RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 SRCIN1Q9C0H9 1055 aa13.52□□□□□ -0.25
CSNK1D-226ENST00000585026 TDRD3Q9H7E2 651 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-226ENST00000585026 SSC5DA1L4H1 1573 aa13.52□□□□□ -0.25
CSNK1D-226ENST00000585026 ZBED9Q6R2W3 1325 aa13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 MROH5Q6ZUA9 1318 aa13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 GJA5P36382 358 aa13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 CRKP46108 304 aa13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 GYG1P46976 350 aa13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 HDLBPQ00341 1268 aaKnown RBP13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 TAF1CQ15572 869 aaPredicted RBP13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 CAVIN4Q5BKX8 364 aa13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 SLC4A10Q6U841 1118 aa13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 FAM84BQ96KN1 310 aaPredicted RBP13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 TMOD2Q9NZR1 351 aa13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 SALL2Q9Y467 1007 aaPredicted RBP13.51□□□□□ -0.25
CSNK1D-226ENST00000585026 CCL15-CCL14A0A0B4J2E2 113 aa13.5□□□□□ -0.25
CSNK1D-226ENST00000585026 POTEFA5A3E0 1075 aa13.5□□□□□ -0.25
CSNK1D-226ENST00000585026 TCP10L2B9ZVM9 353 aa13.5□□□□□ -0.25
CSNK1D-226ENST00000585026 KIF22Q14807 665 aa13.5□□□□□ -0.25
CSNK1D-226ENST00000585026 CCL15Q16663 113 aa13.5□□□□□ -0.25
CSNK1D-226ENST00000585026 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
CSNK1D-226ENST00000585026 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
CSNK1D-226ENST00000585026 PTPN18Q99952 460 aa13.5□□□□□ -0.25
CSNK1D-226ENST00000585026 ZNF646O15015 1829 aaPredicted RBP13.5□□□□□ -0.25
CSNK1D-226ENST00000585026 MAST3O60307 1309 aa13.49□□□□□ -0.25
CSNK1D-226ENST00000585026 CETPP11597 493 aa13.49□□□□□ -0.25
CSNK1D-226ENST00000585026 SLC9C1Q4G0N8 1177 aa13.49□□□□□ -0.25
CSNK1D-226ENST00000585026 HABP4Q5JVS0 413 aaKnown RBP13.49□□□□□ -0.25
CSNK1D-226ENST00000585026 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.49□□□□□ -0.25
CSNK1D-226ENST00000585026 TEKT1Q969V4 418 aa13.49□□□□□ -0.25
CSNK1D-226ENST00000585026 ZCCHC17Q9NP64 241 aaKnown RBP13.49□□□□□ -0.25
CSNK1D-226ENST00000585026 TNRC18O15417 2968 aaPredicted RBP13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 AOX1Q06278 1338 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 ZNF521Q96K83 1311 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 VGLL4Q14135 290 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 SLC4A8Q2Y0W8 1093 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 ERO1BQ86YB8 467 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 BRI3BPQ8WY22 251 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 OTUD5Q96G74 571 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 TEPSINQ96N21 525 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 MRIQ9BWK5 157 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 TMEM39BQ9GZU3 492 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 SUGT1Q9Y2Z0 365 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 RIPOR2Q9Y4F9 1068 aa13.48□□□□□ -0.25
CSNK1D-226ENST00000585026 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 SPDYE5A6NIY4 337 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 GNRH1P01148 92 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 EN2P19622 333 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 CHAF1AQ13111 956 aaPredicted RBP13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 SNAPC2Q13487 334 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 FKBP1CQ5VVH2 108 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 DCAF15Q66K64 600 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 FBXO33Q7Z6M2 555 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 SUCLG2Q96I99 432 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 ZNF333Q96JL9 665 aa13.47□□□□□ -0.25
CSNK1D-226ENST00000585026 PRMT2P55345 433 aa13.46□□□□□ -0.25
CSNK1D-226ENST00000585026 FAM83AQ86UY5 434 aa13.46□□□□□ -0.25
CSNK1D-226ENST00000585026 ZDHHC15Q96MV8 337 aa13.46□□□□□ -0.25
CSNK1D-226ENST00000585026 PUS3Q9BZE2 481 aaKnown RBP13.46□□□□□ -0.25
CSNK1D-226ENST00000585026 KIAA0100Q14667 2235 aaKnown RBP13.45□□□□□ -0.26
CSNK1D-226ENST00000585026 TLR2O60603 784 aa13.45□□□□□ -0.26
CSNK1D-226ENST00000585026 PDE8BO95263 885 aa13.45□□□□□ -0.26
CSNK1D-226ENST00000585026 IFIT1P09914 478 aaKnown RBP13.45□□□□□ -0.26
CSNK1D-226ENST00000585026 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
CSNK1D-226ENST00000585026 WRNIP1Q96S55 665 aa13.45□□□□□ -0.26
CSNK1D-226ENST00000585026 PTCH2Q9Y6C5 1203 aa13.45□□□□□ -0.26
CSNK1D-226ENST00000585026 ECM29Q5VYK3 1845 aa13.45□□□□□ -0.26
CSNK1D-226ENST00000585026 UTYO14607 1347 aa13.44□□□□□ -0.26
CSNK1D-226ENST00000585026 NBPF7P0C2Y1 421 aaPredicted RBP13.44□□□□□ -0.26
CSNK1D-226ENST00000585026 HOXD10P28358 340 aa13.44□□□□□ -0.26
CSNK1D-226ENST00000585026 PPIL2Q13356 520 aa13.44□□□□□ -0.26
CSNK1D-226ENST00000585026 RABL6Q3YEC7 729 aaPredicted RBP13.44□□□□□ -0.26
CSNK1D-226ENST00000585026 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
CSNK1D-226ENST00000585026 FAM43AQ8N2R8 423 aa13.44□□□□□ -0.26
CSNK1D-226ENST00000585026 BICC1Q9H694 974 aaKnown RBP13.44□□□□□ -0.26
CSNK1D-226ENST00000585026 IQSEC3Q9UPP2 1182 aaPredicted RBP13.44□□□□□ -0.26
CSNK1D-226ENST00000585026 KIF16BQ96L93 1317 aa13.43□□□□□ -0.26
CSNK1D-226ENST00000585026 LACTBP83111 547 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-226ENST00000585026 PPATQ06203 517 aa13.43□□□□□ -0.26
CSNK1D-226ENST00000585026 HHIPL2Q6UWX4 724 aa13.43□□□□□ -0.26
CSNK1D-226ENST00000585026 WDR66Q8TBY9 1149 aa13.43□□□□□ -0.26
CSNK1D-226ENST00000585026 KAZALD1Q96I82 304 aa13.43□□□□□ -0.26
CSNK1D-226ENST00000585026 ZNF341Q9BYN7 854 aa13.43□□□□□ -0.26
CSNK1D-226ENST00000585026 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
CSNK1D-226ENST00000585026 BTBD19C9JJ37 291 aa13.42□□□□□ -0.26
CSNK1D-226ENST00000585026 IRF6O14896 467 aa13.42□□□□□ -0.26
CSNK1D-226ENST00000585026 CACNB3P54284 484 aa13.42□□□□□ -0.26
CSNK1D-226ENST00000585026 PUM3Q15397 648 aaKnown RBP13.42□□□□□ -0.26
CSNK1D-226ENST00000585026 LRRC24Q50LG9 513 aa13.42□□□□□ -0.26
CSNK1D-226ENST00000585026 ZKSCAN4Q969J2 545 aaPredicted RBP13.42□□□□□ -0.26
CSNK1D-226ENST00000585026 SNCAIPQ9Y6H5 919 aa13.42□□□□□ -0.26
CSNK1D-226ENST00000585026 RPAP1Q9BWH6 1393 aaPredicted RBP13.42□□□□□ -0.26
CSNK1D-226ENST00000585026 PTPRCP08575 1304 aa13.41□□□□□ -0.26
CSNK1D-226ENST00000585026 SLC5A1P13866 664 aa13.41□□□□□ -0.26
CSNK1D-226ENST00000585026 BCAMP50895 628 aa13.41□□□□□ -0.26
CSNK1D-226ENST00000585026 GRIK5Q16478 980 aa13.41□□□□□ -0.26
CSNK1D-226ENST00000585026 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
CSNK1D-226ENST00000585026 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms