RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 TAF7LQ5H9L4 462 aa28.84■■■□□ 2.21
LSM7-203ENST00000585409 AOX1Q06278 1338 aa28.84■■■□□ 2.21
LSM7-203ENST00000585409 RBBP6Q7Z6E9 1792 aaKnown RBP28.83■■■□□ 2.21
LSM7-203ENST00000585409 CLRN2A0PK11 232 aa28.83■■■□□ 2.21
LSM7-203ENST00000585409 MEIS3Q99687 375 aa28.83■■■□□ 2.21
LSM7-203ENST00000585409 BICC1Q9H694 974 aaKnown RBP28.83■■■□□ 2.21
LSM7-203ENST00000585409 ARAP2Q8WZ64 1704 aa28.83■■■□□ 2.21
LSM7-203ENST00000585409 RABL6Q3YEC7 729 aaPredicted RBP28.82■■■□□ 2.2
LSM7-203ENST00000585409 NBPF12Q5TAG4 269 aaPredicted RBP28.82■■■□□ 2.2
LSM7-203ENST00000585409 OTOP1Q7RTM1 612 aa28.82■■■□□ 2.2
LSM7-203ENST00000585409 PLIN1O60240 522 aa28.81■■■□□ 2.2
LSM7-203ENST00000585409 USP2O75604 605 aaPredicted RBP28.81■■■□□ 2.2
LSM7-203ENST00000585409 GNAI2P04899 355 aa28.81■■■□□ 2.2
LSM7-203ENST00000585409 EPHA10Q5JZY3 1008 aa28.81■■■□□ 2.2
LSM7-203ENST00000585409 PANK1Q8TE04 598 aa28.81■■■□□ 2.2
LSM7-203ENST00000585409 DDX19BQ9UMR2 479 aa28.81■■■□□ 2.2
LSM7-203ENST00000585409 TRIM17Q9Y577 477 aa28.81■■■□□ 2.2
LSM7-203ENST00000585409 FAM205AQ6ZU69 1335 aa28.8■■■□□ 2.2
LSM7-203ENST00000585409 RLBP1P12271 317 aa28.8■■■□□ 2.2
LSM7-203ENST00000585409 GJA5P36382 358 aa28.8■■■□□ 2.2
LSM7-203ENST00000585409 VEZTQ9HBM0 779 aa28.8■■■□□ 2.2
LSM7-203ENST00000585409 JAG2Q9Y219 1238 aa28.8■■■□□ 2.2
LSM7-203ENST00000585409 IREB2P48200 963 aaKnown RBP28.79■■■□□ 2.2
LSM7-203ENST00000585409 RASA3Q14644 834 aa28.79■■■□□ 2.2
LSM7-203ENST00000585409 KAZALD1Q96I82 304 aa28.79■■■□□ 2.2
LSM7-203ENST00000585409 ZNF594Q96JF6 807 aaPredicted RBP28.79■■■□□ 2.2
LSM7-203ENST00000585409 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.79■■■□□ 2.2
LSM7-203ENST00000585409 LRRFIP2Q9Y608 721 aaKnown RBP28.79■■■□□ 2.2
LSM7-203ENST00000585409 RRP1P56182 461 aaKnown RBP28.78■■■□□ 2.2
LSM7-203ENST00000585409 MVPQ14764 893 aaKnown RBP28.78■■■□□ 2.2
LSM7-203ENST00000585409 LDHAL6AQ6ZMR3 332 aa28.78■■■□□ 2.2
LSM7-203ENST00000585409 TESPA1A2RU30 521 aaPredicted RBP28.77■■■□□ 2.2
LSM7-203ENST00000585409 ANKRD13AQ8IZ07 590 aa28.77■■■□□ 2.2
LSM7-203ENST00000585409 CENPFP49454 3210 aa28.77■■■□□ 2.2
LSM7-203ENST00000585409 MKI67P46013 3256 aaKnown RBP28.76■■■□□ 2.19
LSM7-203ENST00000585409 RBM5P52756 815 aaKnown RBP eCLIP28.76■■■□□ 2.19
LSM7-203ENST00000585409 CRHR2Q13324 411 aa28.76■■■□□ 2.19
LSM7-203ENST00000585409 ANKRD44Q8N8A2 993 aa28.76■■■□□ 2.19
LSM7-203ENST00000585409 TDRD7Q8NHU6 1098 aaKnown RBP28.76■■■□□ 2.19
LSM7-203ENST00000585409 ERO1AQ96HE7 468 aa28.76■■■□□ 2.19
LSM7-203ENST00000585409 SPDYE2Q495Y8 402 aa28.75■■■□□ 2.19
LSM7-203ENST00000585409 OTUD7BQ6GQQ9 843 aa28.75■■■□□ 2.19
LSM7-203ENST00000585409 PTPN18Q99952 460 aa28.75■■■□□ 2.19
LSM7-203ENST00000585409 CNNM1Q9NRU3 951 aa28.75■■■□□ 2.19
LSM7-203ENST00000585409 SERPINA10Q9UK55 444 aa28.75■■■□□ 2.19
LSM7-203ENST00000585409 PTPN22Q9Y2R2 807 aa28.75■■■□□ 2.19
LSM7-203ENST00000585409 ZBTB7BO15156 539 aaPredicted RBP28.74■■■□□ 2.19
LSM7-203ENST00000585409 TNFAIP1Q13829 316 aa28.74■■■□□ 2.19
LSM7-203ENST00000585409 ZNF70Q9UC06 446 aaPredicted RBP28.74■■■□□ 2.19
LSM7-203ENST00000585409 COG6Q9Y2V7 657 aa28.74■■■□□ 2.19
LSM7-203ENST00000585409 KIAA0100Q14667 2235 aaKnown RBP28.73■■■□□ 2.19
LSM7-203ENST00000585409 UBE4AQ14139 1066 aa28.73■■■□□ 2.19
LSM7-203ENST00000585409 MFSD14BQ5SR56 506 aa28.73■■■□□ 2.19
LSM7-203ENST00000585409 CD99L2Q8TCZ2 262 aa28.73■■■□□ 2.19
LSM7-203ENST00000585409 POTEFA5A3E0 1075 aa28.72■■■□□ 2.19
LSM7-203ENST00000585409 TEPSINQ96N21 525 aa28.72■■■□□ 2.19
LSM7-203ENST00000585409 TTF2Q9UNY4 1162 aaKnown RBP28.72■■■□□ 2.19
LSM7-203ENST00000585409 OPTNQ96CV9 577 aa28.71■■■□□ 2.19
LSM7-203ENST00000585409 MS4A4AQ96JQ5 239 aa28.71■■■□□ 2.19
LSM7-203ENST00000585409 FAM84BQ96KN1 310 aaPredicted RBP28.71■■■□□ 2.19
LSM7-203ENST00000585409 TDRD3Q9H7E2 651 aaKnown RBP28.71■■■□□ 2.19
LSM7-203ENST00000585409 HIBADHP31937 336 aaKnown RBP28.7■■■□□ 2.18
LSM7-203ENST00000585409 GYG1P46976 350 aa28.7■■■□□ 2.18
LSM7-203ENST00000585409 CAP1Q01518 475 aa28.7■■■□□ 2.18
LSM7-203ENST00000585409 ARMC5Q96C12 935 aa28.7■■■□□ 2.18
LSM7-203ENST00000585409 ELP3Q9H9T3 547 aa28.7■■■□□ 2.18
LSM7-203ENST00000585409 SP3Q02447 781 aa28.69■■■□□ 2.18
LSM7-203ENST00000585409 MTX1Q13505 466 aa28.69■■■□□ 2.18
LSM7-203ENST00000585409 CDAN1Q8IWY9 1227 aa28.69■■■□□ 2.18
LSM7-203ENST00000585409 GCC1Q96CN9 775 aa28.69■■■□□ 2.18
LSM7-203ENST00000585409 FBXO3Q9UK99 471 aa28.69■■■□□ 2.18
LSM7-203ENST00000585409 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.68■■■□□ 2.18
LSM7-203ENST00000585409 PUS3Q9BZE2 481 aaKnown RBP28.68■■■□□ 2.18
LSM7-203ENST00000585409 EFCC1Q9HA90 598 aa28.68■■■□□ 2.18
LSM7-203ENST00000585409 SRGAP3O43295 1099 aa28.67■■■□□ 2.18
LSM7-203ENST00000585409 BRCA2P51587 3418 aa28.67■■■□□ 2.18
LSM7-203ENST00000585409 CRKP46108 304 aa28.66■■■□□ 2.18
LSM7-203ENST00000585409 C20orf194Q5TEA3 1177 aa28.66■■■□□ 2.18
LSM7-203ENST00000585409 RIPOR2Q9Y4F9 1068 aa28.66■■■□□ 2.18
LSM7-203ENST00000585409 MROH5Q6ZUA9 1318 aa28.66■■■□□ 2.18
LSM7-203ENST00000585409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.65■■■□□ 2.181e-14■■■□□ 16.2
LSM7-203ENST00000585409 CNKSR2Q8WXI2 1034 aa28.65■■■□□ 2.18
LSM7-203ENST00000585409 BRI3BPQ8WY22 251 aa28.65■■■□□ 2.18
LSM7-203ENST00000585409 TMEM39BQ9GZU3 492 aa28.65■■■□□ 2.18
LSM7-203ENST00000585409 TCP10L2B9ZVM9 353 aa28.64■■■□□ 2.18
LSM7-203ENST00000585409 VGLL4Q14135 290 aa28.64■■■□□ 2.18
LSM7-203ENST00000585409 MAP3K9P80192 1104 aa28.63■■■□□ 2.17
LSM7-203ENST00000585409 GRIK5Q16478 980 aa28.63■■■□□ 2.17
LSM7-203ENST00000585409 FBXO33Q7Z6M2 555 aa28.63■■■□□ 2.17
LSM7-203ENST00000585409 EYA2O00167 538 aa28.62■■■□□ 2.17
LSM7-203ENST00000585409 RFX5P48382 616 aaPredicted RBP28.62■■■□□ 2.17
LSM7-203ENST00000585409 TNNI2P48788 182 aa28.62■■■□□ 2.17
LSM7-203ENST00000585409 GTF2A2P52657 109 aa28.62■■■□□ 2.17
LSM7-203ENST00000585409 ATP8B2P98198 1209 aa28.62■■■□□ 2.17
LSM7-203ENST00000585409 HDLBPQ00341 1268 aaKnown RBP28.62■■■□□ 2.17
LSM7-203ENST00000585409 COPRSQ9NQ92 184 aa28.62■■■□□ 2.17
LSM7-203ENST00000585409 ZBTB40Q9NUA8 1239 aa28.62■■■□□ 2.17
LSM7-203ENST00000585409 CCL15-CCL14A0A0B4J2E2 113 aa28.61■■■□□ 2.17
LSM7-203ENST00000585409 CIAO1O76071 339 aa28.61■■■□□ 2.17
LSM7-203ENST00000585409 CCL15Q16663 113 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms