22.88■■□□□ 1.25
CACNA1A-207ENST00000586190 DCAF15Q66K64 600 aa22.88■■□□□ 1.25
CACNA1A-207ENST00000586190 OTOP1Q7RTM1 612 aa22.88■■□□□ 1.25
CACNA1A-207ENST00000586190 CNKSR2Q8WXI2 1034 aa22.88■■□□□ 1.25
CACNA1A-207ENST00000586190 BRI3BPQ8WY22 251 aa22.88■■□□□ 1.25
CACNA1A-207ENST00000586190 DENND2AQ9ULE3 1009 aa22.88■■□□□ 1.25
CACNA1A-207ENST00000586190 DAGLAQ9Y4D2 1042 aa22.88■■□□□ 1.25
CACNA1A-207ENST00000586190 MTX1Q13505 466 aa22.87■■□□□ 1.25
CACNA1A-207ENST00000586190 ERO1BQ86YB8 467 aa22.87■■□□□ 1.25
CACNA1A-207ENST00000586190 FAM151AQ8WW52 585 aa22.87■■□□□ 1.25
CACNA1A-207ENST00000586190 PA2G4Q9UQ80 394 aaKnown RBP22.87■■□□□ 1.25
CACNA1A-207ENST00000586190 TRIM17Q9Y577 477 aa22.87■■□□□ 1.25
CACNA1A-207ENST00000586190 SNCAIPQ9Y6H5 919 aa22.87■■□□□ 1.25
CACNA1A-207ENST00000586190 HTTP42858 3142 aa22.87■■□□□ 1.25
CACNA1A-207ENST00000586190 CCL15-CCL14A0A0B4J2E2 113 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms