RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 MROH5Q6ZUA9 1318 aa18.27■□□□□ 0.52
SDF2-202ENST00000585428 CRHR2Q13324 411 aa18.27■□□□□ 0.52
SDF2-202ENST00000585428 GRIK5Q16478 980 aa18.27■□□□□ 0.52
SDF2-202ENST00000585428 INTS3Q68E01 1043 aaKnown RBP18.27■□□□□ 0.52
SDF2-202ENST00000585428 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.27■□□□□ 0.52
SDF2-202ENST00000585428 MRIQ9BWK5 157 aa18.27■□□□□ 0.52
SDF2-202ENST00000585428 CRKP46108 304 aa18.26■□□□□ 0.51
SDF2-202ENST00000585428 HDLBPQ00341 1268 aaKnown RBP18.26■□□□□ 0.51
SDF2-202ENST00000585428 LRRC24Q50LG9 513 aa18.26■□□□□ 0.51
SDF2-202ENST00000585428 CDAN1Q8IWY9 1227 aa18.26■□□□□ 0.51
SDF2-202ENST00000585428 OPTNQ96CV9 577 aa18.26■□□□□ 0.51
SDF2-202ENST00000585428 ERO1AQ96HE7 468 aa18.26■□□□□ 0.51
SDF2-202ENST00000585428 BICC1Q9H694 974 aaKnown RBP18.26■□□□□ 0.51
SDF2-202ENST00000585428 PTPN22Q9Y2R2 807 aa18.26■□□□□ 0.51
SDF2-202ENST00000585428 HTTP42858 3142 aa18.26■□□□□ 0.51
SDF2-202ENST00000585428 TCP10L2B9ZVM9 353 aa18.25■□□□□ 0.51
SDF2-202ENST00000585428 MAP3K9P80192 1104 aa18.25■□□□□ 0.51
SDF2-202ENST00000585428 CAP1Q01518 475 aa18.25■□□□□ 0.51
SDF2-202ENST00000585428 ANKRD44Q8N8A2 993 aa18.25■□□□□ 0.51
SDF2-202ENST00000585428 VGLL2Q8N8G2 317 aa18.25■□□□□ 0.51
SDF2-202ENST00000585428 TMEM39BQ9GZU3 492 aa18.25■□□□□ 0.51
SDF2-202ENST00000585428 ELP3Q9H9T3 547 aa18.25■□□□□ 0.51
SDF2-202ENST00000585428 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
SDF2-202ENST00000585428 PDE8BO95263 885 aa18.24■□□□□ 0.51
SDF2-202ENST00000585428 SP3Q02447 781 aa18.24■□□□□ 0.51
SDF2-202ENST00000585428 FAM9BQ8IZU0 186 aa18.24■□□□□ 0.51
SDF2-202ENST00000585428 MRPL50Q8N5N7 158 aaKnown RBP18.24■□□□□ 0.51
SDF2-202ENST00000585428 CD99L2Q8TCZ2 262 aa18.24■□□□□ 0.51
SDF2-202ENST00000585428 CAVIN4Q5BKX8 364 aa18.23■□□□□ 0.51
SDF2-202ENST00000585428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.23■□□□□ 0.51
SDF2-202ENST00000585428 TBC1D22AQ8WUA7 517 aa18.23■□□□□ 0.51
SDF2-202ENST00000585428 IQSEC3Q9UPP2 1182 aaPredicted RBP18.23■□□□□ 0.51
SDF2-202ENST00000585428 POTEFA5A3E0 1075 aa18.22■□□□□ 0.51
SDF2-202ENST00000585428 TNNI2P48788 182 aa18.22■□□□□ 0.51
SDF2-202ENST00000585428 BCAMP50895 628 aa18.22■□□□□ 0.51
SDF2-202ENST00000585428 VGLL4Q14135 290 aa18.22■□□□□ 0.51
SDF2-202ENST00000585428 VPS37DQ86XT2 251 aa18.22■□□□□ 0.51
SDF2-202ENST00000585428 BRI3BPQ8WY22 251 aa18.22■□□□□ 0.51
SDF2-202ENST00000585428 USP44Q9H0E7 712 aa18.22■□□□□ 0.51
SDF2-202ENST00000585428 EFCC1Q9HA90 598 aa18.22■□□□□ 0.51
SDF2-202ENST00000585428 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
SDF2-202ENST00000585428 GTF2A2P52657 109 aa18.21■□□□□ 0.51
SDF2-202ENST00000585428 METTL24Q5JXM2 366 aa18.21■□□□□ 0.51
SDF2-202ENST00000585428 APOBEC3HQ6NTF7 200 aaKnown RBP18.21■□□□□ 0.51
SDF2-202ENST00000585428 ARMC5Q96C12 935 aa18.21■□□□□ 0.51
SDF2-202ENST00000585428 ZDHHC15Q96MV8 337 aa18.21■□□□□ 0.51
SDF2-202ENST00000585428 A0A1B0GUL6 1792 aa18.21■□□□□ 0.51
SDF2-202ENST00000585428 MKI67P46013 3256 aaKnown RBP18.21■□□□□ 0.51
SDF2-202ENST00000585428 PDE4DIPQ5VU43 2346 aa18.2■□□□□ 0.5
SDF2-202ENST00000585428 FGFR2P21802 821 aa18.2■□□□□ 0.5
SDF2-202ENST00000585428 CHAF1AQ13111 956 aaPredicted RBP18.2■□□□□ 0.5
SDF2-202ENST00000585428 FKBP1CQ5VVH2 108 aa18.2■□□□□ 0.5
SDF2-202ENST00000585428 FAM83AQ86UY5 434 aa18.2■□□□□ 0.5
SDF2-202ENST00000585428 KLHDC4Q8TBB5 520 aa18.2■□□□□ 0.5
SDF2-202ENST00000585428 TEKT1Q969V4 418 aa18.2■□□□□ 0.5
SDF2-202ENST00000585428 SUGT1Q9Y2Z0 365 aa18.2■□□□□ 0.5
SDF2-202ENST00000585428 CENPFP49454 3210 aa18.2■□□□□ 0.5
SDF2-202ENST00000585428 ECM29Q5VYK3 1845 aa18.19■□□□□ 0.5
SDF2-202ENST00000585428 FRAT2O75474 233 aaPredicted RBP18.19■□□□□ 0.5
SDF2-202ENST00000585428 CACNB3P54284 484 aa18.19■□□□□ 0.5
SDF2-202ENST00000585428 FAM43AQ8N2R8 423 aa18.19■□□□□ 0.5
SDF2-202ENST00000585428 PTPRCP08575 1304 aa18.19■□□□□ 0.5
SDF2-202ENST00000585428 CCL15-CCL14A0A0B4J2E2 113 aa18.18■□□□□ 0.5
SDF2-202ENST00000585428 SPDYE5A6NIY4 337 aa18.18■□□□□ 0.5
SDF2-202ENST00000585428 CCL15Q16663 113 aa18.18■□□□□ 0.5
SDF2-202ENST00000585428 HHIPL2Q6UWX4 724 aa18.18■□□□□ 0.5
SDF2-202ENST00000585428 ZFYVE28Q9HCC9 887 aa18.18■□□□□ 0.5
SDF2-202ENST00000585428 CSADQ9Y600 493 aa18.18■□□□□ 0.5
SDF2-202ENST00000585428 KIF16BQ96L93 1317 aa18.18■□□□□ 0.5
SDF2-202ENST00000585428 LAMB1P07942 1786 aa18.17■□□□□ 0.5
SDF2-202ENST00000585428 RFX5P48382 616 aaPredicted RBP18.17■□□□□ 0.5
SDF2-202ENST00000585428 SSH1Q8WYL5 1049 aa18.17■□□□□ 0.5
SDF2-202ENST00000585428 OTUD5Q96G74 571 aa18.17■□□□□ 0.5
SDF2-202ENST00000585428 SNCAIPQ9Y6H5 919 aa18.17■□□□□ 0.5
SDF2-202ENST00000585428 IFIT1P09914 478 aaKnown RBP18.16■□□□□ 0.5
SDF2-202ENST00000585428 EN2P19622 333 aaPredicted RBP18.16■□□□□ 0.5
SDF2-202ENST00000585428 ARHGEF6Q15052 776 aa18.16■□□□□ 0.5
SDF2-202ENST00000585428 PUM3Q15397 648 aaKnown RBP18.16■□□□□ 0.5
SDF2-202ENST00000585428 TAF1CQ15572 869 aaPredicted RBP18.16■□□□□ 0.5
SDF2-202ENST00000585428 ERO1BQ86YB8 467 aa18.16■□□□□ 0.5
SDF2-202ENST00000585428 ZKSCAN4Q969J2 545 aaPredicted RBP18.16■□□□□ 0.5
SDF2-202ENST00000585428 IRF6O14896 467 aa18.15■□□□□ 0.5
SDF2-202ENST00000585428 TLR2O60603 784 aa18.15■□□□□ 0.5
SDF2-202ENST00000585428 CETPP11597 493 aa18.15■□□□□ 0.5
SDF2-202ENST00000585428 HOOK2Q96ED9 719 aa18.15■□□□□ 0.5
SDF2-202ENST00000585428 ZNF333Q96JL9 665 aa18.15■□□□□ 0.5
SDF2-202ENST00000585428 ZCCHC17Q9NP64 241 aaKnown RBP18.15■□□□□ 0.5
SDF2-202ENST00000585428 BTBD19C9JJ37 291 aa18.14■□□□□ 0.49
SDF2-202ENST00000585428 EYA2O00167 538 aa18.14■□□□□ 0.49
SDF2-202ENST00000585428 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
SDF2-202ENST00000585428 ATG9AQ7Z3C6 839 aa18.14■□□□□ 0.49
SDF2-202ENST00000585428 GCC1Q96CN9 775 aa18.14■□□□□ 0.49
SDF2-202ENST00000585428 WRNIP1Q96S55 665 aa18.14■□□□□ 0.49
SDF2-202ENST00000585428 E9PSI1 815 aa18.13■□□□□ 0.49
SDF2-202ENST00000585428 SLFN5Q08AF3 891 aa18.13■□□□□ 0.49
SDF2-202ENST00000585428 SNAPC2Q13487 334 aa18.13■□□□□ 0.49
SDF2-202ENST00000585428 NBPF11Q86T75 865 aa18.13■□□□□ 0.49
SDF2-202ENST00000585428 WDR66Q8TBY9 1149 aa18.13■□□□□ 0.49
SDF2-202ENST00000585428 LPIN2Q92539 896 aa18.13■□□□□ 0.49
SDF2-202ENST00000585428 TMOD2Q9NZR1 351 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms